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Protein
Submitted name:

Uncharacterized protein

Gene

C10H11.8

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • mesendoderm development Source: WormBase
  • TOR signaling Source: WormBase
Complete GO annotation...

Enzyme and pathway databases

SignaLinkiP91040.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:C10H11.8Imported, CELE_C10H11.8Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiC10H11.8a; CE08097; WBGene00015697.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

EPDiP91040.
PaxDbiP91040.

Expressioni

Gene expression databases

ExpressionAtlasiP91040. baseline.

Interactioni

Protein-protein interaction databases

STRINGi6239.C10H11.8a.

Structurei

3D structure databases

ProteinModelPortaliP91040.
SMRiP91040. Positions 39-376.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini45 – 362318WD_REPEATS_REGIONInterPro annotationAdd
BLAST

Keywords - Domaini

RepeatUniRule annotationSAAS annotation, WD repeatSAAS annotation

Phylogenomic databases

eggNOGiKOG0315. Eukaryota.
ENOG410XPVD. LUCA.
GeneTreeiENSGT00390000014795.
HOGENOMiHOG000017260.
InParanoidiP91040.
OMAiCRIWEMR.
OrthoDBiEOG7BCNBX.
PhylomeDBiP91040.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR011047. Quinoprotein_ADH-like_supfam.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 2 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 6 hits.
[Graphical view]
SUPFAMiSSF50998. SSF50998. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 2 hits.
PS50082. WD_REPEATS_2. 3 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P91040-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRFKKLKNRQ IFIFFKKYFM TPEKSFETEK HFQNTNQVPT EAPPSFDPSP
60 70 80 90 100
HALLVSASYD LTIRLWQLST GKCIGTIPHN EGQVNALSLT STGRDLAVGA
110 120 130 140 150
WQKVRIYDVS SGKDPKATIE LPKNVTVVGF EAAGRWMYTG GDDGVCRIWE
160 170 180 190 200
MRNNQLVANR LLSFPGSTVT SIVPNTHQTH LFVSTNSAHV WVWDVVNHIF
210 220 230 240 250
MRLPMPDDLK MQEFVQKLAV HPSGKKLTGI TNKGRLLCWD LMTREVVESS
260 270 280 290 300
AFDMFKSPIV PIEQDTGTYG CLRDEDKHYK MREGHGLSCR YSPDGKYIVA
310 320 330 340 350
SGSEKEVYVF NSETMEIKGS LQTECGWNWD AIFSSEGRYI FTGGNDNQVK
360 370 380
IWDVENNKKV AQWDGHIKPL TAMCMNGPTP PP
Length:382
Mass (Da):43,209
Last modified:May 1, 1997 - v1
Checksum:i0E8729926AA8BF84
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CCD64220.1.
PIRiT25538.
RefSeqiNP_001249709.1. NM_001262780.1.
UniGeneiCel.25789.

Genome annotation databases

EnsemblMetazoaiC10H11.8a; C10H11.8a; WBGene00015697.
GeneIDi182509.
UCSCiC10H11.8. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CCD64220.1.
PIRiT25538.
RefSeqiNP_001249709.1. NM_001262780.1.
UniGeneiCel.25789.

3D structure databases

ProteinModelPortaliP91040.
SMRiP91040. Positions 39-376.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.C10H11.8a.

Proteomic databases

EPDiP91040.
PaxDbiP91040.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC10H11.8a; C10H11.8a; WBGene00015697.
GeneIDi182509.
UCSCiC10H11.8. c. elegans.

Organism-specific databases

CTDi182509.
WormBaseiC10H11.8a; CE08097; WBGene00015697.

Phylogenomic databases

eggNOGiKOG0315. Eukaryota.
ENOG410XPVD. LUCA.
GeneTreeiENSGT00390000014795.
HOGENOMiHOG000017260.
InParanoidiP91040.
OMAiCRIWEMR.
OrthoDBiEOG7BCNBX.
PhylomeDBiP91040.

Enzyme and pathway databases

SignaLinkiP91040.

Gene expression databases

ExpressionAtlasiP91040. baseline.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR011047. Quinoprotein_ADH-like_supfam.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 2 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 6 hits.
[Graphical view]
SUPFAMiSSF50998. SSF50998. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 2 hits.
PS50082. WD_REPEATS_2. 3 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiP91040_CAEEL
AccessioniPrimary (citable) accession number: P91040
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: June 8, 2016
This is version 126 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.