Skip Header

Contribute Send feedback
Read comments (?) or add your own

P92039 (P92039_HAECO) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Acetylcholine receptor alpha subunit EMBL AAB51667.1
Gene names
Name:AChR EMBL AAB51667.1
OrganismHaemonchus contortus (Barber pole worm) EMBL AAB51667.1
Taxonomic identifier6289 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Strongylida › Trichostrongyloidea › Haemonchidae › Haemonchinae › Haemonchus

Protein attributes

Sequence length512 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the ligand-gated ion channel (TC 1.A.9) family. [View classification] RuleBase RU000687

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1919 Potential EMBL AAB51667.1
Chain20 – 512493acetylcholine receptor alpha subunit EMBL AAB51667.1
PRO_5000145150

Sequences

Sequence LengthMass (Da)Tools
P92039 [UniParc].

Last modified May 1, 1997. Version 1.
Checksum: CABE7A264200DB03

FASTA51259,540
        10         20         30         40         50         60 
MRHLLSFVIS FVSFYYIYAN EDAKRLYDDL MVNYNRHRRP ASGPHEPLTI KLKLRLSQII 

        70         80         90        100        110        120 
DVHEIDQIMT CSVWLKQVWI DKKLSWDPES YGGVSVLYVP YEMIWVPDIV LYNNADSNYN 

       130        140        150        160        170        180 
ITISTKATLH YSGEVTWEPP AIFKSMCQID VRWFPFDEQQ CHLKFGSWTN SENLLNLELL 

       190        200        210        220        230        240 
ENNVRYEEEV NEQGIVDNIT IADDGIDLSD YYPSVEWDIM SRVARRRSKN YPSCCPQSAY 

       250        260        270        280        290        300 
IDIMYYLELR RKPLFYTVNL VFPCVGISFL TILVFYLPSD SGEKVTLCIS ILVALTIFFL 

       310        320        330        340        350        360 
LLTEIIPATS ITLPLIGKYL LFTMVMVTLS VVVTVISLNL HFRTPTTHLM PKWVKLVFLK 

       370        380        390        400        410        420 
WLPKVLFMRR PLDDGDESFR RVSSRKGIGP TTFDGKIPLN LHEHRVSRDI GKSLANAAID 

       430        440        450        460        470        480 
ERIQKLYYSP QVVKAFENIC FIAELLKKKD RDDKIDEDWK YVAMVLDRLF LLIFSFACFI 

       490        500        510 
GTVLILLQAP TLYDDRKPID LQYRPANLSA LF

« Hide

References

[1]Hoekstra R.R.
Submitted (SEP-1996) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Characterization of an acetylcholine receptor gene of Haemonchus contortus in relation to levamisole resistance."
Hoekstra R., Visser A., Wiley L.J., Weiss A.S., Sangster N.C., Roos M.H.
Mol. Biochem. Parasitol. 84:179-187(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		U72490 mRNA. Translation: AAB51667.1.

3D structure databases

HSSPHSSP built from PDB template 1OED based on UniProtKB P02711.
ProteinModelPortalP92039.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.70.170.10. 1 hit.
InterProIPR006202. Neur_chan_lig-bd.
IPR006201. Neur_channel.
IPR006029. Neurotrans-gated_channel_TM.
IPR018000. Neurotransmitter_ion_chnl_CS.
IPR002394. Nicotinic_acetylcholine_rcpt.
[Graphical view]
PANTHERPTHR18945. PTHR18945. 1 hit.
PfamPF02931. Neur_chan_LBD. 1 hit.
PF02932. Neur_chan_memb. 1 hit.
[Graphical view]
PRINTSPR00254. NICOTINICR.
PR00252. NRIONCHANNEL.
SUPFAMSSF90112. Neu_channel_TM. 1 hit.
SSF63712. Neur_chan_LBD. 1 hit.
TIGRFAMsTIGR00860. LIC. 1 hit.
PROSITEPS00236. NEUROTR_ION_CHANNEL. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameP92039_HAECO
AccessionPrimary (citable) accession number: P92039
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: April 3, 2013
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info