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P86496

- PR20A_HUMAN

UniProt

P86496 - PR20A_HUMAN

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Protein
Proline-rich protein 20A
Gene
PRR20A, PRR20
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Proline-rich protein 20A
Gene namesi
Name:PRR20A
Synonyms:PRR20
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 13

Organism-specific databases

HGNCiHGNC:24754. PRR20A.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA165505473.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 221221Proline-rich protein 20A
PRO_0000336092Add
BLAST

Proteomic databases

PRIDEiP86496.

Expressioni

Gene expression databases

BgeeiP86496.
GenevestigatoriQ8N7V5.

Structurei

3D structure databases

ProteinModelPortaliP86496.

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi22 – 7150Pro-rich
Add
BLAST
Compositional biasi59 – 9537Arg-rich
Add
BLAST

Phylogenomic databases

HOGENOMiHOG000115717.
OMAiSMAPNQA.
OrthoDBiEOG7N0C69.
PhylomeDBiP86496.
TreeFamiTF341860.

Sequencei

Sequence statusi: Complete.

P86496-1 [UniParc]FASTAAdd to Basket

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MEEPRPSKRL RSMAPNQASG GPPPEPGCCV ADPEGSVEAD GPAQPAQPAK    50
PIAYVKPFRR QPPARPESPP PAERGRRRGG SRRPGRGRGR RAGPRGDAGQ 100
RQGAEGLMAP DVHIQLDHHG EPGHQGEPEI TETAAFSLSE TGPPPGTVQE 150
GPGPDVAQPE LGFQEPPAAP GPQAVDWQPV LTLYPCIGFR ALGDSAVLQV 200
IQTPQGTYVQ GVPVFLTDIA Y 221
Length:221
Mass (Da):23,262
Last modified:April 20, 2010 - v1
Checksum:iE870312E6F1D607F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK097615 mRNA. No translation available.
AL353652 Genomic DNA. No translation available.
BC120931 mRNA. Translation: AAI20932.1.
BC120932 mRNA. Translation: AAI20933.1.
CCDSiCCDS31981.1.
RefSeqiNP_001123876.1. NM_001130404.1.
NP_001123877.1. NM_001130405.1.
NP_001123878.1. NM_001130406.1.
NP_001123879.1. NM_001130407.1.
NP_940843.1. NM_198441.2.
UniGeneiHs.525056.
Hs.723090.

Genome annotation databases

EnsembliENST00000377931; ENSP00000367164; ENSG00000204919.
GeneIDi122183.
729233.
729240.
729246.
729250.
KEGGihsa:122183.
hsa:729233.
hsa:729240.
hsa:729246.
hsa:729250.
UCSCiuc010thd.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AK097615 mRNA. No translation available.
AL353652 Genomic DNA. No translation available.
BC120931 mRNA. Translation: AAI20932.1 .
BC120932 mRNA. Translation: AAI20933.1 .
CCDSi CCDS31981.1.
RefSeqi NP_001123876.1. NM_001130404.1.
NP_001123877.1. NM_001130405.1.
NP_001123878.1. NM_001130406.1.
NP_001123879.1. NM_001130407.1.
NP_940843.1. NM_198441.2.
UniGenei Hs.525056.
Hs.723090.

3D structure databases

ProteinModelPortali P86496.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi P86496.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000377931 ; ENSP00000367164 ; ENSG00000204919 .
GeneIDi 122183.
729233.
729240.
729246.
729250.
KEGGi hsa:122183.
hsa:729233.
hsa:729240.
hsa:729246.
hsa:729250.
UCSCi uc010thd.1. human.

Organism-specific databases

CTDi 122183.
729233.
729240.
729246.
729250.
GeneCardsi GC13P057716.
HGNCi HGNC:24754. PRR20A.
neXtProti NX_P86496.
PharmGKBi PA165505473.
GenAtlasi Search...

Phylogenomic databases

HOGENOMi HOG000115717.
OMAi SMAPNQA.
OrthoDBi EOG7N0C69.
PhylomeDBi P86496.
TreeFami TF341860.

Miscellaneous databases

NextBioi 80862.
PROi P86496.

Gene expression databases

Bgeei P86496.
Genevestigatori Q8N7V5.

Family and domain databases

ProtoNeti Search...

Publicationsi

  1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
    Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
    , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
    Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Testis.
  2. "The DNA sequence and analysis of human chromosome 13."
    Dunham A., Matthews L.H., Burton J., Ashurst J.L., Howe K.L., Ashcroft K.J., Beare D.M., Burford D.C., Hunt S.E., Griffiths-Jones S., Jones M.C., Keenan S.J., Oliver K., Scott C.E., Ainscough R., Almeida J.P., Ambrose K.D., Andrews D.T.
    , Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Bannerjee R., Barlow K.F., Bates K., Beasley H., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burrill W., Carder C., Carter N.P., Chapman J.C., Clamp M.E., Clark S.Y., Clarke G., Clee C.M., Clegg S.C., Cobley V., Collins J.E., Corby N., Coville G.J., Deloukas P., Dhami P., Dunham I., Dunn M., Earthrowl M.E., Ellington A.G., Faulkner L., Frankish A.G., Frankland J., French L., Garner P., Garnett J., Gilbert J.G.R., Gilson C.J., Ghori J., Grafham D.V., Gribble S.M., Griffiths C., Hall R.E., Hammond S., Harley J.L., Hart E.A., Heath P.D., Howden P.J., Huckle E.J., Hunt P.J., Hunt A.R., Johnson C., Johnson D., Kay M., Kimberley A.M., King A., Laird G.K., Langford C.J., Lawlor S., Leongamornlert D.A., Lloyd D.M., Lloyd C., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., McLaren S.J., McMurray A., Milne S., Moore M.J.F., Nickerson T., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K.M., Rice C.M., Searle S., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Steward C.A., Sycamore N., Tester J., Thomas D.W., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Wilming L., Wray P.W., Wright M.W., Young L., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Beck S., Bentley D.R., Rogers J., Ross M.T.
    Nature 428:522-528(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].

Entry informationi

Entry nameiPR20A_HUMAN
AccessioniPrimary (citable) accession number: P86496
Secondary accession number(s): Q8N7V5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 20, 2010
Last sequence update: April 20, 2010
Last modified: July 9, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 13
    Human chromosome 13: entries, gene names and cross-references to MIM

External Data

Dasty 3

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