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Protein
Submitted name:

Ribosomal protein S19

Gene

rps19

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
Ribosomal protein S19Imported
Gene namesi
Name:rps19Imported
Encoded oniMitochondrionImported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza

Subcellular locationi

GO - Cellular componenti

  • mitochondrial small ribosomal subunit Source: GO_Central
  • mitochondrion Source: Gramene
Complete GO annotation...

Keywords - Cellular componenti

MitochondrionImported

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Osm1g00450.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S19P family.UniRule annotation

Phylogenomic databases

eggNOGiKOG0899. Eukaryota.
COG0185. LUCA.
HOGENOMiHOG000111560.
KOiK02965.

Family and domain databases

Gene3Di3.30.860.10. 1 hit.
HAMAPiMF_00531. Ribosomal_S19.
InterProiIPR002222. Ribosomal_S19.
IPR005732. Ribosomal_S19_bac-type.
IPR020934. Ribosomal_S19_CS.
IPR023575. Ribosomal_S19_SF.
[Graphical view]
PANTHERiPTHR11880. PTHR11880. 1 hit.
PfamiPF00203. Ribosomal_S19. 1 hit.
[Graphical view]
PIRSFiPIRSF002144. Ribosomal_S19. 1 hit.
PRINTSiPR00975. RIBOSOMALS19.
SUPFAMiSSF54570. SSF54570. 1 hit.
TIGRFAMsiTIGR01050. rpsS_bact. 1 hit.
PROSITEiPS00323. RIBOSOMAL_S19. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P92813-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPRRSIWKGS FVDAFLFRIK KNRESLMSRK IWSRRSSILP EFVDCSVLIY
60 70 80 90
NGKTFVRCKI TEGKVGHKFG EFAFTRRRRP YQTNRGKGRK GKK
Length:93
Mass (Da):11,060
Last modified:September 2, 2008 - v2
Checksum:iF6FBDAE66F0CBD22
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D78336 Genomic DNA. Translation: BAA11351.2.
BA000029 Genomic DNA. Translation: BAC19887.2.
PIRiT03020.
RefSeqiYP_002000582.1. NC_011033.1.

Genome annotation databases

GeneIDi6450135.
KEGGiosa:6450135.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D78336 Genomic DNA. Translation: BAA11351.2.
BA000029 Genomic DNA. Translation: BAC19887.2.
PIRiT03020.
RefSeqiYP_002000582.1. NC_011033.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Osm1g00450.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi6450135.
KEGGiosa:6450135.

Phylogenomic databases

eggNOGiKOG0899. Eukaryota.
COG0185. LUCA.
HOGENOMiHOG000111560.
KOiK02965.

Family and domain databases

Gene3Di3.30.860.10. 1 hit.
HAMAPiMF_00531. Ribosomal_S19.
InterProiIPR002222. Ribosomal_S19.
IPR005732. Ribosomal_S19_bac-type.
IPR020934. Ribosomal_S19_CS.
IPR023575. Ribosomal_S19_SF.
[Graphical view]
PANTHERiPTHR11880. PTHR11880. 1 hit.
PfamiPF00203. Ribosomal_S19. 1 hit.
[Graphical view]
PIRSFiPIRSF002144. Ribosomal_S19. 1 hit.
PRINTSiPR00975. RIBOSOMALS19.
SUPFAMiSSF54570. SSF54570. 1 hit.
TIGRFAMsiTIGR01050. rpsS_bact. 1 hit.
PROSITEiPS00323. RIBOSOMAL_S19. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "A ribosomal protein L2 gene is transcribed, spliced, and edited at one site in rice mitochondria."
    Kubo N., Ozawa K., Hino T., Kadowaki K.
    Plant Mol. Biol. 31:853-862(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Young shootImported.
  2. "The complete sequence of the rice (Oryza sativa L.) mitochondrial genome: frequent DNA sequence acquisition and loss during the evolution of flowering plants."
    Notsu Y., Masood S., Nishikawa T., Kubo N., Akiduki G., Nakazono M., Hirai A., Kadowaki K.
    Mol. Genet. Genomics 268:434-445(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiP92813_ORYSJ
AccessioniPrimary (citable) accession number: P92813
Secondary accession number(s): Q8HCN6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: September 2, 2008
Last modified: June 8, 2016
This is version 102 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.