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P89521

- P89521_9VIRU

UniProt

P89521 - P89521_9VIRU

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Protein
Submitted name: Polyprotein
Gene
N/A
Organism
Yellowtail ascites virus - Y-6
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural molecule activity Source: InterPro
Complete GO annotation...

Protein family/group databases

MEROPSiS50.001.

Names & Taxonomyi

Protein namesi
Submitted name:
PolyproteinImported
OrganismiYellowtail ascites virus - Y-6Imported
Taxonomic identifieri360000 [NCBI]
Taxonomic lineageiVirusesdsRNA virusesBirnaviridaeAquabirnavirus

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei634 – 6341Cysteine sulfenic acid (-SOH)Imported
Modified residuei669 – 6691Cysteine sulfenic acid (-SOH)Imported

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4IZJX-ray2.50A/B/C/D/E508-716[»]
4IZKX-ray2.30A/B508-716[»]

Family & Domainsi

Family and domain databases

Gene3Di2.60.120.20. 2 hits.
InterProiIPR002662. Birna_VP2.
IPR002663. Birna_VP3.
IPR025775. Birna_VP4_Prtase_dom.
IPR029053. Viral_coat.
[Graphical view]
PfamiPF01766. Birna_VP2. 1 hit.
PF01767. Birna_VP3. 1 hit.
PF01768. Birna_VP4. 1 hit.
[Graphical view]
PROSITEiPS51548. BIRNAVIRUS_VP4_PRO. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P89521-1 [UniParc]FASTAAdd to Basket

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MNTTKATATY LRSIMLPENG PASIPDDITE RHILKQETSS YNLEVSDSGS    50
GLLVCFPGAP GSRVGAHYKW NQNQTELEFD QWLETSQDLK KAFNYGRLIS 100
RKYDVQSSTL PAGLYALNGT LNAATFEGSL SEVESFSYNS LMSLTTNPQD 150
KVNNQLVTKG VTVLNLPTGF DKPYVRLEDE TPQGPQSMNG ARMRCTAAIA 200
PRRYEIDLPS ARLPTVPATG TLTTIYEGNA DIVNSTTVTG DISFRLEQDP 250
PNDTKYDFQL DFLGLDNNVP VVSITSSTLA TTDNYRGVSV KFTQSIPTET 300
ITKPITRVKL SYKINQQTAI GNAATLGPLG PSSVSFSSGN GNVPGVLRPI 350
TLVAYEKMTP QSILTVAGVS NYELIPNPEL LKNMVTKYGK YDPEGLNYAK 400
MILSHREELD IRTVWRTEEY KERTRAFNEI TDFSSDLPTS KAWGWRDIVR 450
GIRKVAAPVL STLFPMAAPL IGAADQFIGD LTKTNAAGGR YLTHAAGGRY 500
TDVMDSWASG TDTGRFSRNL KDRLESNNYE EMELPPPTKG VIIPVVHTVE 550
SAPGEAFGSL LVIIPGAYPE LLDPNQQVLS HFKNDTGCVW GIGEDIPFEG 600
DDICYTALPL KEIKKNGNIV VEKVFAGPAM GPSCQLGLSL LVNDIDKGVP 650
RMVFTGEIAN DEETIVPICG VDIKAIAAHE HGLPLVGCQP GVDEVVANTS 700
LASHLIQSGA LPVQKAQGAS RRIKYLGELM RTTASGMDEE LQKLLHATMA 750
RAKEVKDAEV FKLLKLMSWT RKNGLTDHMY EWSKEDPEAV KFGKLISTPP 800
KHQEKPKGPD QHTAQEAKAV RISLDAVKAG ADFASPDWIA ENGYRGPSPG 850
QFKYYVITGR VPDPRDEYED YVRKPITRPT DMDKIRRLAN SVYGLPHQEP 900
APEEFYQAVV EIFAENGGRG PDQDQMQDLR DLARQMKRRP RPAETRRQNR 950
APPRAAPSGS SRFTPSGDNG EV 972
Length:972
Mass (Da):106,768
Last modified:May 1, 1997 - v1
Checksum:i4F9149F65966F226
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB006783 Genomic RNA. Translation: BAA22055.1.
RefSeqiNP_690805.1. NC_004168.1.

Genome annotation databases

GeneIDi995355.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB006783 Genomic RNA. Translation: BAA22055.1 .
RefSeqi NP_690805.1. NC_004168.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4IZJ X-ray 2.50 A/B/C/D/E 508-716 [» ]
4IZK X-ray 2.30 A/B 508-716 [» ]
ModBasei Search...

Protein family/group databases

MEROPSi S50.001.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 995355.

Family and domain databases

Gene3Di 2.60.120.20. 2 hits.
InterProi IPR002662. Birna_VP2.
IPR002663. Birna_VP3.
IPR025775. Birna_VP4_Prtase_dom.
IPR029053. Viral_coat.
[Graphical view ]
Pfami PF01766. Birna_VP2. 1 hit.
PF01767. Birna_VP3. 1 hit.
PF01768. Birna_VP4. 1 hit.
[Graphical view ]
PROSITEi PS51548. BIRNAVIRUS_VP4_PRO. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The complete nucleotide sequence of the polyprotein and VP5 gene of a marine birnavirus."
    Suzuki S., Kimura M., Kusuda R.
    Fish. Sci. 64:428-433(1998)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Y-6Imported.
  2. "Crystal structures of yellowtail ascites virus VP4 protease: trapping an internal cleavage site trans acyl-enzyme complex in a native Ser/Lys dyad active site."
    Chung I.Y., Paetzel M.
    J. Biol. Chem. 288:13068-13081(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) OF 508-716.

Entry informationi

Entry nameiP89521_9VIRU
AccessioniPrimary (citable) accession number: P89521
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: July 9, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3

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