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Unreviewed, UniProtKB/TrEMBL P87217 (P87217_9ASCO)

Last modified May 5, 2009. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Protopectinases SE3 EMBL BAA20427.1
Gene names
Name: PSE3 EMBL BAA20427.1
OrganismGeotrichum klebahnii EMBL BAA20427.1
Taxonomic identifier44065 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesDipodascaceaemitosporic DipodascaceaeGeotrichum

Protein attributes

Sequence length367 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 28 family. RuleBase RU000404V2

Sequences

Sequence LengthMass (Da)Tools
P87217-1 [UniParc].

Last modified July 1, 1997. Version 1.
Checksum: 2B81C66982470E3C

FASTA36737,968
        10         20         30         40         50         60 
MLFSKSAIFA MAALAVAAPT EGDLQARGSA CVFKDAKSAI AGKKSCSSIT LENIAVPAGQ 

        70         80         90        100        110        120 
TLDLTGLAKG TVVTFAGTTT FGYKEWAGPL ISVSGDSITV KQASGGKIDC GGSRWWDGKG 

       130        140        150        160        170        180 
SNSGGKQKPK FFYAHKLQNS NIQGLQVYNT PVQAFSILSD HLTLSNILVD NRAGDKAGGH 

       190        200        210        220        230        240 
NTDAFDVGTS TYITIDHATV YNQDDCLAIN SGDHITFQNG FCSGGHGLSI GSVGGRSLNT 

       250        260        270        280        290        300 
VSNVNILNSQ VVNSDNGVRI KTISGATGSV SGVKFQDITL SNIAKYGIDV QQDYRNGGPT 

       310        320        330        340        350        360 
GNPTNGVKIT GIEFINIHGS VKSSGTNAYL LCGSGSCSNW TWSKINVKGG KDSGACKNVP 


SGATCKL 

« Hide

References

[1]"Cloning of a protopectinase gene of Trichosporon penicillatum and its expression in Saccharomyces cerevisiae."
Iguchi K., Hirano H., Kishida M., Kawasaki H., Sakai T.
Microbiology (Mosc.) 143:1657-1664(1997)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: B2 EMBL BAA20427.1.

Cross-references

Sequence databases

D89650 Genomic DNA. Translation: BAA20427.1.

3D structure databases

HSSPHSSP built from PDB template 1IB4 based on UniProtKB O74213.
ModBaseSearch...

Protein family/group databases

CAZyGH28. Glycoside Hydrolase Family 28.

Family and domain databases

InterProIPR000743. Glyco_hydro_28.
IPR006626. PbH1.
IPR012334. Pectin_lyas_fold.
[Graphical view]
Gene3DG3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
PfamPF00295. Glyco_hydro_28. 1 hit.
[Graphical view]
SMARTSM00710. PbH1. 5 hits.
[Graphical view]
PROSITEPS00502. POLYGALACTURONASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameP87217_9ASCO
AccessionPrimary (citable) accession number: P87217
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: May 5, 2009
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information