P90629 (P90629_9TRYP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
GBP21 EMBL AAC47460.1

Gene names

Name:

gBP21 EMBL AAC47460.1

Organism

Trypanosoma brucei EMBL AAC47460.1

Taxonomic identifier

5691 [NCBI]

Taxonomic lineage

Eukaryota › Euglenozoa › Kinetoplastida › Trypanosomatidae › Trypanosoma

Protein attributes

Sequence length	206 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 2GJE PDB 2GID PDB 2GIA
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	20 – 206	187	gBP21 EMBL AAC47460.1		PRO_5000145046

Sequences

	Sequence		Length	Mass (Da)
	P90629 [UniParc]. Last modified May 1, 1997. Version 1. Checksum: BE2EB3B9AFC9228F	FASTA	206	23,253
	10 20 30 40 50 60 MIRLACLRGP AMRSAWSRGA STFSGVQSLP KFEIHDVRDD PALGTMTRVA VDGKLLLISQ 70 80 90 100 110 120 YPQLGPRKVD PNDLSPQFDA DRRISVRLRH VDLAYLVGVC KERVPRHRME TKAYTLDFEK 130 140 150 160 170 180 SAQGYHLHGK VHRVASQRME DWSVKFDNHF AVTLEHFLES ALDESFGFRQ HYATRAAEGG 190 200 EKIAATSSAE GGARRKRSVS DTSRYH

References

[1]	"Trypanosoma brucei gBP21. An arginine-rich mitochondrial protein that binds to guide RNA with high affinity." Koller J., Muller U.F., Schmid B., Missel A., Kruft V., Stuart K., Goringer H.U. J. Biol. Chem. 272:3749-3757(1997) [PubMed: 9013632] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: IsTaR 1.7 EMBL AAC47460.1.
[2]	Koeller J., Goeringer H.U. Submitted (JUN-1996) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: IsTaR 1.7 EMBL AAC47460.1.
[3]	"Crystal structures of T. brucei MRP1/MRP2 guide-RNA binding complex reveal RNA matchmaking mechanism." Schumacher M.A., Karamooz E., Zikova A., Trantirek L., Lukes J. Cell 126:701-711(2006) [PubMed: 16923390] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.89 ANGSTROMS) OF 20-206.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

U61382 Genomic DNA. Translation: AAC47460.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2GIA	X-ray	1.89	B/D	20-206	[»]
2GID	X-ray	3.35	B/D/J/K	20-206	[»]
2GJE	X-ray	3.37	D	20-206	[»]

ProteinModelPortal

P90629.

SMR

P90629. Positions 27-173.

ModBase

Search...

Protein-protein interaction databases

IntAct

P90629. 1 interaction.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblProtists

EAN79148; EAN79148; Tb11.55.0009.

KEGG

tbr:Tb11.55.0009.

Organism-specific databases

EuPathDB

EupathDB:Tb11.55.0009.

Phylogenomic databases

eggNOG

euNOG16984.

ProtClustDB

CLSZ2439170.

Family and domain databases

InterPro

IPR018539. RNA-bd_mt.
IPR009044. ssDNA-bd_transcriptional_reg.
[Graphical view]

Pfam

PF09387. MRP. 1 hit.
[Graphical view]

SUPFAM

SSF54447. ssDNA_bind_regul. 1 hit.

ProtoNet

Search...

Entry information

Entry name

P90629_9TRYP

Accession

Primary (citable) accession number: P90629

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 1997
Last sequence update:	May 1, 1997
Last modified:	November 16, 2011
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)