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Protein

Gag polyprotein

Gene

gag

Organism
Feline immunodeficiency virus
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processHost-virus interaction, Viral budding, Viral budding via the host ESCRT complexesSAAS annotation, Viral release from host cell
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Gag polyproteinSAAS annotation
Gene namesi
Name:gagImported
OrganismiFeline immunodeficiency virusImported
Taxonomic identifieri11673 [NCBI]
Taxonomic lineageiVirusesRetro-transcribing virusesRetroviridaeOrthoretrovirinaeLentivirusFeline lentivirus group

Subcellular locationi

  • Virion SAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

Capsid proteinSAAS annotation, Virion

Structurei

3D structure databases

ProteinModelPortaliP89686
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini410 – 425CCHC-typeInterPro annotationAdd BLAST16
Domaini428 – 443CCHC-typeInterPro annotationAdd BLAST16

Keywords - Domaini

RepeatSAAS annotation, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Family and domain databases

Gene3Di1.10.1200.30, 1 hit
1.10.150.90, 1 hit
1.10.375.10, 1 hit
InterProiView protein in InterPro
IPR000721 Gag_p24
IPR012344 Matrix_HIV/RSV_N
IPR008916 Retrov_capsid_C
IPR008919 Retrov_capsid_N
IPR001878 Znf_CCHC
IPR036875 Znf_CCHC_sf
PfamiView protein in Pfam
PF00607 Gag_p24, 1 hit
PF00098 zf-CCHC, 2 hits
SMARTiView protein in SMART
SM00343 ZnF_C2HC, 2 hits
SUPFAMiSSF47943 SSF47943, 1 hit
SSF57756 SSF57756, 1 hit
PROSITEiView protein in PROSITE
PS50158 ZF_CCHC, 2 hits

Sequencei

Sequence statusi: Complete.

P89686-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGNEQGKEVK AAVKRCKEVA VGPGSKSKKY GEGNIRWAIR MANVTTGRDP
60 70 80 90 100
GKLPENIAQV RNLVCDLMEI RDKYGSNKEI EAAIKTLKVL GVVGILFMKA
110 120 130 140 150
SNTDSAVNLW EIMGLNSRPS EKGPGGEEEA MPSAFQAKEQ KGVGLRDPQD
160 170 180 190 200
IAKEYPIQVV NGQAQYVPLN PRMVAIFMEK ARDGLGTEEV LLWFTAFSAD
210 220 230 240 250
LTPTDMATIL MSAPGCAADK EIIDTKLKEL TTEYERTHPS DAPRPLPYFT
260 270 280 290 300
AREIMGLDLT QDQQAQPQFH AGRVQARAWY IEALQYLQKI KSRSPRAVQM
310 320 330 340 350
KQGPKEDYAS FIDRLYAQID QEQNSPEVKI YLKQSLSLAN ANPECKKAMS
360 370 380 390 400
HLKPESTLEE KLRACQEVGS TSYKMNMLAQ ALQQQSQVCQ VQQGRGKPQG
410 420 430 440 450
NNRRPGQSLK CFNCGKPGHL ARNCRAPRKC NKCGKAGHIA TDCWDMQGKQ
460 470 480 490
QGNWQKGRAA APIKQVQQFQ TAVSTTQNQQ QCQLIQPSAP PMESLMDI
Length:498
Mass (Da):55,285
Last modified:May 1, 1997 - v1
Checksum:iE3B971DF4E115ADC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U56928 Genomic DNA Translation: AAB49922.1
AY713445 Genomic RNA Translation: AAU20797.1

Similar proteinsi

Entry informationi

Entry nameiP89686_9RETR
AccessioniPrimary (citable) accession number: P89686
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: April 25, 2018
This is version 99 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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