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P89521 (P89521_9VIRU) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
OrganismYellowtail ascites virus - Y-6 EMBL BAA22055.1
Taxonomic identifier360000 [NCBI]
Taxonomic lineageVirusesdsRNA virusesBirnaviridaeAquabirnavirus

Protein attributes

Sequence length972 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical term3D-structure PDB 4IZJ PDB 4IZK
Gene Ontology (GO)
   Molecular_functionstructural molecule activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Amino acid modifications

Modified residue6341Cysteine sulfenic acid (-SOH) PDB 4IZJ
Modified residue6691Cysteine sulfenic acid (-SOH) PDB 4IZJ PDB 4IZK

Sequences

Sequence LengthMass (Da)Tools
P89521 [UniParc].

Last modified May 1, 1997. Version 1.
Checksum: 4F9149F65966F226

FASTA972106,768
        10         20         30         40         50         60 
MNTTKATATY LRSIMLPENG PASIPDDITE RHILKQETSS YNLEVSDSGS GLLVCFPGAP 

        70         80         90        100        110        120 
GSRVGAHYKW NQNQTELEFD QWLETSQDLK KAFNYGRLIS RKYDVQSSTL PAGLYALNGT 

       130        140        150        160        170        180 
LNAATFEGSL SEVESFSYNS LMSLTTNPQD KVNNQLVTKG VTVLNLPTGF DKPYVRLEDE 

       190        200        210        220        230        240 
TPQGPQSMNG ARMRCTAAIA PRRYEIDLPS ARLPTVPATG TLTTIYEGNA DIVNSTTVTG 

       250        260        270        280        290        300 
DISFRLEQDP PNDTKYDFQL DFLGLDNNVP VVSITSSTLA TTDNYRGVSV KFTQSIPTET 

       310        320        330        340        350        360 
ITKPITRVKL SYKINQQTAI GNAATLGPLG PSSVSFSSGN GNVPGVLRPI TLVAYEKMTP 

       370        380        390        400        410        420 
QSILTVAGVS NYELIPNPEL LKNMVTKYGK YDPEGLNYAK MILSHREELD IRTVWRTEEY 

       430        440        450        460        470        480 
KERTRAFNEI TDFSSDLPTS KAWGWRDIVR GIRKVAAPVL STLFPMAAPL IGAADQFIGD 

       490        500        510        520        530        540 
LTKTNAAGGR YLTHAAGGRY TDVMDSWASG TDTGRFSRNL KDRLESNNYE EMELPPPTKG 

       550        560        570        580        590        600 
VIIPVVHTVE SAPGEAFGSL LVIIPGAYPE LLDPNQQVLS HFKNDTGCVW GIGEDIPFEG 

       610        620        630        640        650        660 
DDICYTALPL KEIKKNGNIV VEKVFAGPAM GPSCQLGLSL LVNDIDKGVP RMVFTGEIAN 

       670        680        690        700        710        720 
DEETIVPICG VDIKAIAAHE HGLPLVGCQP GVDEVVANTS LASHLIQSGA LPVQKAQGAS 

       730        740        750        760        770        780 
RRIKYLGELM RTTASGMDEE LQKLLHATMA RAKEVKDAEV FKLLKLMSWT RKNGLTDHMY 

       790        800        810        820        830        840 
EWSKEDPEAV KFGKLISTPP KHQEKPKGPD QHTAQEAKAV RISLDAVKAG ADFASPDWIA 

       850        860        870        880        890        900 
ENGYRGPSPG QFKYYVITGR VPDPRDEYED YVRKPITRPT DMDKIRRLAN SVYGLPHQEP 

       910        920        930        940        950        960 
APEEFYQAVV EIFAENGGRG PDQDQMQDLR DLARQMKRRP RPAETRRQNR APPRAAPSGS 

       970 
SRFTPSGDNG EV 

« Hide

References

[1]"The complete nucleotide sequence of the polyprotein and VP5 gene of a marine birnavirus."
Suzuki S., Kimura M., Kusuda R.
Fish. Sci. 64:428-433(1998)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Y-6 EMBL BAA22055.1.
[2]"Crystal structures of yellowtail ascites virus VP4 protease: trapping an internal cleavage site trans acyl-enzyme complex in a native Ser/Lys dyad active site."
Chung I.Y., Paetzel M.
J. Biol. Chem. 288:13068-13081(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) OF 508-716.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AB006783 Genomic RNA. Translation: BAA22055.1.
RefSeqNP_690805.1. NC_004168.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4IZJX-ray2.50A/B/C/D/E508-716[»]
4IZKX-ray2.30A/B508-716[»]
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

MEROPSS50.001.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID995355.

Family and domain databases

InterProIPR002662. Birna_VP2.
IPR002663. Birna_VP3.
IPR025775. Birna_VP4_Prtase_dom.
[Graphical view]
PfamPF01766. Birna_VP2. 1 hit.
PF01767. Birna_VP3. 1 hit.
PF01768. Birna_VP4. 1 hit.
[Graphical view]
PROSITEPS51548. BIRNAVIRUS_VP4_PRO. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameP89521_9VIRU
AccessionPrimary (citable) accession number: P89521
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: December 11, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)