P92004 (P92004_CAEEL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein TAG-260, isoform a EMBL CAB03208.2

Gene names

Name:	tag-260 WormBase WBGene00010867 WormBase M04G12.1a
ORF Names:	M04G12.1 EMBL CAB03208.2

Organism

Caenorhabditis elegans

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	457 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	growth Inferred from mutant phenotype. Source: WormBase
Molecular function	protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
atf-2	Q21361	3	EBI-316398,EBI-317743
nhr-69	P91829	3	EBI-316398,EBI-322112
nhr-91	Q9U2R6	3	EBI-316398,EBI-316939
ZK849.2a	O18302	3	EBI-316398,EBI-312747

Sequences

	Sequence		Length	Mass (Da)
	P92004 [UniParc]. Last modified March 1, 2003. Version 2. Checksum: 98600118751E79E3	FASTA	457	49,614
	10 20 30 40 50 60 MGSFAESAAL LQASMSLSPT PSIINNNNTV DYSLSLQMLA APNAVSLASV NGSASLLTAT 70 80 90 100 110 120 TAGMKANNNS NEKLPRQQCY LCDLPRWPWA IINDYIEPVC RGCVNYEGSD RIELVLEETR 130 140 150 160 170 180 QQKKLQGVGI SDPQNAKTSL RDITLTQQQP LQTLPVTSAN GIGRISPQRT PQPTVLPTSP 190 200 210 220 230 240 FHVPTMNNLE QVLTHQRLLQ MTQANPRAVD DLIQQSLRSL GPNSHLLAPF MMSMLPSTTY 250 260 270 280 290 300 SNPRKRESDE EQKPEIYGKV QRGDAQTTTA SPTSTHSPDH PGVKDRRGIA PIERVLRCTL 310 320 330 340 350 360 CNERLEDTHF VQCPTVSIHK FCFPCSRSSI KDQCKSSDMY CPSGDKCPLV GSAMPWAFMQ 370 380 390 400 410 420 GEIAQILGDE YDEFKRTREA HGLAPPMGAN AATLAAAAAA AAQLRRRQNA QRAHPHRTLT 430 440 450 RSTINTSTSC NGANQTSPAS TTTSAASSTS AATSPQN

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	Z81103 Genomic DNA. Translation: CAB03208.2.
PIR	T23719.
RefSeq	NP_506317.2. NM_073916.4.
UniGene	Cel.6790.
3D structure databases
ProteinModelPortal	P92004.
SMR	P92004. Positions 296-367.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP-25625N.
IntAct	P92004. 27 interactions.
MINT	MINT-1048705.
STRING	P92004.
Proteomic databases
PRIDE	P92004.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	M04G12.1a; M04G12.1a; M04G12.1.
GeneID	179817.
KEGG	cel:M04G12.1.
NMPDR	fig|6239.3.peg.20264.
UCSC	M04G12.1c.1. c. elegans.
Organism-specific databases
CTD	179817.
WormBase	M04G12.1a; CE32470; WBGene00010867; tag-260.
Phylogenomic databases
eggNOG	meNOG08309.
GeneTree	EMGT00050000001986.
InParanoid	P92004.
OMA	FITPELE.
PhylomeDB	P92004.
Gene expression databases
ArrayExpress	P92004.
Family and domain databases
InterPro	IPR022750. Interferon_reg_fac2-bd1_2_Znf. IPR013083. Znf_RING/FYVE/PHD. [Graphical view]
Gene3D	G3DSA:3.30.40.10. Znf_RING/FYVE/PHD. 1 hit.
Pfam	PF11261. IRF-2BP1_2. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	906984.

Entry information

Entry name

P92004_CAEEL

Accession

Primary (citable) accession number: P92004

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 1997
Last sequence update:	March 1, 2003
Last modified:	January 25, 2012
This is version 74 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)