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P89521

- P89521_9VIRU

UniProt

P89521 - P89521_9VIRU

Protein
Submitted name:

Polyprotein

Gene
N/A
Organism
Yellowtail ascites virus - Y-6
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 41 (01 Oct 2014)
      Sequence version 1 (01 May 1997)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural molecule activity Source: InterPro

    Protein family/group databases

    MEROPSiS50.001.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    PolyproteinImported
    OrganismiYellowtail ascites virus - Y-6Imported
    Taxonomic identifieri360000 [NCBI]
    Taxonomic lineageiVirusesdsRNA virusesBirnaviridaeAquabirnavirus

    PTM / Processingi

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei634 – 6341Cysteine sulfenic acid (-SOH)Imported
    Modified residuei669 – 6691Cysteine sulfenic acid (-SOH)Imported

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4IZJX-ray2.50A/B/C/D/E508-716[»]
    4IZKX-ray2.30A/B508-716[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Family and domain databases

    Gene3Di2.60.120.20. 2 hits.
    InterProiIPR002662. Birna_VP2.
    IPR002663. Birna_VP3.
    IPR025775. Birna_VP4_Prtase_dom.
    IPR029053. Viral_coat.
    [Graphical view]
    PfamiPF01766. Birna_VP2. 1 hit.
    PF01767. Birna_VP3. 1 hit.
    PF01768. Birna_VP4. 1 hit.
    [Graphical view]
    PROSITEiPS51548. BIRNAVIRUS_VP4_PRO. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P89521-1 [UniParc]FASTAAdd to Basket

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    MNTTKATATY LRSIMLPENG PASIPDDITE RHILKQETSS YNLEVSDSGS    50
    GLLVCFPGAP GSRVGAHYKW NQNQTELEFD QWLETSQDLK KAFNYGRLIS 100
    RKYDVQSSTL PAGLYALNGT LNAATFEGSL SEVESFSYNS LMSLTTNPQD 150
    KVNNQLVTKG VTVLNLPTGF DKPYVRLEDE TPQGPQSMNG ARMRCTAAIA 200
    PRRYEIDLPS ARLPTVPATG TLTTIYEGNA DIVNSTTVTG DISFRLEQDP 250
    PNDTKYDFQL DFLGLDNNVP VVSITSSTLA TTDNYRGVSV KFTQSIPTET 300
    ITKPITRVKL SYKINQQTAI GNAATLGPLG PSSVSFSSGN GNVPGVLRPI 350
    TLVAYEKMTP QSILTVAGVS NYELIPNPEL LKNMVTKYGK YDPEGLNYAK 400
    MILSHREELD IRTVWRTEEY KERTRAFNEI TDFSSDLPTS KAWGWRDIVR 450
    GIRKVAAPVL STLFPMAAPL IGAADQFIGD LTKTNAAGGR YLTHAAGGRY 500
    TDVMDSWASG TDTGRFSRNL KDRLESNNYE EMELPPPTKG VIIPVVHTVE 550
    SAPGEAFGSL LVIIPGAYPE LLDPNQQVLS HFKNDTGCVW GIGEDIPFEG 600
    DDICYTALPL KEIKKNGNIV VEKVFAGPAM GPSCQLGLSL LVNDIDKGVP 650
    RMVFTGEIAN DEETIVPICG VDIKAIAAHE HGLPLVGCQP GVDEVVANTS 700
    LASHLIQSGA LPVQKAQGAS RRIKYLGELM RTTASGMDEE LQKLLHATMA 750
    RAKEVKDAEV FKLLKLMSWT RKNGLTDHMY EWSKEDPEAV KFGKLISTPP 800
    KHQEKPKGPD QHTAQEAKAV RISLDAVKAG ADFASPDWIA ENGYRGPSPG 850
    QFKYYVITGR VPDPRDEYED YVRKPITRPT DMDKIRRLAN SVYGLPHQEP 900
    APEEFYQAVV EIFAENGGRG PDQDQMQDLR DLARQMKRRP RPAETRRQNR 950
    APPRAAPSGS SRFTPSGDNG EV 972
    Length:972
    Mass (Da):106,768
    Last modified:May 1, 1997 - v1
    Checksum:i4F9149F65966F226
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB006783 Genomic RNA. Translation: BAA22055.1.
    RefSeqiNP_690805.1. NC_004168.1.

    Genome annotation databases

    GeneIDi995355.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB006783 Genomic RNA. Translation: BAA22055.1 .
    RefSeqi NP_690805.1. NC_004168.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4IZJ X-ray 2.50 A/B/C/D/E 508-716 [» ]
    4IZK X-ray 2.30 A/B 508-716 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    MEROPSi S50.001.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 995355.

    Family and domain databases

    Gene3Di 2.60.120.20. 2 hits.
    InterProi IPR002662. Birna_VP2.
    IPR002663. Birna_VP3.
    IPR025775. Birna_VP4_Prtase_dom.
    IPR029053. Viral_coat.
    [Graphical view ]
    Pfami PF01766. Birna_VP2. 1 hit.
    PF01767. Birna_VP3. 1 hit.
    PF01768. Birna_VP4. 1 hit.
    [Graphical view ]
    PROSITEi PS51548. BIRNAVIRUS_VP4_PRO. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The complete nucleotide sequence of the polyprotein and VP5 gene of a marine birnavirus."
      Suzuki S., Kimura M., Kusuda R.
      Fish. Sci. 64:428-433(1998)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Y-6Imported.
    2. "Crystal structures of yellowtail ascites virus VP4 protease: trapping an internal cleavage site trans acyl-enzyme complex in a native Ser/Lys dyad active site."
      Chung I.Y., Paetzel M.
      J. Biol. Chem. 288:13068-13081(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) OF 508-716.

    Entry informationi

    Entry nameiP89521_9VIRU
    AccessioniPrimary (citable) accession number: P89521
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 1, 1997
    Last sequence update: May 1, 1997
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3