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P89522

- NCAP_CCHFI

UniProt

P89522 - NCAP_CCHFI

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Protein

Nucleoprotein

Gene

N

Organism
Crimean-Congo hemorrhagic fever virus (strain Nigeria/IbAr10200/1970) (CCHFV)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. RNA binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein

Keywords - Ligandi

RNA-binding, Viral nucleoprotein

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleoprotein
Alternative name(s):
Nucleocapsid protein
Short name:
Protein N
Gene namesi
Name:N
OrganismiCrimean-Congo hemorrhagic fever virus (strain Nigeria/IbAr10200/1970) (CCHFV)
Taxonomic identifieri652961 [NCBI]
Taxonomic lineageiVirusesssRNA negative-strand virusesBunyaviridaeNairovirus
Virus hostiBos taurus (Bovine) [TaxID: 9913]
Capra hircus (Goat) [TaxID: 9925]
Homo sapiens (Human) [TaxID: 9606]
Hyalomma [TaxID: 34625]
Ovis aries (Sheep) [TaxID: 9940]
Rhipicephalus microplus (Cattle tick) (Boophilus microplus) [TaxID: 6941]
ProteomesiUP000008767: Genome

Subcellular locationi

Virion By similarity
Note: Internal protein of virus particle.

GO - Cellular componenti

  1. helical viral capsid Source: UniProtKB-KW
  2. ribonucleoprotein complex Source: UniProtKB-KW
  3. viral nucleocapsid Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Capsid protein, Helical capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 482482NucleoproteinPRO_0000406568Add
BLAST

Structurei

Secondary structure

1
482
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi10 – 2112Combined sources
Beta strandi29 – 335Combined sources
Helixi44 – 507Combined sources
Helixi56 – 7116Combined sources
Turni72 – 743Combined sources
Helixi77 – 837Combined sources
Helixi86 – 9712Combined sources
Turni100 – 1034Combined sources
Helixi104 – 1085Combined sources
Helixi110 – 1134Combined sources
Helixi120 – 13718Combined sources
Helixi143 – 1453Combined sources
Helixi160 – 1623Combined sources
Helixi163 – 18119Combined sources
Helixi196 – 2049Combined sources
Turni205 – 2073Combined sources
Helixi209 – 2135Combined sources
Beta strandi227 – 2293Combined sources
Helixi230 – 24213Combined sources
Helixi245 – 26319Combined sources
Turni264 – 2674Combined sources
Helixi270 – 30031Combined sources
Helixi306 – 31611Combined sources
Turni321 – 3233Combined sources
Helixi324 – 33613Combined sources
Helixi341 – 35010Combined sources
Helixi355 – 3606Combined sources
Turni365 – 3673Combined sources
Helixi372 – 3743Combined sources
Turni382 – 3843Combined sources
Helixi385 – 3928Combined sources
Helixi400 – 4045Combined sources
Helixi410 – 4156Combined sources
Helixi420 – 4223Combined sources
Helixi425 – 43814Combined sources
Turni443 – 4453Combined sources
Helixi450 – 46011Combined sources
Beta strandi464 – 4663Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4AQFX-ray3.10A/B/C1-482[»]
4AQGX-ray2.80A1-482[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR003486. Nairo_nucleocap.
[Graphical view]
PfamiPF02477. Nairo_nucleo. 1 hit.
[Graphical view]
PIRSFiPIRSF003950. N_NairoV. 1 hit.

Sequencei

Sequence statusi: Complete.

P89522-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MENKIEVNNK DEMNRWFEEF KKGNGLVDTF TNSYSFCESV PNLDRFVFQM
60 70 80 90 100
ASATDDAQKD SIYASALVEA TKFCAPIYEC AWVSSTGIVK KGLEWFEKNA
110 120 130 140 150
GTIKSWDESY TELKVDVPKI EQLTGYQQAA LKWRKDIGFR VNANTAALSN
160 170 180 190 200
KVLAEYKVPG EIVMSVKEML SDMIRRRNLI LNRGGDENPR GPVSHEHVDW
210 220 230 240 250
CREFVKGKYI MAFNPPWGDI NKSGRSGIAL VATGLAKLAE TEGKGIFDEA
260 270 280 290 300
KKTVEALNGY LDKHKDEVDR ASADSMITNL LKHIAKAQEL YKNSSALRAQ
310 320 330 340 350
SAQIDTAFSS YYWLYKAGVT PETFPTVSQF LFELGKQPRG TKKMKKALLS
360 370 380 390 400
TPMKWGKKLY ELFADDSFQQ NRIYMHPAVL TAGRISEMGV CFGTIPVANP
410 420 430 440 450
DDAAQGSGHT KSILNLRTNT ETNNPCAKTI VKLFEVQKTG FNIQDMDIVA
460 470 480
SEHLLHQSLV GKQSPFQNAY NVKGNATSAN II
Length:482
Mass (Da):53,891
Last modified:May 1, 1997 - v1
Checksum:i3E37B8A17F1B8F5D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U88410 Genomic RNA. Translation: AAB48501.1.
RefSeqiNP_950237.1. NC_005302.1.

Genome annotation databases

GeneIDi2943076.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U88410 Genomic RNA. Translation: AAB48501.1 .
RefSeqi NP_950237.1. NC_005302.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4AQF X-ray 3.10 A/B/C 1-482 [» ]
4AQG X-ray 2.80 A 1-482 [» ]
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 2943076.

Family and domain databases

InterProi IPR003486. Nairo_nucleocap.
[Graphical view ]
Pfami PF02477. Nairo_nucleo. 1 hit.
[Graphical view ]
PIRSFi PIRSF003950. N_NairoV. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Crimean-Congo hemorrhagic fever virus S segment."
    Lofts R., Hodgson L., Smith J.F.
    Submitted (FEB-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiNCAP_CCHFI
AccessioniPrimary (citable) accession number: P89522
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 5, 2011
Last sequence update: May 1, 1997
Last modified: November 26, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3