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P89522

- NCAP_CCHFI

UniProt

P89522 - NCAP_CCHFI

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Protein

Nucleoprotein

Gene
N
Organism
Crimean-Congo hemorrhagic fever virus (strain Nigeria/IbAr10200/1970) (CCHFV)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. protein binding Source: UniProtKB
  2. RNA binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein

Keywords - Ligandi

RNA-binding, Viral nucleoprotein

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleoprotein
Alternative name(s):
Nucleocapsid protein
Short name:
Protein N
Gene namesi
Name:N
OrganismiCrimean-Congo hemorrhagic fever virus (strain Nigeria/IbAr10200/1970) (CCHFV)
Taxonomic identifieri652961 [NCBI]
Taxonomic lineageiVirusesssRNA negative-strand virusesBunyaviridaeNairovirus
Virus hostiBos taurus (Bovine) [TaxID: 9913]
Capra hircus (Goat) [TaxID: 9925]
Homo sapiens (Human) [TaxID: 9606]
Hyalomma [TaxID: 34625]
Ovis aries (Sheep) [TaxID: 9940]
Rhipicephalus microplus (Cattle tick) (Boophilus microplus) [TaxID: 6941]
ProteomesiUP000008767: Genome

Subcellular locationi

Virion By similarity
Note: Internal protein of virus particle.

GO - Cellular componenti

  1. helical viral capsid Source: UniProtKB-KW
  2. ribonucleoprotein complex Source: UniProtKB-KW
  3. viral nucleocapsid Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Capsid protein, Helical capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 482482NucleoproteinPRO_0000406568Add
BLAST

Structurei

Secondary structure

1
482
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi10 – 2112
Beta strandi29 – 335
Helixi44 – 507
Helixi56 – 7116
Turni72 – 743
Helixi77 – 837
Helixi86 – 9712
Turni100 – 1034
Helixi104 – 1085
Helixi110 – 1134
Helixi120 – 13718
Helixi143 – 1453
Helixi160 – 1623
Helixi163 – 18119
Helixi196 – 2049
Turni205 – 2073
Helixi209 – 2135
Beta strandi227 – 2293
Helixi230 – 24213
Helixi245 – 26319
Turni264 – 2674
Helixi270 – 30031
Helixi306 – 31611
Turni321 – 3233
Helixi324 – 33613
Helixi341 – 35010
Helixi355 – 3606
Turni365 – 3673
Helixi372 – 3743
Turni382 – 3843
Helixi385 – 3928
Helixi400 – 4045
Helixi410 – 4156
Helixi420 – 4223
Helixi425 – 43814
Turni443 – 4453
Helixi450 – 46011
Beta strandi464 – 4663

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4AQFX-ray3.10A/B/C1-482[»]
4AQGX-ray2.80A1-482[»]

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR003486. Nairo_nucleocap.
[Graphical view]
PfamiPF02477. Nairo_nucleo. 1 hit.
[Graphical view]
PIRSFiPIRSF003950. N_NairoV. 1 hit.

Sequencei

Sequence statusi: Complete.

P89522-1 [UniParc]FASTAAdd to Basket

« Hide

MENKIEVNNK DEMNRWFEEF KKGNGLVDTF TNSYSFCESV PNLDRFVFQM    50
ASATDDAQKD SIYASALVEA TKFCAPIYEC AWVSSTGIVK KGLEWFEKNA 100
GTIKSWDESY TELKVDVPKI EQLTGYQQAA LKWRKDIGFR VNANTAALSN 150
KVLAEYKVPG EIVMSVKEML SDMIRRRNLI LNRGGDENPR GPVSHEHVDW 200
CREFVKGKYI MAFNPPWGDI NKSGRSGIAL VATGLAKLAE TEGKGIFDEA 250
KKTVEALNGY LDKHKDEVDR ASADSMITNL LKHIAKAQEL YKNSSALRAQ 300
SAQIDTAFSS YYWLYKAGVT PETFPTVSQF LFELGKQPRG TKKMKKALLS 350
TPMKWGKKLY ELFADDSFQQ NRIYMHPAVL TAGRISEMGV CFGTIPVANP 400
DDAAQGSGHT KSILNLRTNT ETNNPCAKTI VKLFEVQKTG FNIQDMDIVA 450
SEHLLHQSLV GKQSPFQNAY NVKGNATSAN II 482
Length:482
Mass (Da):53,891
Last modified:May 1, 1997 - v1
Checksum:i3E37B8A17F1B8F5D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U88410 Genomic RNA. Translation: AAB48501.1.
RefSeqiNP_950237.1. NC_005302.1.

Genome annotation databases

GeneIDi2943076.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U88410 Genomic RNA. Translation: AAB48501.1 .
RefSeqi NP_950237.1. NC_005302.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4AQF X-ray 3.10 A/B/C 1-482 [» ]
4AQG X-ray 2.80 A 1-482 [» ]
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 2943076.

Family and domain databases

InterProi IPR003486. Nairo_nucleocap.
[Graphical view ]
Pfami PF02477. Nairo_nucleo. 1 hit.
[Graphical view ]
PIRSFi PIRSF003950. N_NairoV. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Crimean-Congo hemorrhagic fever virus S segment."
    Lofts R., Hodgson L., Smith J.F.
    Submitted (FEB-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Entry informationi

Entry nameiNCAP_CCHFI
AccessioniPrimary (citable) accession number: P89522
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 5, 2011
Last sequence update: May 1, 1997
Last modified: June 11, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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