P91280 (P91280_CAEEL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein F27C1.6 EMBL CCD66286.1

Gene names

ORF Names:

F27C1.6 EMBL CCD66286.1 WormBase F27C1.6

Organism

Caenorhabditis elegans

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	647 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	growth Inferred from mutant phenotype. Source: WormBase hermaphrodite genitalia development Inferred from mutant phenotype. Source: WormBase lipid storage Inferred from mutant phenotype. Source: WormBase nematode larval development Inferred from mutant phenotype. Source: WormBase positive regulation of growth rate Inferred from mutant phenotype. Source: WormBase rRNA processing Inferred from electronic annotation. Source: InterPro receptor-mediated endocytosis Inferred from mutant phenotype. Source: WormBase
Cellular component	small-subunit processome Inferred from electronic annotation. Source: InterPro
Molecular function	protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
rnf-1	O01482	3	EBI-320581,EBI-315611

Sequences

	Sequence		Length	Mass (Da)
	P91280 [UniParc]. Last modified May 1, 1997. Version 1. Checksum: 28578E760DC48482	FASTA	647	73,457
	10 20 30 40 50 60 MSDDSDLDDV AHQKLLQSIH TPGTVKKNRL KKASKTKTDA TSLLSHLTVS RPSTNKAKQS 70 80 90 100 110 120 LGIGGLESTE KTGKKRKSEA TADETTTKKK LKSKTLIPLK DVEARKEIEG KIAFTDLKKE 130 140 150 160 170 180 VTQNWTELVQ SNRVSDQLIF PLTKPDGIMW GDEKTEPVLT EKEMELMKAT DIKMAKDRLS 190 200 210 220 230 240 QMQRMRAIVG IQEAKNRYMK KIKSKGYHRI LKREKRKQLL KEFDDLVARD PSAAHEKLAE 250 260 270 280 290 300 MDLQRIMERG SLKHRGQNQK FKQMLEKHAS RNPEVKKLLD EHLRMGRELK AKVATTAEDS 310 320 330 340 350 360 DGEAPTSTED PQNKKKSIHE LIKDAAQEAE KESRKQVGTA LVDTFLEDSD AQKVTLAQMR 370 380 390 400 410 420 AKKRQEAAIT RSISANTGAS RENPLFDVDD TWQEKEDAKK AKQKKKKLLK AKESARKGTI 430 440 450 460 470 480 GKVSYVDKNY DPKMEAKRAE TFDEKVEKAV DSAGVHAAEK RQKEIEIDPS KFLELNTNDL 490 500 510 520 530 540 TQVSSDFVEK MDQFDEEAAQ VINEAFKDDD VIGDFEDMKE GVKEKEKVKD VDLNLAGWGS 550 560 570 580 590 600 WVGPGMTEKK RRQNFVIKAK EKRRRDGERN GVIIAENMTA KDGIGKIQPR SLPFPYSRVE 610 620 630 640 DYEAVLKQPL GLEWNMEKMR DELCKPAVVV EAGRAIRPIN KKHLLGE

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FO080736 Genomic DNA. Translation: CCD66286.1.
PIR	T29523.
RefSeq	NP_491590.1. NM_059189.3.
UniGene	Cel.17544.
3D structure databases
ProteinModelPortal	P91280.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP-27088N.
IntAct	P91280. 10 interactions.
MINT	MINT-1045839.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	F27C1.6.1; F27C1.6.1; F27C1.6. F27C1.6.2; F27C1.6.2; F27C1.6.
GeneID	172192.
KEGG	cel:F27C1.6.
UCSC	F27C1.6.1. c. elegans.
Organism-specific databases
CTD	172192.
WormBase	F27C1.6; CE09718; WBGene00017855.
Phylogenomic databases
eggNOG	meNOG09770.
GeneTree	EMGT00050000000970.
HOGENOM	HBG377695.
InParanoid	P91280.
OMA	AIRPINK.
PhylomeDB	P91280.
Gene expression databases
ArrayExpress	P91280.
Family and domain databases
InterPro	IPR006709. SSU_processome_Utp14. [Graphical view]
KO	K14567.
PANTHER	PTHR14150. Utp14. 1 hit.
Pfam	PF04615. Utp14. 3 hits. [Graphical view]
ProtoNet	Search...
Other
NextBio	874419.

Entry information

Entry name

P91280_CAEEL

Accession

Primary (citable) accession number: P91280

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 1997
Last sequence update:	May 1, 1997
Last modified:	January 25, 2012
This is version 69 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)