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Protein

60S ribosomal protein L34-A

Gene

RPL34A

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • RNA binding Source: GO_Central
  • structural constituent of ribosome Source: SGD

GO - Biological processi

  • cytoplasmic translation Source: SGD
  • ribosome biogenesis Source: SGD
  • translation Source: GO_Central
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciYEAST:G3O-30350-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L34-A
Gene namesi
Name:RPL34A
Ordered Locus Names:YER056C-A
ORF Names:YER056BC
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome V

Organism-specific databases

EuPathDBiFungiDB:YER056C-A.
SGDiS000002135. RPL34A.

Subcellular locationi

GO - Cellular componenti

  • cytosolic large ribosomal subunit Source: GO_Central
  • preribosome, large subunit precursor Source: SGD
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001318451 – 12160S ribosomal protein L34-AAdd BLAST121

Proteomic databases

MaxQBiP87262.
PRIDEiP87262.

PTM databases

iPTMnetiP87262.

Interactioni

Subunit structurei

Component of the large ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains 32 different proteins (encoded by 56 genes) and 1 molecule of RNA (18S). The 60S subunit contains 46 different proteins (encoded by 81 genes) and 3 molecules of RNA (25S, 5.8S and 5S).1 Publication

Protein-protein interaction databases

BioGridi36797. 33 interactors.
IntActiP87262. 13 interactors.
MINTiMINT-8285618.

Structurei

Secondary structure

1121
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi8 – 10Combined sources3
Helixi16 – 18Combined sources3
Beta strandi19 – 24Combined sources6
Turni26 – 28Combined sources3
Beta strandi30 – 35Combined sources6
Turni45 – 47Combined sources3
Beta strandi52 – 54Combined sources3
Helixi59 – 64Combined sources6
Helixi67 – 70Combined sources4
Turni75 – 79Combined sources5
Helixi83 – 111Combined sources29

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3J6Xelectron microscopy6.10741-121[»]
3J6Yelectron microscopy6.10741-121[»]
3J77electron microscopy6.20841-121[»]
3J78electron microscopy6.30841-121[»]
3JCTelectron microscopy3.08g1-121[»]
4U3MX-ray3.00O4/o42-121[»]
4U3NX-ray3.20O4/o42-121[»]
4U3UX-ray2.90O4/o42-121[»]
4U4NX-ray3.10O4/o42-121[»]
4U4OX-ray3.60O4/o42-109[»]
4U4QX-ray3.00O4/o42-120[»]
4U4RX-ray2.80O4/o42-121[»]
4U4UX-ray3.00O4/o42-121[»]
4U4YX-ray3.20O4/o42-120[»]
4U4ZX-ray3.10O4/o42-109[»]
4U50X-ray3.20O4/o42-120[»]
4U51X-ray3.20O4/o42-120[»]
4U52X-ray3.00O4/o42-109[»]
4U53X-ray3.30O4/o42-121[»]
4U55X-ray3.20O4/o42-120[»]
4U56X-ray3.45O4/o42-120[»]
4U6FX-ray3.10O4/o42-120[»]
4V6Ielectron microscopy8.80Bi1-118[»]
4V7Felectron microscopy8.70f1-121[»]
4V88X-ray3.00Bg/Dg1-121[»]
4V8Telectron microscopy8.10g1-121[»]
4V8Yelectron microscopy4.30Bg2-121[»]
4V8Zelectron microscopy6.60Bg2-121[»]
4V91electron microscopy3.70g1-121[»]
5APNelectron microscopy3.91g1-121[»]
5APOelectron microscopy3.41g1-121[»]
5DATX-ray3.15O4/o42-121[»]
5DC3X-ray3.25O4/o42-121[»]
5FCIX-ray3.40O4/o42-121[»]
5FCJX-ray3.10O4/o42-121[»]
5FL8electron microscopy9.50g1-121[»]
5GAKelectron microscopy3.88i1-121[»]
5I4LX-ray3.10O4/o42-113[»]
5JUOelectron microscopy4.00LA1-121[»]
5JUPelectron microscopy3.50LA1-121[»]
5JUSelectron microscopy4.20LA1-121[»]
5JUTelectron microscopy4.00LA1-121[»]
5JUUelectron microscopy4.00LA1-121[»]
ProteinModelPortaliP87262.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L34e family.Curated

Phylogenomic databases

GeneTreeiENSGT00840000131872.
HOGENOMiHOG000216922.
InParanoidiP87262.
KOiK02915.
OMAiKRPNRPY.
OrthoDBiEOG092C5L2Y.

Family and domain databases

InterProiIPR008195. Ribosomal_L34Ae.
IPR018065. Ribosomal_L34e_CS.
[Graphical view]
PANTHERiPTHR10759. PTHR10759. 1 hit.
PfamiPF01199. Ribosomal_L34e. 1 hit.
[Graphical view]
PRINTSiPR01250. RIBOSOMALL34.
PROSITEiPS01145. RIBOSOMAL_L34E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P87262-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAQRVTFRRR NPYNTRSNKI KVVKTPGGIL RAQHVKKLAT RPKCGDCGSA
60 70 80 90 100
LQGISTLRPR QYATVSKTHK TVSRAYGGSR CANCVKERII RAFLIEEQKI
110 120
VKKVVKEQTE AAKKSEKKAK K
Length:121
Mass (Da):13,639
Last modified:July 1, 1997 - v1
Checksum:iF3315816CD85ACEA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18813 Genomic DNA. Translation: AAB64609.1.
BK006939 Genomic DNA. Translation: DAA07714.1.
PIRiS53549.
RefSeqiNP_010977.2. NM_001180036.1.

Genome annotation databases

EnsemblFungiiYER056C-A; YER056C-A; YER056C-A.
GeneIDi856784.
KEGGisce:YER056C-A.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18813 Genomic DNA. Translation: AAB64609.1.
BK006939 Genomic DNA. Translation: DAA07714.1.
PIRiS53549.
RefSeqiNP_010977.2. NM_001180036.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3J6Xelectron microscopy6.10741-121[»]
3J6Yelectron microscopy6.10741-121[»]
3J77electron microscopy6.20841-121[»]
3J78electron microscopy6.30841-121[»]
3JCTelectron microscopy3.08g1-121[»]
4U3MX-ray3.00O4/o42-121[»]
4U3NX-ray3.20O4/o42-121[»]
4U3UX-ray2.90O4/o42-121[»]
4U4NX-ray3.10O4/o42-121[»]
4U4OX-ray3.60O4/o42-109[»]
4U4QX-ray3.00O4/o42-120[»]
4U4RX-ray2.80O4/o42-121[»]
4U4UX-ray3.00O4/o42-121[»]
4U4YX-ray3.20O4/o42-120[»]
4U4ZX-ray3.10O4/o42-109[»]
4U50X-ray3.20O4/o42-120[»]
4U51X-ray3.20O4/o42-120[»]
4U52X-ray3.00O4/o42-109[»]
4U53X-ray3.30O4/o42-121[»]
4U55X-ray3.20O4/o42-120[»]
4U56X-ray3.45O4/o42-120[»]
4U6FX-ray3.10O4/o42-120[»]
4V6Ielectron microscopy8.80Bi1-118[»]
4V7Felectron microscopy8.70f1-121[»]
4V88X-ray3.00Bg/Dg1-121[»]
4V8Telectron microscopy8.10g1-121[»]
4V8Yelectron microscopy4.30Bg2-121[»]
4V8Zelectron microscopy6.60Bg2-121[»]
4V91electron microscopy3.70g1-121[»]
5APNelectron microscopy3.91g1-121[»]
5APOelectron microscopy3.41g1-121[»]
5DATX-ray3.15O4/o42-121[»]
5DC3X-ray3.25O4/o42-121[»]
5FCIX-ray3.40O4/o42-121[»]
5FCJX-ray3.10O4/o42-121[»]
5FL8electron microscopy9.50g1-121[»]
5GAKelectron microscopy3.88i1-121[»]
5I4LX-ray3.10O4/o42-113[»]
5JUOelectron microscopy4.00LA1-121[»]
5JUPelectron microscopy3.50LA1-121[»]
5JUSelectron microscopy4.20LA1-121[»]
5JUTelectron microscopy4.00LA1-121[»]
5JUUelectron microscopy4.00LA1-121[»]
ProteinModelPortaliP87262.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi36797. 33 interactors.
IntActiP87262. 13 interactors.
MINTiMINT-8285618.

PTM databases

iPTMnetiP87262.

Proteomic databases

MaxQBiP87262.
PRIDEiP87262.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYER056C-A; YER056C-A; YER056C-A.
GeneIDi856784.
KEGGisce:YER056C-A.

Organism-specific databases

EuPathDBiFungiDB:YER056C-A.
SGDiS000002135. RPL34A.

Phylogenomic databases

GeneTreeiENSGT00840000131872.
HOGENOMiHOG000216922.
InParanoidiP87262.
KOiK02915.
OMAiKRPNRPY.
OrthoDBiEOG092C5L2Y.

Enzyme and pathway databases

BioCyciYEAST:G3O-30350-MONOMER.

Miscellaneous databases

PROiP87262.

Family and domain databases

InterProiIPR008195. Ribosomal_L34Ae.
IPR018065. Ribosomal_L34e_CS.
[Graphical view]
PANTHERiPTHR10759. PTHR10759. 1 hit.
PfamiPF01199. Ribosomal_L34e. 1 hit.
[Graphical view]
PRINTSiPR01250. RIBOSOMALL34.
PROSITEiPS01145. RIBOSOMAL_L34E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRL34A_YEAST
AccessioniPrimary (citable) accession number: P87262
Secondary accession number(s): D3DLW0, Q03189
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: July 1, 1997
Last modified: November 30, 2016
This is version 124 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 23600 molecules/cell in log phase SD medium.1 Publication
There are 2 genes for L34 in yeast.

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families
  4. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  5. Yeast chromosome V
    Yeast (Saccharomyces cerevisiae) chromosome V: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.