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Protein
Submitted name:

SyNapTotagmin

Gene

snt-4

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
SyNapTotagminImported
Gene namesi
Name:snt-4Imported
ORF Names:CELE_T23H2.2Imported, T23H2.2Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiT23H2.2; CE30456; WBGene00004924; snt-4.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei16 – 3924HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

EPDiP91493.
PaxDbiP91493.
PRIDEiP91493.

Interactioni

Protein-protein interaction databases

DIPiDIP-26376N.
IntActiP91493. 1 interaction.
MINTiMINT-1082483.
STRINGi6239.T23H2.2.

Structurei

3D structure databases

ProteinModelPortaliP91493.
SMRiP91493. Positions 113-380.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini127 – 21993C2InterPro annotationAdd
BLAST
Domaini264 – 35592C2InterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 2 C2 domains.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG1028. Eukaryota.
ENOG410XRME. LUCA.
GeneTreeiENSGT00760000118973.
HOGENOMiHOG000232126.
InParanoidiP91493.
KOiK19904.
OMAiQCLLDPY.
OrthoDBiEOG75J0N2.
PhylomeDBiP91493.

Family and domain databases

Gene3Di2.60.40.150. 2 hits.
InterProiIPR000008. C2_dom.
[Graphical view]
PfamiPF00168. C2. 2 hits.
[Graphical view]
PRINTSiPR00360. C2DOMAIN.
SMARTiSM00239. C2. 2 hits.
[Graphical view]
SUPFAMiSSF49562. SSF49562. 2 hits.
PROSITEiPS50004. C2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P91493-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPHYQEGLAK SAGHEWFYLG VGGAVGLAAL VAVAALLAVR KRRQYPSLLL
60 70 80 90 100
PPRQVIAVRG GFPKGPGGLK QSPSPLQSPL SNDSTPSPVV PLQNLLEDRT
110 120 130 140 150
RKLSPSELPS ERGNISFTLS YDSHTLTLLV SIINCRNLCE MVVSRDGQCL
160 170 180 190 200
LDPYVKLQLL PEREHRVKTR IVRSTTSPVY EEQFAMYGVT HEQVNFATLH
210 220 230 240 250
FQVVAFDRYS RDTVVGECVY RLADAELQVH NEMRVELPLL PRATDTVAAR
260 270 280 290 300
GELLLSLTYQ AAFNNLTVVV LKARGLGGRN DAGTADPFVK LYLRKESGER
310 320 330 340 350
IVKKRTHVRR STLNPVYNES FVFELPDDRL EHSVIDLQVI NHDRVNRNDV
360 370 380
IGRALLNMED SHVVEVLENP GRQVAQWHHL D
Length:381
Mass (Da):42,675
Last modified:June 1, 2002 - v2
Checksum:iF432B383B08CA696
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CCD70771.1.
RefSeqiNP_491853.2. NM_059452.6.
UniGeneiCel.20323.

Genome annotation databases

EnsemblMetazoaiT23H2.2; T23H2.2; WBGene00004924.
GeneIDi172346.
KEGGicel:CELE_T23H2.2.
UCSCiT23H2.2. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CCD70771.1.
RefSeqiNP_491853.2. NM_059452.6.
UniGeneiCel.20323.

3D structure databases

ProteinModelPortaliP91493.
SMRiP91493. Positions 113-380.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-26376N.
IntActiP91493. 1 interaction.
MINTiMINT-1082483.
STRINGi6239.T23H2.2.

Proteomic databases

EPDiP91493.
PaxDbiP91493.
PRIDEiP91493.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiT23H2.2; T23H2.2; WBGene00004924.
GeneIDi172346.
KEGGicel:CELE_T23H2.2.
UCSCiT23H2.2. c. elegans.

Organism-specific databases

CTDi172346.
WormBaseiT23H2.2; CE30456; WBGene00004924; snt-4.

Phylogenomic databases

eggNOGiKOG1028. Eukaryota.
ENOG410XRME. LUCA.
GeneTreeiENSGT00760000118973.
HOGENOMiHOG000232126.
InParanoidiP91493.
KOiK19904.
OMAiQCLLDPY.
OrthoDBiEOG75J0N2.
PhylomeDBiP91493.

Miscellaneous databases

NextBioi875141.

Family and domain databases

Gene3Di2.60.40.150. 2 hits.
InterProiIPR000008. C2_dom.
[Graphical view]
PfamiPF00168. C2. 2 hits.
[Graphical view]
PRINTSiPR00360. C2DOMAIN.
SMARTiSM00239. C2. 2 hits.
[Graphical view]
SUPFAMiSSF49562. SSF49562. 2 hits.
PROSITEiPS50004. C2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiP91493_CAEEL
AccessioniPrimary (citable) accession number: P91493
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: June 1, 2002
Last modified: May 11, 2016
This is version 120 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.