Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

P89035 (MP6_PMVK) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Putative movement protein p6.6
Gene names
ORF Names:ORF2bis
OrganismPanicum mosaic virus (strain United States/Kansas 109S) (PMV) [Reference proteome]
Taxonomic identifier652599 [NCBI]
Taxonomic lineageVirusesssRNA positive-strand viruses, no DNA stageTombusviridaePanicovirus
Virus hostMuhlenbergia [TaxID: 58090]
Panicum virgatum (Switchgrass) [TaxID: 38727]

Protein attributes

Sequence length59 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Cell-to-cell movement Potential.

Subcellular location

Membrane; Single-pass membrane protein Potential.

Caution

The putative 14.6-kDa frameshift protein (p8-FS) cited in Ref.1 has not been detected by in vitro translation assays in Ref.2. A 6.6 kDa product corresponding to the same product without the N-terminus shared with p8 seems to be encoded instead in the same region.

Starts with an unusual GUG codon.

Sequence caution

The sequence AAC97554.1 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   Biological processTransport
   Cellular componentMembrane
   DomainTransmembrane
Transmembrane helix
   Molecular functionViral movement protein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtransport of virus in host, cell to cell

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 5959Putative movement protein p6.6
PRO_0000399492

Regions

Transmembrane13 – 3523Helical; Potential
Compositional bias17 – 2812Poly-Leu

Sequences

Sequence LengthMass (Da)Tools
P89035 [UniParc].

Last modified October 5, 2010. Version 2.
Checksum: 36B98FFF980408A4

FASTA596,797
        10         20         30         40         50 
MATGKCYCPE DPRVGPLLVL CLLLLLILFS RSWNVAPVVV PSYHTVYHHE KYQNIEIQK 

« Hide

References

[1]"Nucleotide sequence and infectivity of a full-length cDNA clone of panicum mosaic virus."
Turina M., Maruoka M., Monis J., Jackson A.O., Scholthof K.B.
Virology 241:141-155(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
[2]"A gene cluster encoded by panicum mosaic virus is associated with virus movement."
Turina M., Desvoyes B., Scholthof K.B.
Virology 266:120-128(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: CHARACTERIZATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U55002 Genomic RNA. Translation: AAC97554.1. Sequence problems.
RefSeqNP_068344.1. NC_002598.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID912247.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameMP6_PMVK
AccessionPrimary (citable) accession number: P89035
Entry history
Integrated into UniProtKB/Swiss-Prot: October 5, 2010
Last sequence update: October 5, 2010
Last modified: February 19, 2014
This is version 32 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program