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Protein

Alpha-amylase

Gene

C50B6.7

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationSAAS annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

ReactomeiR-CEL-189085. Digestion of dietary carbohydrate.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
ORF Names:C50B6.7Imported, CELE_C50B6.7Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiC50B6.7; CE08876; WBGene00008220.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 16Sequence analysisAdd BLAST16
ChainiPRO_500416193817 – 713Alpha-amylaseSequence analysisAdd BLAST697

Proteomic databases

EPDiP91982.
PaxDbiP91982.
PeptideAtlasiP91982.

Expressioni

Gene expression databases

BgeeiWBGene00008220.

Interactioni

Protein-protein interaction databases

STRINGi6239.C50B6.7.

Structurei

3D structure databases

ProteinModelPortaliP91982.
SMRiP91982.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini32 – 418AamyInterPro annotationAdd BLAST387
Domaini427 – 511Aamy_CInterPro annotationAdd BLAST85

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG2212. Eukaryota.
COG0366. LUCA.
GeneTreeiENSGT00390000002882.
HOGENOMiHOG000253313.
InParanoidiP91982.
OMAiDANDWIG.
OrthoDBiEOG091G07V6.
PhylomeDBiP91982.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR031319. A-amylase_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

P91982-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLKHLFLFLF IKSSIAYNFY WYDKTQTLQN RQTMVHLFEW KWADVAKECE
60 70 80 90 100
NFLQYYGYGA VQVSPPMEHL KAFPNNNYPW WVRYQPVSYK LDSRSGNEQE
110 120 130 140 150
FQDMVNRCNK VGVRIIVDIV MNHMVGIGQK SGNGVGSSGS SSFDGTHGVQ
160 170 180 190 200
SFPGVPYSLG DFNNPKCDGD IQGSDYQNSA EHVKDCRLVG LLDLNQASAT
210 220 230 240 250
VRAKIVAYLN KLVDMGVAGF RHDASKHMWP QDILNILNDV KDLRSDIYGS
260 270 280 290 300
NQRPFAVHEV IDRGGEAVKC GDYFGNGRYT NFNFGAAVSA AAKQQSDWKY
310 320 330 340 350
LANLGPGYGY GNNEDHDVLN FIDNHDNQRD SSPYVVTYKD GQKYNLAVGF
360 370 380 390 400
MLAWPYGYPR VMSSFAFSYS DQSPPNSGAS NDYATTSPTF NGDQTCNSNS
410 420 430 440 450
GWVCEHRWPA IRQMAKFRSA VQGTAAADIV TDTRRIAFAR DGKGFFALNQ
460 470 480 490 500
QDGAWTKIFA TNLPAGDYCD HFSGGLDNGK CVGTKITVRD DHTSYLSVPS
510 520 530 540 550
NSIVAISLDS KLTPYTPPAP PSGYSTTVIL LKKDTNPGQN IFVRGGTSQA
560 570 580 590 600
HNGKCSTGPY QQSSDPCAIP MYHATTVPFV FAEYLTWSQQ DNYLDFEGAE
610 620 630 640 650
INQGTHDGAA AFGTPLAYST NDKTAIEYQP YNKYGPGYWI AVLRMDCSKA
660 670 680 690 700
EQGWFEVKGY ETPDIGWEGD IKQGSCSGSV GGSAPFSSIN HVAKCGAVNV
710
FTWGSASCVI DSA
Length:713
Mass (Da):78,658
Last modified:May 1, 1997 - v1
Checksum:i6076FAA0143058F6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB02856.1.
PIRiT20090.
RefSeqiNP_506303.1. NM_073902.3.
UniGeneiCel.4462.

Genome annotation databases

EnsemblMetazoaiC50B6.7; C50B6.7; WBGene00008220.
GeneIDi179813.
KEGGicel:CELE_C50B6.7.
UCSCiC50B6.7. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB02856.1.
PIRiT20090.
RefSeqiNP_506303.1. NM_073902.3.
UniGeneiCel.4462.

3D structure databases

ProteinModelPortaliP91982.
SMRiP91982.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.C50B6.7.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Proteomic databases

EPDiP91982.
PaxDbiP91982.
PeptideAtlasiP91982.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC50B6.7; C50B6.7; WBGene00008220.
GeneIDi179813.
KEGGicel:CELE_C50B6.7.
UCSCiC50B6.7. c. elegans.

Organism-specific databases

CTDi179813.
WormBaseiC50B6.7; CE08876; WBGene00008220.

Phylogenomic databases

eggNOGiKOG2212. Eukaryota.
COG0366. LUCA.
GeneTreeiENSGT00390000002882.
HOGENOMiHOG000253313.
InParanoidiP91982.
OMAiDANDWIG.
OrthoDBiEOG091G07V6.
PhylomeDBiP91982.

Enzyme and pathway databases

ReactomeiR-CEL-189085. Digestion of dietary carbohydrate.

Gene expression databases

BgeeiWBGene00008220.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR031319. A-amylase_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiP91982_CAEEL
AccessioniPrimary (citable) accession number: P91982
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: November 30, 2016
This is version 131 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.