P87217 (P87217_9ASCO) Unreviewed, UniProtKB/TrEMBL
Last modified
January 25, 2012.
Version 58.
History...
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Submitted name: Protopectinases SE3 EMBL BAA20427.1 | ||
| Gene names |
| ||
| Organism | Geotrichum klebahnii EMBL BAA20427.1 | ||
| Taxonomic identifier | 44065 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Dipodascaceae › mitosporic Dipodascaceae › Geotrichum |
Protein attributes
| Sequence length | 367 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Sequence similarities | Belongs to the glycosyl hydrolase 28 family. RuleBase RU000404 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Cell wall biogenesis/degradation SAAS SAAS000743 RuleBase RU000404 |
| Cellular component | Secreted SAAS SAAS000743 |
| Molecular function | Glycosidase SAAS SAAS000743 RuleBase RU000404 Hydrolase |
| Gene Ontology (GO) | |
| Biological process | carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro cellular cell wall organizationInferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | polygalacturonase activity Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| [1] | "Cloning of a protopectinase gene of Trichosporon penicillatum and its expression in Saccharomyces cerevisiae." Iguchi K., Hirano H., Kishida M., Kawasaki H., Sakai T. Microbiology (Mosc.) 143:1657-1664(1997) Cited for: NUCLEOTIDE SEQUENCE. Strain: B2 EMBL BAA20427.1. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | D89650 Genomic DNA. Translation: BAA20427.1. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1IB4 based on UniProtKB O74213. |
| ProteinModelPortal | P87217. |
| SMR | P87217. Positions 29-363. |
| ModBase | Search... |
Protein family/group databases | |
| CAZy | GH28. Glycoside Hydrolase Family 28. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Family and domain databases | |
| InterPro | IPR000743. Glyco_hydro_28. IPR006626. PbH1. IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view] |
| Gene3D | G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit. |
| Pfam | PF00295. Glyco_hydro_28. 1 hit. [Graphical view] |
| SMART | SM00710. PbH1. 5 hits. [Graphical view] |
| SUPFAM | SSF51126. Pectin_lyas_like. 1 hit. |
| PROSITE | PS00502. POLYGALACTURONASE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | P87217_9ASCO | ||||||||
| Accession | Primary (citable) accession number: P87217 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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