P87217 (P87217_9ASCO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protopectinases SE3 EMBL BAA20427.1

Gene names

Name:

PSE3 EMBL BAA20427.1

Organism

Geotrichum klebahnii EMBL BAA20427.1

Taxonomic identifier

44065 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Dipodascaceae › mitosporic Dipodascaceae › Geotrichum

Protein attributes

Sequence length	367 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 28 family. RuleBase RU000404

Ontologies

Keywords
Biological process	Cell wall biogenesis/degradation SAAS SAAS000743 RuleBase RU000404
Cellular component	Secreted SAAS SAAS000743
Molecular function	Glycosidase SAAS SAAS000743 RuleBase RU000404 Hydrolase
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro cellular cell wall organization Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	polygalacturonase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	P87217 [UniParc]. Last modified July 1, 1997. Version 1. Checksum: 2B81C66982470E3C	FASTA	367	37,968
	10 20 30 40 50 60 MLFSKSAIFA MAALAVAAPT EGDLQARGSA CVFKDAKSAI AGKKSCSSIT LENIAVPAGQ 70 80 90 100 110 120 TLDLTGLAKG TVVTFAGTTT FGYKEWAGPL ISVSGDSITV KQASGGKIDC GGSRWWDGKG 130 140 150 160 170 180 SNSGGKQKPK FFYAHKLQNS NIQGLQVYNT PVQAFSILSD HLTLSNILVD NRAGDKAGGH 190 200 210 220 230 240 NTDAFDVGTS TYITIDHATV YNQDDCLAIN SGDHITFQNG FCSGGHGLSI GSVGGRSLNT 250 260 270 280 290 300 VSNVNILNSQ VVNSDNGVRI KTISGATGSV SGVKFQDITL SNIAKYGIDV QQDYRNGGPT 310 320 330 340 350 360 GNPTNGVKIT GIEFINIHGS VKSSGTNAYL LCGSGSCSNW TWSKINVKGG KDSGACKNVP SGATCKL

References

[1]	"Cloning of a protopectinase gene of Trichosporon penicillatum and its expression in Saccharomyces cerevisiae." Iguchi K., Hirano H., Kishida M., Kawasaki H., Sakai T. Microbiology (Mosc.) 143:1657-1664(1997) Cited for: NUCLEOTIDE SEQUENCE. Strain: B2 EMBL BAA20427.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	D89650 Genomic DNA. Translation: BAA20427.1.
3D structure databases
HSSP	HSSP built from PDB template 1IB4 based on UniProtKB O74213.
ProteinModelPortal	P87217.
SMR	P87217. Positions 29-363.
ModBase	Search...
Protein family/group databases
CAZy	GH28. Glycoside Hydrolase Family 28.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR000743. Glyco_hydro_28. IPR006626. PbH1. IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
Pfam	PF00295. Glyco_hydro_28. 1 hit. [Graphical view]
SMART	SM00710. PbH1. 5 hits. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
PROSITE	PS00502. POLYGALACTURONASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

P87217_9ASCO

Accession

Primary (citable) accession number: P87217

Entry history

Integrated into UniProtKB/TrEMBL:	July 1, 1997
Last sequence update:	July 1, 1997
Last modified:	January 25, 2012
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)