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Protein
Submitted name:

Uncharacterized protein

Gene

C55A6.7

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • defense response to Gram-negative bacterium Source: WormBase
  • innate immune response Source: WormBase
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:C55A6.7Imported, CELE_C55A6.7Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiC55A6.7; CE09004; WBGene00008336.

PTM / Processingi

Proteomic databases

EPDiP90781.
PaxDbiP90781.
PRIDEiP90781.

Interactioni

Protein-protein interaction databases

DIPiDIP-25183N.
MINTiMINT-1103849.
STRINGi6239.C55A6.7.

Structurei

3D structure databases

ProteinModelPortaliP90781.
SMRiP90781. Positions 2-236.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the short-chain dehydrogenases/reductases (SDR) family.UniRule annotation

Phylogenomic databases

eggNOGiKOG1611. Eukaryota.
ENOG4111VKY. LUCA.
GeneTreeiENSGT00510000048108.
InParanoidiP90781.
OMAiEYKAMAY.
OrthoDBiEOG7WMCKG.
PhylomeDBiP90781.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 2 hits.
PfamiPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
SUPFAMiSSF51735. SSF51735. 1 hit.

Sequencei

Sequence statusi: Complete.

P90781-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSPKSVVVTG SNRGLGFGLV QQFLKDPNVQ HVIATARDVD KATALKGICD
60 70 80 90 100
PRLHILQLSL GSDESIANFA EKVSEIVGES GLTLLINNAA VMLPYVTKQK
110 120 130 140 150
PDRKVVLDLF ESNTIGPMML TQSLVPLIIK ASKRQEGDTL SVSRGAIINI
160 170 180 190 200
ASEFLGSISE NTSGSGEYKA MAYRMTKCAV NQFTKTLSID LKDDHILTAG
210 220 230 240 250
ICPGMVQTDM SKGKGQLTIE ESSSQILAAF NKLGATHNGG YFRRDLSIIP

Y
Length:251
Mass (Da):27,034
Last modified:May 1, 1997 - v1
Checksum:iFE1207B860690168
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB02867.1.
PIRiT20259.
RefSeqiNP_505924.1. NM_073523.5.
UniGeneiCel.4351.

Genome annotation databases

EnsemblMetazoaiC55A6.7; C55A6.7; WBGene00008336.
GeneIDi183836.
KEGGicel:CELE_C55A6.7.
UCSCiC55A6.7. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB02867.1.
PIRiT20259.
RefSeqiNP_505924.1. NM_073523.5.
UniGeneiCel.4351.

3D structure databases

ProteinModelPortaliP90781.
SMRiP90781. Positions 2-236.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-25183N.
MINTiMINT-1103849.
STRINGi6239.C55A6.7.

Proteomic databases

EPDiP90781.
PaxDbiP90781.
PRIDEiP90781.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC55A6.7; C55A6.7; WBGene00008336.
GeneIDi183836.
KEGGicel:CELE_C55A6.7.
UCSCiC55A6.7. c. elegans.

Organism-specific databases

CTDi183836.
WormBaseiC55A6.7; CE09004; WBGene00008336.

Phylogenomic databases

eggNOGiKOG1611. Eukaryota.
ENOG4111VKY. LUCA.
GeneTreeiENSGT00510000048108.
InParanoidiP90781.
OMAiEYKAMAY.
OrthoDBiEOG7WMCKG.
PhylomeDBiP90781.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 2 hits.
PfamiPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSiPR00081. GDHRDH.
PR00080. SDRFAMILY.
SUPFAMiSSF51735. SSF51735. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiP90781_CAEEL
AccessioniPrimary (citable) accession number: P90781
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: July 6, 2016
This is version 118 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.