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Protein
Submitted name:

Cytochrome b-large subunit

Gene
N/A
Organism
Ascaris suum (Pig roundworm) (Ascaris lumbricoides)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi131 – 1311Iron (heme axial ligand); via tele nitrogenCombined sources

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

HemeCombined sources, Iron, Metal-binding

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER-18287.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytochrome b-large subunitImported
OrganismiAscaris suum (Pig roundworm) (Ascaris lumbricoides)Imported
Taxonomic identifieri6253 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaAscarididaAscaridoideaAscarididaeAscaris

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei74 – 9825HelicalSequence analysisAdd
BLAST
Transmembranei110 – 13223HelicalSequence analysisAdd
BLAST
Transmembranei152 – 17322HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3VR8X-ray2.81C/G1-188[»]
3VR9X-ray3.01C/G1-188[»]
3VRAX-ray3.44C/G1-188[»]
3VRBX-ray2.91C/G1-188[»]
ProteinModelPortaliP92506.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

InterProiIPR018495. Succ_DH_cyt_bsu_CS.
IPR014314. Succ_DH_cytb556.
IPR000701. Succ_DH_Fumarate_Rdtase_TM-su.
[Graphical view]
PfamiPF01127. Sdh_cyt. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02970. succ_dehyd_cytB. 1 hit.
PROSITEiPS01000. SDH_CYT_1. 1 hit.
PS01001. SDH_CYT_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P92506-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLLPYNATL CRVLRHNVKF IRSVQTSAAR VSAEKTPIQV WGWDYLMRQR
60 70 80 90 100
ALKRPIAPHL TIYKPQMTWM VSGLHRVTGC AMAGTLLIGG VGFSVLPLDF
110 120 130 140 150
TTFVEFIRGL GIPWVILDTF KFIIAFPIAF HTLNGIRFIG FDMAKGTDIP
160 170 180
SIYRGAYLVL GLAALISLAV VVYPRWERHK KATLPTNH
Length:188
Mass (Da):21,141
Last modified:June 7, 2005 - v2
Checksum:i8830E780EB6C4C8E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D78157 mRNA. Translation: BAA11232.2.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D78157 mRNA. Translation: BAA11232.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3VR8X-ray2.81C/G1-188[»]
3VR9X-ray3.01C/G1-188[»]
3VRAX-ray3.44C/G1-188[»]
3VRBX-ray2.91C/G1-188[»]
ProteinModelPortaliP92506.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER-18287.

Family and domain databases

InterProiIPR018495. Succ_DH_cyt_bsu_CS.
IPR014314. Succ_DH_cytb556.
IPR000701. Succ_DH_Fumarate_Rdtase_TM-su.
[Graphical view]
PfamiPF01127. Sdh_cyt. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02970. succ_dehyd_cytB. 1 hit.
PROSITEiPS01000. SDH_CYT_1. 1 hit.
PS01001. SDH_CYT_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiP92506_ASCSU
AccessioniPrimary (citable) accession number: P92506
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: June 7, 2005
Last modified: April 13, 2016
This is version 61 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.