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Protein
Submitted name:

Uncharacterized protein

Gene

C55A6.4

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:C55A6.4Imported, CELE_C55A6.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiC55A6.4; CE09001; WBGene00008333.

PTM / Processingi

Proteomic databases

EPDiP90779.
PaxDbiP90779.
PRIDEiP90779.

Interactioni

Protein-protein interaction databases

STRINGi6239.C55A6.4.

Structurei

3D structure databases

ProteinModelPortaliP90779.
SMRiP90779. Positions 1-250.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG1611. Eukaryota.
ENOG4111VKY. LUCA.
GeneTreeiENSGT00510000048108.
InParanoidiP90779.
OMAiASEFELK.
OrthoDBiEOG7WMCKG.
PhylomeDBiP90779.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 2 hits.
PfamiPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSiPR00081. GDHRDH.
SUPFAMiSSF51735. SSF51735. 1 hit.

Sequencei

Sequence statusi: Complete.

P90779-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSPKSVVITG ANRGIGLGLV QEFVKDKNIR HIIATARDVE KATDLKAISD
60 70 80 90 100
PRVTALQLEV TCDKSMDTFV SKVEEIVGSD GLNLLVNNAG NAVDYPCKAK
110 120 130 140 150
PNRALFAEQL NVNTTSVVIL TQKLMPLLIK ASSKVSGDQL SASRAAVVTI
160 170 180 190 200
SSGLASMTDF ATGGHAPNAF AYRISKAAIN MFGRALANDM KDDHILVASI
210 220 230 240 250
GPGWVKTDMG GEKALLTVEQ STAELVASFN KLNNSHNGGF FQKDLTPYPF
Length:250
Mass (Da):26,625
Last modified:May 1, 1997 - v1
Checksum:i24E4AF36E9A21CB3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB02864.1.
PIRiT20256.
RefSeqiNP_505922.1. NM_073521.5.
UniGeneiCel.34499.

Genome annotation databases

EnsemblMetazoaiC55A6.4; C55A6.4; WBGene00008333.
GeneIDi183833.
KEGGicel:CELE_C55A6.4.
UCSCiC55A6.4. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB02864.1.
PIRiT20256.
RefSeqiNP_505922.1. NM_073521.5.
UniGeneiCel.34499.

3D structure databases

ProteinModelPortaliP90779.
SMRiP90779. Positions 1-250.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.C55A6.4.

Proteomic databases

EPDiP90779.
PaxDbiP90779.
PRIDEiP90779.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiC55A6.4; C55A6.4; WBGene00008333.
GeneIDi183833.
KEGGicel:CELE_C55A6.4.
UCSCiC55A6.4. c. elegans.

Organism-specific databases

CTDi183833.
WormBaseiC55A6.4; CE09001; WBGene00008333.

Phylogenomic databases

eggNOGiKOG1611. Eukaryota.
ENOG4111VKY. LUCA.
GeneTreeiENSGT00510000048108.
InParanoidiP90779.
OMAiASEFELK.
OrthoDBiEOG7WMCKG.
PhylomeDBiP90779.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR016040. NAD(P)-bd_dom.
IPR002347. SDR_fam.
[Graphical view]
PANTHERiPTHR24322. PTHR24322. 2 hits.
PfamiPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSiPR00081. GDHRDH.
SUPFAMiSSF51735. SSF51735. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiP90779_CAEEL
AccessioniPrimary (citable) accession number: P90779
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: July 6, 2016
This is version 113 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.