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Protein
Submitted name:

Nucleic acid binding protein

Gene
N/A
Organism
Trypanosoma equiperdum
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Nucleic acid binding proteinImported
OrganismiTrypanosoma equiperdumImported
Taxonomic identifieri5694 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma

Structurei

3D structure databases

ProteinModelPortaliP90606.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini19 – 3416CCHC-typeInterPro annotationAdd
BLAST
Domaini45 – 6016CCHC-typeInterPro annotationAdd
BLAST
Domaini73 – 8816CCHC-typeInterPro annotationAdd
BLAST
Domaini105 – 12016CCHC-typeInterPro annotationAdd
BLAST
Domaini137 – 15216CCHC-typeInterPro annotationAdd
BLAST
Domaini164 – 17916CCHC-typeInterPro annotationAdd
BLAST
Domaini197 – 21115CCHC-typeInterPro annotationAdd
BLAST

Family and domain databases

Gene3Di4.10.60.10. 6 hits.
InterProiIPR001878. Znf_CCHC.
[Graphical view]
PfamiPF00098. zf-CCHC. 7 hits.
[Graphical view]
SMARTiSM00343. ZnF_C2HC. 7 hits.
[Graphical view]
SUPFAMiSSF57756. SSF57756. 5 hits.
PROSITEiPS50158. ZF_CCHC. 7 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P90606-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADEASTAKR HRAEGGNNCH RCGQPGHFAR ECPNVPPGAM GDRACYTCGQ
60 70 80 90 100
PDHLSRDCPS NRGTAPMGGG RACYNCGQPG HFSRECPNMR GGPMGGAPMG
110 120 130 140 150
GGRACYNCVQ PGHFSRECPN MRGGPMGGAP MGGGRACYHC GQPGHFSREC
160 170 180 190 200
PNMRGANMGG GRECYQCRQE GHIASECPNA PDDAAAGGTA AGGGRACYKC
210 220 230 240 250
GQPGHLSRAC PVTIRTDSKG GVPMYRPSSQ CEHATPTYTF AIKRCHLTTL
260 270
LRFDCTYIFV ESVGSVIKKQ
Length:270
Mass (Da):28,453
Last modified:May 1, 1997 - v1
Checksum:i50D2C559FD9F7234
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U87108 Genomic DNA. Translation: AAB47542.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U87108 Genomic DNA. Translation: AAB47542.1.

3D structure databases

ProteinModelPortaliP90606.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di4.10.60.10. 6 hits.
InterProiIPR001878. Znf_CCHC.
[Graphical view]
PfamiPF00098. zf-CCHC. 7 hits.
[Graphical view]
SMARTiSM00343. ZnF_C2HC. 7 hits.
[Graphical view]
SUPFAMiSSF57756. SSF57756. 5 hits.
PROSITEiPS50158. ZF_CCHC. 7 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiP90606_TRYEQ
AccessioniPrimary (citable) accession number: P90606
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: September 7, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.