P88804 (P88804_HPVR7) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: Major capsid protein L1 EMBL AAB61639.1
Organism	Human papillomavirus type RTRX7 EMBL AAB61639.1
Taxonomic identifier	79691 [NCBI]
Taxonomic lineage	Viruses › dsDNA viruses, no RNA stage › Papillomaviridae › Betapapillomavirus › Betapapillomavirus 1
Virus host	Homo sapiens (Human) [TaxID: 9606]

Protein attributes

Sequence length	516 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Host-virus interaction Viral attachment to host cell SAAS SAAS011222 Virus entry into host cell
Cellular component	Virion
Molecular function	Capsid protein SAAS SAAS011222
Gene Ontology (GO)
Biological_process	viral attachment to host cell Inferred from electronic annotation. Source: UniProtKB-KW viral entry into host cell Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	viral capsid Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	structural molecule activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	P88804 [UniParc]. Last modified January 1, 1998. Version 2. Checksum: 659AFA0AC42F4A42	FASTA	516	58,876
	10 20 30 40 50 60 MAVWHSANGK VYLPPSTPVA RVQSTDEYIQ RTNIYYHANT DRLLTVGHPY FNVYDNTGKK 70 80 90 100 110 120 LEVPKVSGNQ HRVFRLKLPD PNRFALADKS VYNPDKERLV WGCRGLEISR GQPLGVGSTG 130 140 150 160 170 180 HPYFNKVKDT ENTNNYTTGS TDDRQNTSFD PKQIQMFIVG CTPCVGEHWE KALPCGDAPA 190 200 210 220 230 240 DNGICPPIEL KNTFIEDGDM ADIGFGNMNF KTLQQNRADV SLDIVNETCK YPDFLKMQND 250 260 270 280 290 300 VYGDACFFYA RREQCYARHF FVRGRKTGDN IPDAYIDDGN MKNSFYIPAA SNQSQKDIGN 310 320 330 340 350 360 AMYFPTVSGS LVSSDAQLFN RPFWLQRAQG HNNGILWANQ MFVTVVDNTR NTNFSISISS 370 380 390 400 410 420 ENQDIQQIQS YDSQKFREYL RHVEEYEISI ILQLCKIPLQ AEVLAQINAM NPSLLEDWQL 430 440 450 460 470 480 GFVPTPDNPI QDTYRFIDSL ATRCPDKNPP KEKPDPYEKL TFWNVDLTER LSLDLDQYSL 490 500 510 GRKFLFQAGL QQTTVNGTKP STYRSSVRGI KRKRKN

References

[1]

"Human papillomavirus DNA in non-melanoma skin cancers of a renal transplant recipient: detection of a new sequence related to epidermodysplasia verruciformis associated types." Hopfl R., Bens G., Wieland U., Petter A., Zelger B., Fritsch P., Pfister H. J. Invest. Dermatol. 108:53-56(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: RTRX7 EMBL AAB61639.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U85660 Genomic DNA. Translation: AAB61639.1.
3D structure databases
HSSP	HSSP built from PDB template 1DZL based on UniProtKB Q9WPH4.
ProteinModelPortal	P88804.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Phylogenomic databases
ProtClustDB	PHA2778.
Family and domain databases
Gene3D	2.60.175.20. 1 hit.
InterPro	IPR002210. Capsid_L1_Papillomavir. IPR011222. dsDNA_vir_gr_I_capsid. [Graphical view]
Pfam	PF00500. Late_protein_L1. 1 hit. [Graphical view]
PRINTS	PR00865. HPVCAPSIDL1.
SUPFAM	SSF88648. dsDNA_vir_gr_I_capsid. 1 hit.
ProtoNet	Search...

Entry information

Entry name

P88804_HPVR7

Accession

Primary (citable) accession number: P88804

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 1997
Last sequence update:	January 1, 1998
Last modified:	April 3, 2013
This is version 70 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)