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Protein
Submitted name:

C. Elegans Y-box

Gene

cey-3

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • DNA binding Source: InterPro
  • ribonucleoprotein complex binding Source: WormBase

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-CEL-72163 mRNA Splicing - Major Pathway
R-CEL-72165 mRNA Splicing - Minor Pathway

Names & Taxonomyi

Protein namesi
Submitted name:
C. Elegans Y-boxImported
Gene namesi
Name:cey-3Imported
ORF Names:CELE_M01E11.5Imported, M01E11.5Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiM01E11.5 ; CE12296 ; WBGene00000474 ; cey-3

Subcellular locationi

PTM / Processingi

Proteomic databases

EPDiP91398
PaxDbiP91398
PeptideAtlasiP91398

Expressioni

Gene expression databases

BgeeiWBGene00000474

Interactioni

Protein-protein interaction databases

STRINGi6239.M01E11.5.2

Structurei

3D structure databases

ProteinModelPortaliP91398
SMRiP91398
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini65 – 134CSPInterPro annotationAdd BLAST70

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili179 – 202Sequence analysisAdd BLAST24

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG3070 Eukaryota
COG1278 LUCA
GeneTreeiENSGT00880000137907
HOGENOMiHOG000016644
InParanoidiP91398
KOiK09276
OrthoDBiEOG091G0W9A

Family and domain databases

CDDicd04458 CSP_CDS, 1 hit
InterProiView protein in InterPro
IPR019844 Cold-shock_CS
IPR011129 CSD
IPR002059 CSP_DNA-bd
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF00313 CSD, 1 hit
PRINTSiPR00050 COLDSHOCK
SMARTiView protein in SMART
SM00357 CSP, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
PROSITEiView protein in PROSITE
PS00352 COLD_SHOCK, 1 hit

Sequencei

Sequence statusi: Complete.

P91398-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDTANTAVE VDEQVIEKKL DDLSIGKKRS PSKDDTSKHR LPAAERIRIW
60 70 80 90 100
EEEQKAKIVL TAGLQGKVKW YSVLRRYGFI SRSDGEKDVF VHQTAISKSD
110 120 130 140 150
TEKFYLRTLA DEEEVLFDLV DGKNGPEAAN VTGPAGVNVS GSKYRHQLLS
160 170 180 190 200
RFRKNRKPKI VVGEDFDSKE TEKLVEAPAV AMEKKKQRKQ RKNKNRKQKD
210 220 230 240 250
QKGAGDAADS SATTESLGTS SETASPDSKS CTKIISEEAG LSKIDRCDSA
260
LDDAGLGAQL IDAQI
Length:265
Mass (Da):29,244
Last modified:May 1, 1997 - v1
Checksum:iCE8DE28CDE4F912E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA Translation: CCD71344.1
PIRiT29322
RefSeqiNP_491631.1, NM_059230.6
UniGeneiCel.18434

Genome annotation databases

EnsemblMetazoaiM01E11.5.1; M01E11.5.1; WBGene00000474
M01E11.5.2; M01E11.5.2; WBGene00000474
GeneIDi172211
KEGGicel:CELE_M01E11.5
UCSCiM01E11.5.1 c. elegans

Similar proteinsi

Entry informationi

Entry nameiP91398_CAEEL
AccessioniPrimary (citable) accession number: P91398
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: May 23, 2018
This is version 131 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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