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Protein
Submitted name:

C-type LECtin

Gene

clec-53

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

LectinImported

Protein family/group databases

MEROPSiI63.001.

Names & Taxonomyi

Protein namesi
Submitted name:
C-type LECtinImported
Gene namesi
Name:clec-53Imported
ORF Names:CELE_T03F1.10Imported, T03F1.10Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiT03F1.10; CE38630; WBGene00020191; clec-53.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818Sequence analysisAdd
BLAST
Chaini19 – 308290Sequence analysisPRO_5004161794Add
BLAST

Proteomic databases

PaxDbiP91429.
PRIDEiP91429.

Expressioni

Gene expression databases

BgeeiWBGene00020191.

Structurei

3D structure databases

ProteinModelPortaliP91429.
SMRiP91429. Positions 33-149, 166-303.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini29 – 148120C-type lectinInterPro annotationAdd
BLAST
Domaini175 – 303129C-type lectinInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410KDEC. Eukaryota.
ENOG411016E. LUCA.
GeneTreeiENSGT00720000108514.
HOGENOMiHOG000016499.
InParanoidiP91429.
OMAiSELACEM.
OrthoDBiEOG091G0EGC.
PhylomeDBiP91429.

Family and domain databases

Gene3Di3.10.100.10. 2 hits.
InterProiIPR001304. C-type_lectin.
IPR016186. C-type_lectin-like.
IPR016187. C-type_lectin_fold.
[Graphical view]
PfamiPF00059. Lectin_C. 2 hits.
[Graphical view]
SMARTiSM00034. CLECT. 2 hits.
[Graphical view]
SUPFAMiSSF56436. SSF56436. 2 hits.
PROSITEiPS50041. C_TYPE_LECTIN_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P91429-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRPLILALC LVVHLISAQC GPGSIYQQSN SRCLTLFRAA VNFQTAESIC
60 70 80 90 100
ATLSGHLVSI HNAIDNAFVS SQAQKYMDGG AWIGAQASAP DVTNPLNWYW
110 120 130 140 150
TDGSNFDYQN YKVGQPTPPG STACMQLETG TAKWQTANCT NKLPFICSAA
160 170 180 190 200
ATVVPTCPTI TIPSHCPSGY TWFETTDFCY KTTVQFTNFN DARSACQADG
210 220 230 240 250
GDLASIHSIA ENAFLVGLSK AGITNKDKDW NDDVWIGLVY QNSKWQWTDG
260 270 280 290 300
SVVNYVNWGD GEPNNMNKEW WTALVADPHE GKNSEGTRWN NVPQDDQRAF

LCKIAPLH
Length:308
Mass (Da):33,818
Last modified:July 19, 2005 - v2
Checksum:i5F23412001B3FA75
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CCD67798.1.
PIRiT29200.
RefSeqiNP_491247.2. NM_058846.4.

Genome annotation databases

EnsemblMetazoaiT03F1.10; T03F1.10; WBGene00020191.
GeneIDi171967.
KEGGicel:CELE_T03F1.10.
UCSCiT03F1.10. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CCD67798.1.
PIRiT29200.
RefSeqiNP_491247.2. NM_058846.4.

3D structure databases

ProteinModelPortaliP91429.
SMRiP91429. Positions 33-149, 166-303.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

MEROPSiI63.001.

Proteomic databases

PaxDbiP91429.
PRIDEiP91429.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiT03F1.10; T03F1.10; WBGene00020191.
GeneIDi171967.
KEGGicel:CELE_T03F1.10.
UCSCiT03F1.10. c. elegans.

Organism-specific databases

CTDi171967.
WormBaseiT03F1.10; CE38630; WBGene00020191; clec-53.

Phylogenomic databases

eggNOGiENOG410KDEC. Eukaryota.
ENOG411016E. LUCA.
GeneTreeiENSGT00720000108514.
HOGENOMiHOG000016499.
InParanoidiP91429.
OMAiSELACEM.
OrthoDBiEOG091G0EGC.
PhylomeDBiP91429.

Gene expression databases

BgeeiWBGene00020191.

Family and domain databases

Gene3Di3.10.100.10. 2 hits.
InterProiIPR001304. C-type_lectin.
IPR016186. C-type_lectin-like.
IPR016187. C-type_lectin_fold.
[Graphical view]
PfamiPF00059. Lectin_C. 2 hits.
[Graphical view]
SMARTiSM00034. CLECT. 2 hits.
[Graphical view]
SUPFAMiSSF56436. SSF56436. 2 hits.
PROSITEiPS50041. C_TYPE_LECTIN_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiP91429_CAEEL
AccessioniPrimary (citable) accession number: P91429
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: July 19, 2005
Last modified: September 7, 2016
This is version 106 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.