Skip Header

Contribute Send feedback
Read comments (?) or add your own

P89522 (NCAP_CCHFI) Reviewed, UniProtKB/Swiss-Prot

Last modified January 9, 2013. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Nucleoprotein
Alternative name(s):
Nucleocapsid protein
Short name=Protein N
Gene names
Name:N
OrganismCrimean-Congo hemorrhagic fever virus (strain Nigeria/IbAr10200/1970) (CCHFV) [Reference proteome]
Taxonomic identifier652961 [NCBI]
Taxonomic lineageViruses › ssRNA negative-strand viruses › Bunyaviridae › Nairovirus ›
Virus hostBoophilus microplus (Cattle tick) [TaxID: 6941]
Bos taurus (Bovine) [TaxID: 9913]
Capra hircus (Goat) [TaxID: 9925]
Homo sapiens (Human) [TaxID: 9606]
Hyalomma [TaxID: 34625]
Ovis aries (Sheep) [TaxID: 9940]

Protein attributes

Sequence length482 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Subcellular location

Virion By similarity. Note: Internal protein of virus particle.

Sequence similarities

Belongs to the nairovirus nucleocapsid protein family.

Ontologies

Keywords
   Cellular componentVirion
   LigandRNA-binding
Viral nucleoprotein
   Molecular functionRibonucleoprotein
   Technical term3D-structure
Complete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentribonucleoprotein complex

Inferred from electronic annotation. Source: UniProtKB-KW

viral nucleocapsid

Inferred from electronic annotation. Source: InterPro

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 482482Nucleoprotein
PRO_0000406568

Secondary structure

1 ................................................................... 482
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P89522 [UniParc].

Last modified May 1, 1997. Version 1.
Checksum: 3E37B8A17F1B8F5D

FASTA48253,891
        10         20         30         40         50         60 
MENKIEVNNK DEMNRWFEEF KKGNGLVDTF TNSYSFCESV PNLDRFVFQM ASATDDAQKD 

        70         80         90        100        110        120 
SIYASALVEA TKFCAPIYEC AWVSSTGIVK KGLEWFEKNA GTIKSWDESY TELKVDVPKI 

       130        140        150        160        170        180 
EQLTGYQQAA LKWRKDIGFR VNANTAALSN KVLAEYKVPG EIVMSVKEML SDMIRRRNLI 

       190        200        210        220        230        240 
LNRGGDENPR GPVSHEHVDW CREFVKGKYI MAFNPPWGDI NKSGRSGIAL VATGLAKLAE 

       250        260        270        280        290        300 
TEGKGIFDEA KKTVEALNGY LDKHKDEVDR ASADSMITNL LKHIAKAQEL YKNSSALRAQ 

       310        320        330        340        350        360 
SAQIDTAFSS YYWLYKAGVT PETFPTVSQF LFELGKQPRG TKKMKKALLS TPMKWGKKLY 

       370        380        390        400        410        420 
ELFADDSFQQ NRIYMHPAVL TAGRISEMGV CFGTIPVANP DDAAQGSGHT KSILNLRTNT 

       430        440        450        460        470        480 
ETNNPCAKTI VKLFEVQKTG FNIQDMDIVA SEHLLHQSLV GKQSPFQNAY NVKGNATSAN 


II

« Hide

References

[1]"Crimean-Congo hemorrhagic fever virus S segment."
Lofts R., Hodgson L., Smith J.F.
Submitted (FEB-1997) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		U88410 Genomic RNA. Translation: AAB48501.1.
RefSeqNP_950237.1. NC_005302.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4AQFX-ray3.10A/B/C1-482[»]
4AQGX-ray2.80A1-482[»]
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID2943076.

Family and domain databases

InterProIPR003486. Nairo_nucleocap.
[Graphical view]
PfamPF02477. Nairo_nucleo. 1 hit.
[Graphical view]
PIRSFPIRSF003950. N_NairoV. 1 hit.
ProtoNetSearch...

Entry information

Entry nameNCAP_CCHFI
AccessionPrimary (citable) accession number: P89522
Entry history
Integrated into UniProtKB/Swiss-Prot: April 5, 2011
Last sequence update: May 1, 1997
Last modified: January 9, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents