P91579 (P91579_CIOIN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: COS41.1 EMBL CAB06045.1
Organism	Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis) EMBL CAB06045.1
Taxonomic identifier	7719 [NCBI]
Taxonomic lineage	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Tunicata › Ascidiacea › Enterogona › Phlebobranchia › Cionidae › Ciona

Protein attributes

Sequence length	793 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Gene Ontology (GO)
Biological_process	nucleotide-excision repair Inferred from electronic annotation. Source: InterPro
Cellular_component	core TFIIH complex Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro ATP-dependent DNA helicase activity Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	P91579 [UniParc]. Last modified May 1, 1997. Version 1. Checksum: A0EEB6BC9F73BE68	FASTA	793	89,992
	10 20 30 40 50 60 MGKPKVKKGK KRKDPEEDPD FYEDEDDFED DQEVQAKAVP AAAGRNIDSN TNTASSALLD 70 80 90 100 110 120 KFGAKDYRSN MEMKKDHASR PLYLAPDGHI FLESFSPVYK HARDFLIAIS EPICRPKFIH 130 140 150 160 170 180 EFRLTPYSLY AAVSVGLDTE DIIEYLGRLS KTSIPPGIVE FIRLCTQSYG KVKLVLKHNK 190 200 210 220 230 240 YYVESSHVDV IQTLLRDYVI ASCRKAVTEE ENGEATTSGG LQVSTLVSKQ GLQVNKPSNN 250 260 270 280 290 300 AGEGQTAEDQ NESAVPKDIY DFYEQIDKDD ENATEETQVV SFEVNQEMVE TLQKRCIELE 310 320 330 340 350 360 YPLLAEYDFR NDTINKDLKI DLKPTTVLRP YQEKSLRKMF GNGRARSGVI VLPCGAGKTL 370 380 390 400 410 420 VGVTAACTVR KRCMVLCTSG VAVEQWRSQF KMWSTADDSM ICRFTSDAKD RPHGCSIAIS 430 440 450 460 470 480 TYSMMGHSMK RSYESEKVME WIRSQEWGLI VLDEVHTIPA KQFRRVLTVV QSHCKLGLTA 490 500 510 520 530 540 TLVREDDKIS DLNFLIGPKL YEANWMELQN GGFIARVQCA EVWCPMTPEF YREYLSIRSR 550 560 570 580 590 600 KRLLLYVMNP NKFRACQFLV RFHERRNDKI VVFSDNVFAL KEYAVRMGKP YIYGPTTQGE 610 620 630 640 650 660 RLQILQNFIH NPKVNTIFIS KVGDNSIDLP AANVLIQVSS HGGSRRQEAQ RLGRILRAKK 670 680 690 700 710 720 GSLAEEYNAF FYSLVSQDTV EVAYSTKRQR FLVDQGYSFK AITHLTGIDE EEQLAFTTKD 730 740 750 760 770 780 EQHALLQKVL AASDLDAEEE MVPGEFGVGD KGKGGFRRAG AMSSMSGADD SVYMEYRKTK 790 QRKGVHDLFK QFR

References

[1]	"Gene number in an invertebrate chordate, Ciona intestinalis." Simmen M.W., Leitgeb S., Clark V.H., Jones S.J., Bird A. Proc. Natl. Acad. Sci. U.S.A. 95:4437-4440(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Nonmethylated transposable elements and methylated genes in a chordate genome." Simmen M.W., Leitgeb S., Charlton J., Jones S.J., Harris B.R., Clark V.H., Bird A. Science 283:1164-1167(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[3]	Bird A.P., Clark V., Jones S.J.M., Leitgeb S., Dobson R., Tweedie S. Submitted (JUL-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	Z83760 Genomic DNA. Translation: CAB06045.1.
PIR	T31655.
RefSeq	NP_001123567.1. NM_001130095.1.
UniGene	Cin.28452.
3D structure databases
ProteinModelPortal	P91579.
ModBase	Search...
Protein-protein interaction databases
STRING	7719.ENSCINP00000005835.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	100170636.
KEGG	cin:100170636.
Organism-specific databases
CTD	2071.
Phylogenomic databases
eggNOG	COG1061.
HOGENOM	HOG000160172.
HOVERGEN	HBG051499.
InParanoid	P91579.
KO	K10843.
Family and domain databases
InterPro	IPR006935. Helicase/UvrB_dom. IPR014001. Helicase_ATP-bd. IPR001650. Helicase_C. IPR001161. Helicase_Ercc3. [Graphical view]
Pfam	PF00271. Helicase_C. 1 hit. PF04851. ResIII. 1 hit. [Graphical view]
PRINTS	PR00851. XRODRMPGMNTB.
SMART	SM00487. DEXDc. 1 hit. SM00490. HELICc. 1 hit. [Graphical view]
TIGRFAMs	TIGR00603. rad25. 1 hit.
PROSITE	PS51192. HELICASE_ATP_BIND_1. 1 hit. PS51194. HELICASE_CTER. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

P91579_CIOIN

Accession

Primary (citable) accession number: P91579

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 1997
Last sequence update:	May 1, 1997
Last modified:	May 1, 2013
This is version 77 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)