Putative uncharacterized protein - Caenorhabditis elegans

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Unreviewed, UniProtKB/TrEMBL P91280 (P91280_CAEEL)

Last modified May 5, 2009. Version 47. History...

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Names and origin · Protein attributes · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL AAB37651.1

Gene names

ORF Names:

F27C1.6 EMBL AAB37651.1

Organism

Caenorhabditis elegans [Complete proteome]

Taxonomic identifier

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	647 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	hermaphrodite genitalia development Inferred from mutant phenotype. Source: WormBase nematode larval development Inferred from mutant phenotype. Source: WormBase positive regulation of growth rate Inferred from mutant phenotype. Source: WormBase rRNA processing Inferred from electronic annotation. Source: InterPro
Cellular component	small-subunit processome Inferred from electronic annotation. Source: InterPro
Molecular function	protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
	O16370	1	EBI-320581,EBI-315998
	O62160	1	EBI-320581,EBI-320592
	P42171	1	EBI-320581,EBI-314321
	Q19872	1	EBI-320581,EBI-316637
	Q22847	1	EBI-320581,EBI-316760
	Q93228	1	EBI-320581,EBI-315621
bed-2	Q9XWZ9	1	EBI-320581,EBI-320596
math-14	O16552	1	EBI-320581,EBI-320586
rnf-1	O01482	1	EBI-320581,EBI-315611
tac-1	Q9XWJ0	1	EBI-320581,EBI-320612

Sequences

Sequence

Length

Mass (Da)

Tools

P91280-1 [UniParc].

Last modified May 1, 1997. Version 1.
Checksum: 28578E760DC48482
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647

73,457

        10         20         30         40         50         60 
MSDDSDLDDV AHQKLLQSIH TPGTVKKNRL KKASKTKTDA TSLLSHLTVS RPSTNKAKQS 

        70         80         90        100        110        120 
LGIGGLESTE KTGKKRKSEA TADETTTKKK LKSKTLIPLK DVEARKEIEG KIAFTDLKKE 

       130        140        150        160        170        180 
VTQNWTELVQ SNRVSDQLIF PLTKPDGIMW GDEKTEPVLT EKEMELMKAT DIKMAKDRLS 

       190        200        210        220        230        240 
QMQRMRAIVG IQEAKNRYMK KIKSKGYHRI LKREKRKQLL KEFDDLVARD PSAAHEKLAE 

       250        260        270        280        290        300 
MDLQRIMERG SLKHRGQNQK FKQMLEKHAS RNPEVKKLLD EHLRMGRELK AKVATTAEDS 

       310        320        330        340        350        360 
DGEAPTSTED PQNKKKSIHE LIKDAAQEAE KESRKQVGTA LVDTFLEDSD AQKVTLAQMR 

       370        380        390        400        410        420 
AKKRQEAAIT RSISANTGAS RENPLFDVDD TWQEKEDAKK AKQKKKKLLK AKESARKGTI 

       430        440        450        460        470        480 
GKVSYVDKNY DPKMEAKRAE TFDEKVEKAV DSAGVHAAEK RQKEIEIDPS KFLELNTNDL 

       490        500        510        520        530        540 
TQVSSDFVEK MDQFDEEAAQ VINEAFKDDD VIGDFEDMKE GVKEKEKVKD VDLNLAGWGS 

       550        560        570        580        590        600 
WVGPGMTEKK RRQNFVIKAK EKRRRDGERN GVIIAENMTA KDGIGKIQPR SLPFPYSRVE 

       610        620        630        640 
DYEAVLKQPL GLEWNMEKMR DELCKPAVVV EAGRAIRPIN KKHLLGE

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.

Cross-references

Sequence databases
	U80441 Genomic DNA. Translation: AAB37651.1.
PIR	T29523.
RefSeq	NP_491590.1.
UniGene	Cel.17544
3D structure databases
ModBase	Search...
Protein-protein interaction databases
DIP	DIP:27088N.
IntAct	P91280. 11 interactions.
Genome annotation databases
Ensembl	F27C1.6. Caenorhabditis elegans. [Contig view]
GeneID	172192.
KEGG	cel:F27C1.6.
Organism-specific databases
WormBase	WBGene00017855. F27C1.6.
WormPep	F27C1.6. CE09718. [WorfDB]
Phylogenomic databases
OMA	P91280. NEVQMNA.
Gene expression databases
ArrayExpress	P91280.
Family and domain databases
InterPro	IPR006709. SSU_processome_Utp14. [Graphical view]
PANTHER	PTHR14150. Utp14. 1 hit.
Pfam	PF04615. Utp14. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	874419.

Entry information

Entry name

P91280_CAEEL

Accession

Primary (citable) accession number: P91280

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 1997
Last sequence update:	May 1, 1997
Last modified:	May 5, 2009
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information