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Protein
Submitted name:

C. Elegans Y-box

Gene

cey-2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-CEL-72163. mRNA Splicing - Major Pathway.
R-CEL-72165. mRNA Splicing - Minor Pathway.

Names & Taxonomyi

Protein namesi
Submitted name:
C. Elegans Y-boxImported
Gene namesi
Name:cey-2Imported
ORF Names:CELE_F46F11.2Imported, F46F11.2Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiF46F11.2; CE10598; WBGene00000473; cey-2.

Subcellular locationi

GO - Cellular componenti

  • intracellular ribonucleoprotein complex Source: WormBase
Complete GO annotation...

PTM / Processingi

Proteomic databases

EPDiP91306.
PaxDbiP91306.

Expressioni

Gene expression databases

BgeeiWBGene00000473.

Interactioni

Protein-protein interaction databases

DIPiDIP-26178N.
IntActiP91306. 1 interaction.
MINTiMINT-1083994.
STRINGi6239.F46F11.2.2.

Structurei

3D structure databases

ProteinModelPortaliP91306.
SMRiP91306. Positions 59-136.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini67 – 13670CSPInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 CSD (cold-shock) domain.UniRule annotation

Phylogenomic databases

eggNOGiKOG3070. Eukaryota.
COG1278. LUCA.
GeneTreeiENSGT00840000129777.
HOGENOMiHOG000016644.
InParanoidiP91306.
KOiK09276.
OMAiVERIRIW.
OrthoDBiEOG091G0W9A.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR019844. Cold-shock_CS.
IPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00313. CSD. 1 hit.
[Graphical view]
PRINTSiPR00050. COLDSHOCK.
SMARTiSM00357. CSP. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00352. COLD_SHOCK. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P91306-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDTANAAVE IGEEALEQKL EELSVQDKTT PSNSEEKMRK RRLPTAERIR
60 70 80 90 100
LWEEEQKSKT AITTGLQGKV KWYSVLRRYG FISRNDGEKD IFVHQTAIAK
110 120 130 140 150
SATEKFYLRT LGDDEEVLFD LVEGKNGPEA ANVTGPNGDN VIGSRYRHKL
160 170 180 190 200
LSRFRKNRKP RASVDGEESQ STDAKPQEMS ADAEKKKPRK QRKNRNRKSK
210 220 230 240 250
AQQKGAGDAA DSSAVTESSE SASDVASPDS KSCSKIITEE AGLSKVDRCD
260
SALGEAGLGA QPIDAQI
Length:267
Mass (Da):29,405
Last modified:May 1, 1997 - v1
Checksum:iBA3EB7F29BAA0A80
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CCD71325.1.
PIRiT25767.
RefSeqiNP_491645.1. NM_059244.4.
UniGeneiCel.6639.

Genome annotation databases

EnsemblMetazoaiF46F11.2; F46F11.2; WBGene00000473.
GeneIDi172219.
KEGGicel:CELE_F46F11.2.
UCSCiF46F11.2.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CCD71325.1.
PIRiT25767.
RefSeqiNP_491645.1. NM_059244.4.
UniGeneiCel.6639.

3D structure databases

ProteinModelPortaliP91306.
SMRiP91306. Positions 59-136.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-26178N.
IntActiP91306. 1 interaction.
MINTiMINT-1083994.
STRINGi6239.F46F11.2.2.

Proteomic databases

EPDiP91306.
PaxDbiP91306.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF46F11.2; F46F11.2; WBGene00000473.
GeneIDi172219.
KEGGicel:CELE_F46F11.2.
UCSCiF46F11.2.1. c. elegans.

Organism-specific databases

CTDi172219.
WormBaseiF46F11.2; CE10598; WBGene00000473; cey-2.

Phylogenomic databases

eggNOGiKOG3070. Eukaryota.
COG1278. LUCA.
GeneTreeiENSGT00840000129777.
HOGENOMiHOG000016644.
InParanoidiP91306.
KOiK09276.
OMAiVERIRIW.
OrthoDBiEOG091G0W9A.

Enzyme and pathway databases

ReactomeiR-CEL-72163. mRNA Splicing - Major Pathway.
R-CEL-72165. mRNA Splicing - Minor Pathway.

Gene expression databases

BgeeiWBGene00000473.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR019844. Cold-shock_CS.
IPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00313. CSD. 1 hit.
[Graphical view]
PRINTSiPR00050. COLDSHOCK.
SMARTiSM00357. CSP. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00352. COLD_SHOCK. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiP91306_CAEEL
AccessioniPrimary (citable) accession number: P91306
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: September 7, 2016
This is version 129 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.