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P89522

- NCAP_CCHFI

UniProt

P89522 - NCAP_CCHFI

Protein

Nucleoprotein

Gene

N

Organism
Crimean-Congo hemorrhagic fever virus (strain Nigeria/IbAr10200/1970) (CCHFV)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 1 (01 May 1997)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. protein binding Source: UniProtKB
    2. RNA binding Source: UniProtKB-KW

    Keywords - Molecular functioni

    Ribonucleoprotein

    Keywords - Ligandi

    RNA-binding, Viral nucleoprotein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Nucleoprotein
    Alternative name(s):
    Nucleocapsid protein
    Short name:
    Protein N
    Gene namesi
    Name:N
    OrganismiCrimean-Congo hemorrhagic fever virus (strain Nigeria/IbAr10200/1970) (CCHFV)
    Taxonomic identifieri652961 [NCBI]
    Taxonomic lineageiVirusesssRNA negative-strand virusesBunyaviridaeNairovirus
    Virus hostiBos taurus (Bovine) [TaxID: 9913]
    Capra hircus (Goat) [TaxID: 9925]
    Homo sapiens (Human) [TaxID: 9606]
    Hyalomma [TaxID: 34625]
    Ovis aries (Sheep) [TaxID: 9940]
    Rhipicephalus microplus (Cattle tick) (Boophilus microplus) [TaxID: 6941]
    ProteomesiUP000008767: Genome

    Subcellular locationi

    Virion By similarity
    Note: Internal protein of virus particle.

    GO - Cellular componenti

    1. helical viral capsid Source: UniProtKB-KW
    2. ribonucleoprotein complex Source: UniProtKB-KW
    3. viral nucleocapsid Source: UniProtKB-KW

    Keywords - Cellular componenti

    Capsid protein, Helical capsid protein, Virion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 482482NucleoproteinPRO_0000406568Add
    BLAST

    Structurei

    Secondary structure

    1
    482
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi10 – 2112
    Beta strandi29 – 335
    Helixi44 – 507
    Helixi56 – 7116
    Turni72 – 743
    Helixi77 – 837
    Helixi86 – 9712
    Turni100 – 1034
    Helixi104 – 1085
    Helixi110 – 1134
    Helixi120 – 13718
    Helixi143 – 1453
    Helixi160 – 1623
    Helixi163 – 18119
    Helixi196 – 2049
    Turni205 – 2073
    Helixi209 – 2135
    Beta strandi227 – 2293
    Helixi230 – 24213
    Helixi245 – 26319
    Turni264 – 2674
    Helixi270 – 30031
    Helixi306 – 31611
    Turni321 – 3233
    Helixi324 – 33613
    Helixi341 – 35010
    Helixi355 – 3606
    Turni365 – 3673
    Helixi372 – 3743
    Turni382 – 3843
    Helixi385 – 3928
    Helixi400 – 4045
    Helixi410 – 4156
    Helixi420 – 4223
    Helixi425 – 43814
    Turni443 – 4453
    Helixi450 – 46011
    Beta strandi464 – 4663

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4AQFX-ray3.10A/B/C1-482[»]
    4AQGX-ray2.80A1-482[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Family and domain databases

    InterProiIPR003486. Nairo_nucleocap.
    [Graphical view]
    PfamiPF02477. Nairo_nucleo. 1 hit.
    [Graphical view]
    PIRSFiPIRSF003950. N_NairoV. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P89522-1 [UniParc]FASTAAdd to Basket

    « Hide

    MENKIEVNNK DEMNRWFEEF KKGNGLVDTF TNSYSFCESV PNLDRFVFQM    50
    ASATDDAQKD SIYASALVEA TKFCAPIYEC AWVSSTGIVK KGLEWFEKNA 100
    GTIKSWDESY TELKVDVPKI EQLTGYQQAA LKWRKDIGFR VNANTAALSN 150
    KVLAEYKVPG EIVMSVKEML SDMIRRRNLI LNRGGDENPR GPVSHEHVDW 200
    CREFVKGKYI MAFNPPWGDI NKSGRSGIAL VATGLAKLAE TEGKGIFDEA 250
    KKTVEALNGY LDKHKDEVDR ASADSMITNL LKHIAKAQEL YKNSSALRAQ 300
    SAQIDTAFSS YYWLYKAGVT PETFPTVSQF LFELGKQPRG TKKMKKALLS 350
    TPMKWGKKLY ELFADDSFQQ NRIYMHPAVL TAGRISEMGV CFGTIPVANP 400
    DDAAQGSGHT KSILNLRTNT ETNNPCAKTI VKLFEVQKTG FNIQDMDIVA 450
    SEHLLHQSLV GKQSPFQNAY NVKGNATSAN II 482
    Length:482
    Mass (Da):53,891
    Last modified:May 1, 1997 - v1
    Checksum:i3E37B8A17F1B8F5D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U88410 Genomic RNA. Translation: AAB48501.1.
    RefSeqiNP_950237.1. NC_005302.1.

    Genome annotation databases

    GeneIDi2943076.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U88410 Genomic RNA. Translation: AAB48501.1 .
    RefSeqi NP_950237.1. NC_005302.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4AQF X-ray 3.10 A/B/C 1-482 [» ]
    4AQG X-ray 2.80 A 1-482 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 2943076.

    Family and domain databases

    InterProi IPR003486. Nairo_nucleocap.
    [Graphical view ]
    Pfami PF02477. Nairo_nucleo. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF003950. N_NairoV. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Crimean-Congo hemorrhagic fever virus S segment."
      Lofts R., Hodgson L., Smith J.F.
      Submitted (FEB-1997) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

    Entry informationi

    Entry nameiNCAP_CCHFI
    AccessioniPrimary (citable) accession number: P89522
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 5, 2011
    Last sequence update: May 1, 1997
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3