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Protein
Submitted name:

Proteasome Beta Subunit

Gene

pbs-7

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-CEL-1236978. Cross-presentation of soluble exogenous antigens (endosomes).
R-CEL-174113. SCF-beta-TrCP mediated degradation of Emi1.
R-CEL-195253. Degradation of beta-catenin by the destruction complex.
R-CEL-4608870. Asymmetric localization of PCP proteins.
R-CEL-4641258. Degradation of DVL.
R-CEL-5632684. Hedgehog 'on' state.
R-CEL-5668541. TNFR2 non-canonical NF-kB pathway.
R-CEL-69017. CDK-mediated phosphorylation and removal of Cdc6.
R-CEL-69229. Ubiquitin-dependent degradation of Cyclin D1.
R-CEL-69601. Ubiquitin Mediated Degradation of Phosphorylated Cdc25A.
R-CEL-983168. Antigen processing: Ubiquitination & Proteasome degradation.

Protein family/group databases

MEROPSiT01.A08.

Names & Taxonomyi

Protein namesi
Submitted name:
Proteasome Beta SubunitImported
Gene namesi
Name:pbs-7Imported
ORF Names:CELE_F39H11.5Imported, F39H11.5Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiF39H11.5; CE20761; WBGene00003953; pbs-7.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

ProteasomeImported

PTM / Processingi

Proteomic databases

EPDiP90868.
PaxDbiP90868.
PRIDEiP90868.

Interactioni

Protein-protein interaction databases

DIPiDIP-26967N.
IntActiP90868. 8 interactions.
MINTiMINT-211920.
STRINGi6239.F39H11.5.

Structurei

3D structure databases

ProteinModelPortaliP90868.
SMRiP90868. Positions 10-229.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG0185. Eukaryota.
ENOG410YAMA. LUCA.
GeneTreeiENSGT00390000000698.
HOGENOMiHOG000181719.
InParanoidiP90868.
KOiK02736.
OMAiRIMRVND.
OrthoDBiEOG74FF1D.
PhylomeDBiP90868.

Family and domain databases

Gene3Di3.60.20.10. 1 hit.
InterProiIPR029055. Ntn_hydrolases_N.
IPR016295. Proteasome_endopept_cplx_B.
IPR001353. Proteasome_sua/b.
[Graphical view]
PfamiPF00227. Proteasome. 1 hit.
[Graphical view]
PIRSFiPIRSF001213. Psome_endopept_beta. 1 hit.
SUPFAMiSSF56235. SSF56235. 1 hit.

Sequencei

Sequence statusi: Complete.

P90868-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNAHDEVQRT LNPTCTGTSV IALQYKTGVV VLTDRVVSYG KMARYKNVSR
60 70 80 90 100
QYKVNDNVLI AFGGDHADFH WLQNVIERQV LLWKRFDQDI GPKALHGYLT
110 120 130 140 150
SLLYAKRCKM NPVWNTLVVA GVEEEEKNNK ETSTPFIGVI TQKGCAYQVK
160 170 180 190 200
HIATGLGAFL LNQAVEDEWR KKGEDLSREE AEAVLRKSLE LTLYHDCVAD
210 220 230
NEFEIGRVDA TEGVVLGKEE KIIGDWSIAE TNCQYE
Length:236
Mass (Da):26,682
Last modified:May 1, 1999 - v2
Checksum:iCFA2C116C799DABB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CAB03081.1.
PIRiT22003.
RefSeqiNP_492354.1. NM_059953.4.
UniGeneiCel.18394.

Genome annotation databases

EnsemblMetazoaiF39H11.5; F39H11.5; WBGene00003953.
GeneIDi172674.
KEGGicel:CELE_F39H11.5.
UCSCiF39H11.5.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CAB03081.1.
PIRiT22003.
RefSeqiNP_492354.1. NM_059953.4.
UniGeneiCel.18394.

3D structure databases

ProteinModelPortaliP90868.
SMRiP90868. Positions 10-229.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-26967N.
IntActiP90868. 8 interactions.
MINTiMINT-211920.
STRINGi6239.F39H11.5.

Protein family/group databases

MEROPSiT01.A08.

Proteomic databases

EPDiP90868.
PaxDbiP90868.
PRIDEiP90868.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF39H11.5; F39H11.5; WBGene00003953.
GeneIDi172674.
KEGGicel:CELE_F39H11.5.
UCSCiF39H11.5.1. c. elegans.

Organism-specific databases

CTDi172674.
WormBaseiF39H11.5; CE20761; WBGene00003953; pbs-7.

Phylogenomic databases

eggNOGiKOG0185. Eukaryota.
ENOG410YAMA. LUCA.
GeneTreeiENSGT00390000000698.
HOGENOMiHOG000181719.
InParanoidiP90868.
KOiK02736.
OMAiRIMRVND.
OrthoDBiEOG74FF1D.
PhylomeDBiP90868.

Enzyme and pathway databases

ReactomeiR-CEL-1236978. Cross-presentation of soluble exogenous antigens (endosomes).
R-CEL-174113. SCF-beta-TrCP mediated degradation of Emi1.
R-CEL-195253. Degradation of beta-catenin by the destruction complex.
R-CEL-4608870. Asymmetric localization of PCP proteins.
R-CEL-4641258. Degradation of DVL.
R-CEL-5632684. Hedgehog 'on' state.
R-CEL-5668541. TNFR2 non-canonical NF-kB pathway.
R-CEL-69017. CDK-mediated phosphorylation and removal of Cdc6.
R-CEL-69229. Ubiquitin-dependent degradation of Cyclin D1.
R-CEL-69601. Ubiquitin Mediated Degradation of Phosphorylated Cdc25A.
R-CEL-983168. Antigen processing: Ubiquitination & Proteasome degradation.

Family and domain databases

Gene3Di3.60.20.10. 1 hit.
InterProiIPR029055. Ntn_hydrolases_N.
IPR016295. Proteasome_endopept_cplx_B.
IPR001353. Proteasome_sua/b.
[Graphical view]
PfamiPF00227. Proteasome. 1 hit.
[Graphical view]
PIRSFiPIRSF001213. Psome_endopept_beta. 1 hit.
SUPFAMiSSF56235. SSF56235. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiP90868_CAEEL
AccessioniPrimary (citable) accession number: P90868
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1999
Last modified: June 8, 2016
This is version 124 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.