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Protein
Submitted name:

CholecystoKinin Receptor homolog

Gene

ckr-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptorUniRule annotation, Receptor, Transducer

Names & Taxonomyi

Protein namesi
Submitted name:
CholecystoKinin Receptor homologImported
Gene namesi
Name:ckr-1Imported
ORF Names:CELE_T23B3.4Imported, T23B3.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiT23B3.4; CE45656; WBGene00020712; ckr-1.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei12 – 3928HelicalSequence analysisAdd
BLAST
Transmembranei51 – 7424HelicalSequence analysisAdd
BLAST
Transmembranei80 – 11031HelicalSequence analysisAdd
BLAST
Transmembranei131 – 15222HelicalSequence analysisAdd
BLAST
Transmembranei172 – 19423HelicalSequence analysisAdd
BLAST
Transmembranei309 – 32921HelicalSequence analysisAdd
BLAST
Transmembranei349 – 36719HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiP91487.

Interactioni

Protein-protein interaction databases

DIPiDIP-25554N.
MINTiMINT-1041493.
STRINGi6239.T23B3.4.

Structurei

3D structure databases

ProteinModelPortaliP91487.
SMRiP91487. Positions 9-374.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini30 – 364335G_PROTEIN_RECEP_F1_2InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the G-protein coupled receptor 1 family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3656. Eukaryota.
ENOG410XRW9. LUCA.
GeneTreeiENSGT00760000118781.
HOGENOMiHOG000019816.
InParanoidiP91487.
OMAiECSVIIS.
OrthoDBiEOG7BZVSD.
PhylomeDBiP91487.

Family and domain databases

InterProiIPR009126. Cholcskin_rcpt.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view]
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR01822. CCYSTOKININR.
PR00237. GPCRRHODOPSN.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P91487-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPKECSVIIS PYTIMISSIF LLCLILSLLG NAIVILTILG KSHRSRSITN
60 70 80 90 100
FYLLNLAFAD LLRSIICIPS TLLGELTQCW LLGAAMCKIV AFLQPVGVCA
110 120 130 140 150
SAYTLAVIAI ERYYAICRPL ESRKWQTKKR ALITISLVWC FSFSANLTSL
160 170 180 190 200
FLYDANPGKF TCDSTKGPLV DFIYQLYLTF TLLFVPLALM VGLYGNVIIT
210 220 230 240 250
LNTAINSDHP TVEQQMIEKT LPSRASFSDW FVSAVQRVPS MKVVSKTFQF
260 270 280 290 300
KEKNSLSIPQ TSGLSVRPSR SSFSSFFSTP RGSFDVTMLL RSTNQEKILI
310 320 330 340 350
AKKKVTRMLI TLVIVFAFCW VPSYLYWLLL RMAELAATDL WNPGLNSSLT
360 370 380 390 400
IMTYISSLAN PITYCFMNKS FRSSVLAYCR PKPKRPLTRC SALPTRKSPS
410 420
SPTHAIPMIK IDLVLDSSVH I
Length:421
Mass (Da):47,114
Last modified:February 8, 2011 - v4
Checksum:i6F9394FCF6989D89
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CCD64898.1.
RefSeqiNP_491918.3. NM_059517.3.
UniGeneiCel.20324.

Genome annotation databases

EnsemblMetazoaiT23B3.4; T23B3.4; WBGene00020712.
GeneIDi188774.
KEGGicel:CELE_T23B3.4.
UCSCiT23B3.4. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CCD64898.1.
RefSeqiNP_491918.3. NM_059517.3.
UniGeneiCel.20324.

3D structure databases

ProteinModelPortaliP91487.
SMRiP91487. Positions 9-374.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-25554N.
MINTiMINT-1041493.
STRINGi6239.T23B3.4.

Protein family/group databases

GPCRDBiSearch...

Proteomic databases

PaxDbiP91487.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiT23B3.4; T23B3.4; WBGene00020712.
GeneIDi188774.
KEGGicel:CELE_T23B3.4.
UCSCiT23B3.4. c. elegans.

Organism-specific databases

CTDi188774.
WormBaseiT23B3.4; CE45656; WBGene00020712; ckr-1.

Phylogenomic databases

eggNOGiKOG3656. Eukaryota.
ENOG410XRW9. LUCA.
GeneTreeiENSGT00760000118781.
HOGENOMiHOG000019816.
InParanoidiP91487.
OMAiECSVIIS.
OrthoDBiEOG7BZVSD.
PhylomeDBiP91487.

Family and domain databases

InterProiIPR009126. Cholcskin_rcpt.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view]
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR01822. CCYSTOKININR.
PR00237. GPCRRHODOPSN.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiP91487_CAEEL
AccessioniPrimary (citable) accession number: P91487
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: February 8, 2011
Last modified: June 8, 2016
This is version 130 of the entry and version 4 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.