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Protein

Protein VP2

Gene

ORF3

Organism
Vesicular exanthema of swine virus serotype A48 (isolate Swine/United States/A48/1948) (VESV)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Minor structural protein present in one or two copies per virion. Does not seem to play a role in capsid assembly, but is essential for production of infectious virus (By similarity).By similarity

Names & Taxonomyi

Protein namesi
Recommended name:
Protein VP2
Alternative name(s):
Minor capsid protein
Gene namesi
ORF Names:ORF3
OrganismiVesicular exanthema of swine virus serotype A48 (isolate Swine/United States/A48/1948) (VESV)
Taxonomic identifieri85617 [NCBI]
Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stageCaliciviridaeVesivirus
Virus hostiSus scrofa (Pig) [TaxID: 9823]
ProteomesiUP000007661: Genome

Subcellular locationi

Virion. Host cytoplasm By similarity

GO - Cellular componenti

  1. host cell cytoplasm Source: UniProtKB-SubCell
  2. virion Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Host cytoplasm, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 110110Protein VP2PRO_0000402466Add
BLAST

Interactioni

Subunit structurei

May interact with capsid protein.By similarity

Family & Domainsi

Sequence similaritiesi

Belongs to the vesivirus VP2 protein family.Curated

Family and domain databases

InterProiIPR007996. Vesivirus_VP2.
[Graphical view]
PfamiPF05332. DUF743. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P89682-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNYANFGLDF LNSVANAAVE GKKLDLASRG LQLRSRALDT ERDFNYAKLA
60 70 80 90 100
FERHKFDTNN DLRIYGDAMR IQALRAAGLR INPYSNGRQI YQDEADLANL
110
HSYYSFYKTD
Length:110
Mass (Da):12,649
Last modified:May 1, 1997 - v1
Checksum:iFF9D07BECDAFF6E8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U76874 Genomic RNA. Translation: AAC13890.1.
RefSeqiNP_066257.1. NC_002551.1.

Genome annotation databases

GeneIDi911833.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U76874 Genomic RNA. Translation: AAC13890.1.
RefSeqiNP_066257.1. NC_002551.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi911833.

Family and domain databases

InterProiIPR007996. Vesivirus_VP2.
[Graphical view]
PfamiPF05332. DUF743. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The capsid protein of vesicular exanthema of swine virus serotype A48: relationship to the capsid protein of other animal caliciviruses."
    Neill J.D., Meyer R.F., Seal B.S.
    Virus Res. 54:39-50(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
  2. "Complete nucleotide sequence of the genomic RNA of vesicular exanthema of swine virus A48."
    Neill J.D., Seal B.S., Ridpath J.F.
    Submitted (AUG-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiVP2_VESVA
AccessioniPrimary (citable) accession number: P89682
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 30, 2010
Last sequence update: May 1, 1997
Last modified: January 7, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Miscellaneous

Translated by a ribosomal terminaition-reinitiation process from the bicistronic mRNA coding for VP1 and VP2.By similarity

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.