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Protein
Submitted name:

ORF 37

Gene
N/A
Organism
Human herpesvirus 8 type M
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi184 – 1841MagnesiumCombined sources
Metal bindingi221 – 2211MagnesiumCombined sources
Metal bindingi244 – 2441MagnesiumCombined sources
Metal bindingi245 – 2451Magnesium; via carbonyl oxygenCombined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

MagnesiumCombined sources, Metal-bindingCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
ORF 37Imported
OrganismiHuman herpesvirus 8 type MImported
Taxonomic identifieri435895 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageHerpesviralesHerpesviridaeGammaherpesvirinaeRhadinovirus

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
P889392EBI-7922402,EBI-7922395

Protein-protein interaction databases

IntActiP88925. 3 interactions.
MINTiMINT-2824695.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3FHDX-ray1.85A1-486[»]
3POVX-ray2.50A1-486[»]
ProteinModelPortaliP88925.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP88925.

Family & Domainsi

Family and domain databases

Gene3Di3.90.320.10. 1 hit.
InterProiIPR011604. Exonuc_phg/RecB_C.
IPR001616. Herpes_alk_exo.
IPR011335. Restrct_endonuc-II-like.
[Graphical view]
PfamiPF01771. Herpes_alk_exo. 1 hit.
[Graphical view]
PRINTSiPR00924. ALKEXNUCLASE.
SUPFAMiSSF52980. SSF52980. 1 hit.

Sequencei

Sequence statusi: Complete.

P88925-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEATPTPADL FSEDYLVDTL DGLTVDDQQA VLASLSFSKF LKHAKVRDWC
60 70 80 90 100
AQAKIQPSMP ALRMAYNYFL FSKVGEFIGS EDVCNFFVDR VFGGVRLLDV
110 120 130 140 150
ASVYAACSQM NAHQRHHICC LVERATSSQS LNPVWDALRD GIISSSKFHW
160 170 180 190 200
AVKQQNTSKK IFSPWPITNN HFVAGPLAFG LRCEEVVKTL LATLLHPDET
210 220 230 240 250
NCLDYGFMQS PQNGIFGVSL DFAANVKTDT EGRLQFDPNC KVYEIKCRFK
260 270 280 290 300
YTFAKMECDP IYAAYQRLYE APGKLALKDF FYSISKPAVE YVGLGKLPSE
310 320 330 340 350
SDYLVAYDQE WEACPRKKRK LTPLHNLIRE CILHNSTTES DVYVLTDPQD
360 370 380 390 400
TRGQISIKAR FKANLFVNVR HSYFYQVLLQ SSIVEEYIGL DSGIPRLGSP
410 420 430 440 450
KYYIATGFFR KRGYQDPVNC TIGGDALDPH VEIPTLLIVT PVYFPRGAKH
460 470 480
RLLHQAANFW SRSAKDTFPY IKWDFSYLSA NVPHSP
Length:486
Mass (Da):55,106
Last modified:May 1, 1997 - v1
Checksum:iBC8A46991065AF9E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U75698 Genomic DNA. Translation: AAC57119.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U75698 Genomic DNA. Translation: AAC57119.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3FHDX-ray1.85A1-486[»]
3POVX-ray2.50A1-486[»]
ProteinModelPortaliP88925.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP88925. 3 interactions.
MINTiMINT-2824695.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiP88925.

Family and domain databases

Gene3Di3.90.320.10. 1 hit.
InterProiIPR011604. Exonuc_phg/RecB_C.
IPR001616. Herpes_alk_exo.
IPR011335. Restrct_endonuc-II-like.
[Graphical view]
PfamiPF01771. Herpes_alk_exo. 1 hit.
[Graphical view]
PRINTSiPR00924. ALKEXNUCLASE.
SUPFAMiSSF52980. SSF52980. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiP88925_HHV8
AccessioniPrimary (citable) accession number: P88925
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: March 16, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.