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Protein
Submitted name:

Rep protein

Gene

rep

Organism
Tomato yellow vein streak virus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Rep proteinImported
Gene namesi
Name:repImported
OrganismiTomato yellow vein streak virusImported
Taxonomic identifieri55216 [NCBI]
Taxonomic lineageiVirusesssDNA virusesGeminiviridaeBegomovirus

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliP89217.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini7 – 106100Gemini_AL1InterPro annotationAdd
BLAST

Family and domain databases

InterProiIPR001301. Gemini_AL1_CLV.
IPR001191. Gemini_AL1_REP.
IPR022690. Gemini_AL1_REP_cat-dom.
[Graphical view]
PfamiPF00799. Gemini_AL1. 1 hit.
[Graphical view]
PRINTSiPR00227. GEMCOATAL1.
PR00228. GEMCOATCLVL1.

Sequencei

Sequence statusi: Complete.

P89217-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPPPKRFSVN AKNFFLTYPH CSLTKDEALS QLQALQTPTN KKFIRVTREL
60 70 80 90 100
HEDGEPHLHV LIQFEGKFIC HNQRFFDLVS PTRSAHFHPN IQGAKSSSDS
110 120 130 140
RPTWRKTETS LILELSKSME DQLEEVANLQ TTLMPRFSTQ IIHPRHSIY
Length:149
Mass (Da):17,297
Last modified:May 1, 1997 - v1
Checksum:i6A1FDAB36848894F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U79998 Genomic DNA. Translation: AAB40392.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U79998 Genomic DNA. Translation: AAB40392.1.

3D structure databases

ProteinModelPortaliP89217.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR001301. Gemini_AL1_CLV.
IPR001191. Gemini_AL1_REP.
IPR022690. Gemini_AL1_REP_cat-dom.
[Graphical view]
PfamiPF00799. Gemini_AL1. 1 hit.
[Graphical view]
PRINTSiPR00227. GEMCOATAL1.
PR00228. GEMCOATCLVL1.
ProtoNetiSearch...

Entry informationi

Entry nameiP89217_9GEMI
AccessioniPrimary (citable) accession number: P89217
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: March 16, 2016
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.