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Protein
Submitted name:

Ccl1

Gene

ccmFN1

Organism
Brassica napus (Rape)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Ccl1Imported
Submitted name:
Cytochrome c biogenesis ccmFImported
Gene namesi
Name:ccmFN1Imported
Encoded oniMitochondrionImported
OrganismiBrassica napus (Rape)Imported
Taxonomic identifieri3708 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeBrassiceaeBrassica

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei6 – 2217HelicalSequence analysisAdd
BLAST
Transmembranei29 – 5224HelicalSequence analysisAdd
BLAST
Transmembranei81 – 9919HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane, MitochondrionImported

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini74 – 14269Cytochrom_C_asmInterPro annotationAdd
BLAST
Domaini229 – 29466Cytochrom_C_asmInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

InterProiIPR002541. Cyt_c_assembly.
IPR003567. Cyt_c_biogenesis.
IPR003569. Cyt_c_biogenesis_plant.
[Graphical view]
PANTHERiPTHR30009:SF0. PTHR30009:SF0. 2 hits.
PfamiPF01578. Cytochrom_C_asm. 2 hits.
[Graphical view]
PRINTSiPR01410. CCBIOGENESIS.
PR01412. CCBSBIOGNSIS.

Sequencei

Sequence statusi: Complete.

P92585-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSIYEFFHYS LFLGLFVAFT YNKKQPPAFG AALAFWCILL SFLGLLFCHI
60 70 80 90 100
SNNLSNYNVL TANAPFFYQI SGTWSNHEGS ILLWCWILNF YGFFFCYRGR
110 120 130 140 150
PQSHNVLKQG GHRESLFFFF FSNFVKNSIL SLPRYEQESG LKNQLYTPFV
160 170 180 190 200
LRTLVDSELR LRRNRTFDGP ALFYAPLDPE RKMSFAPLDA WRSRGSREGK
210 220 230 240 250
RTHPLLHLAR DDKERASSID EQRIDGALGI ALFFSFFLSA SSDPFVRNFF
260 270 280 290 300
VCTEPLAELN PVLQDPILAI HPPCIYAGDV ASAEGFGLCR SKMMNGIVAL
310 320 330 340 350
HSPPMRKDAA EKNGTLLCSA GCVGSCITSE LFTLKFKHVG AKCYPALLLR
360 370 380
SNRSPLMLLR RRFFAFSSFW TGARSHSTKR Y
Length:381
Mass (Da):43,413
Last modified:January 23, 2007 - v2
Checksum:iAAC85FDCE053FB6D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D84373 Genomic DNA. Translation: BAA12329.2.
AP006444 Genomic DNA. Translation: BAC98892.1.
RefSeqiYP_717143.1. NC_008285.1.

Genome annotation databases

GeneIDi4237879.
KEGGibna:4237879.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D84373 Genomic DNA. Translation: BAA12329.2.
AP006444 Genomic DNA. Translation: BAC98892.1.
RefSeqiYP_717143.1. NC_008285.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi4237879.
KEGGibna:4237879.

Family and domain databases

InterProiIPR002541. Cyt_c_assembly.
IPR003567. Cyt_c_biogenesis.
IPR003569. Cyt_c_biogenesis_plant.
[Graphical view]
PANTHERiPTHR30009:SF0. PTHR30009:SF0. 2 hits.
PfamiPF01578. Cytochrom_C_asm. 2 hits.
[Graphical view]
PRINTSiPR01410. CCBIOGENESIS.
PR01412. CCBSBIOGNSIS.
ProtoNetiSearch...

Entry informationi

Entry nameiP92585_BRANA
AccessioniPrimary (citable) accession number: P92585
Secondary accession number(s): Q6YSP6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: January 23, 2007
Last modified: May 11, 2016
This is version 52 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.