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P89521

- P89521_9VIRU

UniProt

P89521 - P89521_9VIRU

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Protein
Submitted name:

Polyprotein

Gene
N/A
Organism
Yellowtail ascites virus - Y-6
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural molecule activity Source: InterPro
Complete GO annotation...

Protein family/group databases

MEROPSiS50.001.

Names & Taxonomyi

Protein namesi
Submitted name:
PolyproteinImported
OrganismiYellowtail ascites virus - Y-6Imported
Taxonomic identifieri360000 [NCBI]
Taxonomic lineageiVirusesdsRNA virusesBirnaviridaeAquabirnavirus

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4IZJX-ray2.50A/B/C/D/E508-716[»]
4IZKX-ray2.30A/B508-716[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

Gene3Di2.60.120.20. 2 hits.
InterProiIPR002662. Birna_VP2.
IPR002663. Birna_VP3.
IPR025775. Birna_VP4_Prtase_dom.
IPR029053. Viral_coat.
[Graphical view]
PfamiPF01766. Birna_VP2. 1 hit.
PF01767. Birna_VP3. 1 hit.
PF01768. Birna_VP4. 1 hit.
[Graphical view]
PROSITEiPS51548. BIRNAVIRUS_VP4_PRO. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P89521-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MNTTKATATY LRSIMLPENG PASIPDDITE RHILKQETSS YNLEVSDSGS
60 70 80 90 100
GLLVCFPGAP GSRVGAHYKW NQNQTELEFD QWLETSQDLK KAFNYGRLIS
110 120 130 140 150
RKYDVQSSTL PAGLYALNGT LNAATFEGSL SEVESFSYNS LMSLTTNPQD
160 170 180 190 200
KVNNQLVTKG VTVLNLPTGF DKPYVRLEDE TPQGPQSMNG ARMRCTAAIA
210 220 230 240 250
PRRYEIDLPS ARLPTVPATG TLTTIYEGNA DIVNSTTVTG DISFRLEQDP
260 270 280 290 300
PNDTKYDFQL DFLGLDNNVP VVSITSSTLA TTDNYRGVSV KFTQSIPTET
310 320 330 340 350
ITKPITRVKL SYKINQQTAI GNAATLGPLG PSSVSFSSGN GNVPGVLRPI
360 370 380 390 400
TLVAYEKMTP QSILTVAGVS NYELIPNPEL LKNMVTKYGK YDPEGLNYAK
410 420 430 440 450
MILSHREELD IRTVWRTEEY KERTRAFNEI TDFSSDLPTS KAWGWRDIVR
460 470 480 490 500
GIRKVAAPVL STLFPMAAPL IGAADQFIGD LTKTNAAGGR YLTHAAGGRY
510 520 530 540 550
TDVMDSWASG TDTGRFSRNL KDRLESNNYE EMELPPPTKG VIIPVVHTVE
560 570 580 590 600
SAPGEAFGSL LVIIPGAYPE LLDPNQQVLS HFKNDTGCVW GIGEDIPFEG
610 620 630 640 650
DDICYTALPL KEIKKNGNIV VEKVFAGPAM GPSCQLGLSL LVNDIDKGVP
660 670 680 690 700
RMVFTGEIAN DEETIVPICG VDIKAIAAHE HGLPLVGCQP GVDEVVANTS
710 720 730 740 750
LASHLIQSGA LPVQKAQGAS RRIKYLGELM RTTASGMDEE LQKLLHATMA
760 770 780 790 800
RAKEVKDAEV FKLLKLMSWT RKNGLTDHMY EWSKEDPEAV KFGKLISTPP
810 820 830 840 850
KHQEKPKGPD QHTAQEAKAV RISLDAVKAG ADFASPDWIA ENGYRGPSPG
860 870 880 890 900
QFKYYVITGR VPDPRDEYED YVRKPITRPT DMDKIRRLAN SVYGLPHQEP
910 920 930 940 950
APEEFYQAVV EIFAENGGRG PDQDQMQDLR DLARQMKRRP RPAETRRQNR
960 970
APPRAAPSGS SRFTPSGDNG EV
Length:972
Mass (Da):106,768
Last modified:May 1, 1997 - v1
Checksum:i4F9149F65966F226
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB006783 Genomic RNA. Translation: BAA22055.1.
RefSeqiNP_690805.1. NC_004168.1.

Genome annotation databases

GeneIDi995355.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB006783 Genomic RNA. Translation: BAA22055.1 .
RefSeqi NP_690805.1. NC_004168.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4IZJ X-ray 2.50 A/B/C/D/E 508-716 [» ]
4IZK X-ray 2.30 A/B 508-716 [» ]
ModBasei Search...
MobiDBi Search...

Protein family/group databases

MEROPSi S50.001.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 995355.

Family and domain databases

Gene3Di 2.60.120.20. 2 hits.
InterProi IPR002662. Birna_VP2.
IPR002663. Birna_VP3.
IPR025775. Birna_VP4_Prtase_dom.
IPR029053. Viral_coat.
[Graphical view ]
Pfami PF01766. Birna_VP2. 1 hit.
PF01767. Birna_VP3. 1 hit.
PF01768. Birna_VP4. 1 hit.
[Graphical view ]
PROSITEi PS51548. BIRNAVIRUS_VP4_PRO. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The complete nucleotide sequence of the polyprotein and VP5 gene of a marine birnavirus."
    Suzuki S., Kimura M., Kusuda R.
    Fish. Sci. 64:428-433(1998)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Y-6Imported.
  2. "Crystal structures of yellowtail ascites virus VP4 protease: trapping an internal cleavage site trans acyl-enzyme complex in a native Ser/Lys dyad active site."
    Chung I.Y., Paetzel M.
    J. Biol. Chem. 288:13068-13081(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) OF 508-716, ACTIVE SITE.

Entry informationi

Entry nameiP89521_9VIRU
AccessioniPrimary (citable) accession number: P89521
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: November 26, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3