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P86496

- PR20A_HUMAN

UniProt

P86496 - PR20A_HUMAN

Protein

Proline-rich protein 20A

Gene

PRR20A

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 31 (09 Jul 2014)
      Sequence version 1 (20 Apr 2010)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Proline-rich protein 20A
    Gene namesi
    Name:PRR20A
    Synonyms:PRR20
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 13

    Organism-specific databases

    HGNCiHGNC:24754. PRR20A.

    Pathology & Biotechi

    Organism-specific databases

    PharmGKBiPA165505473.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 221221Proline-rich protein 20APRO_0000336092Add
    BLAST

    Proteomic databases

    PRIDEiP86496.

    Expressioni

    Gene expression databases

    BgeeiP86496.
    GenevestigatoriQ8N7V5.

    Structurei

    3D structure databases

    ProteinModelPortaliP86496.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi22 – 7150Pro-richAdd
    BLAST
    Compositional biasi59 – 9537Arg-richAdd
    BLAST

    Phylogenomic databases

    HOGENOMiHOG000115717.
    OMAiSMAPNQA.
    OrthoDBiEOG7N0C69.
    PhylomeDBiP86496.
    TreeFamiTF341860.

    Sequencei

    Sequence statusi: Complete.

    P86496-1 [UniParc]FASTAAdd to Basket

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    MEEPRPSKRL RSMAPNQASG GPPPEPGCCV ADPEGSVEAD GPAQPAQPAK    50
    PIAYVKPFRR QPPARPESPP PAERGRRRGG SRRPGRGRGR RAGPRGDAGQ 100
    RQGAEGLMAP DVHIQLDHHG EPGHQGEPEI TETAAFSLSE TGPPPGTVQE 150
    GPGPDVAQPE LGFQEPPAAP GPQAVDWQPV LTLYPCIGFR ALGDSAVLQV 200
    IQTPQGTYVQ GVPVFLTDIA Y 221
    Length:221
    Mass (Da):23,262
    Last modified:April 20, 2010 - v1
    Checksum:iE870312E6F1D607F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK097615 mRNA. No translation available.
    AL353652 Genomic DNA. No translation available.
    BC120931 mRNA. Translation: AAI20932.1.
    BC120932 mRNA. Translation: AAI20933.1.
    CCDSiCCDS31981.1.
    RefSeqiNP_001123876.1. NM_001130404.1.
    NP_001123877.1. NM_001130405.1.
    NP_001123878.1. NM_001130406.1.
    NP_001123879.1. NM_001130407.1.
    NP_940843.1. NM_198441.2.
    UniGeneiHs.525056.
    Hs.723090.

    Genome annotation databases

    EnsembliENST00000377931; ENSP00000367164; ENSG00000204919.
    GeneIDi122183.
    729233.
    729240.
    729246.
    729250.
    KEGGihsa:122183.
    hsa:729233.
    hsa:729240.
    hsa:729246.
    hsa:729250.
    UCSCiuc010thd.1. human.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK097615 mRNA. No translation available.
    AL353652 Genomic DNA. No translation available.
    BC120931 mRNA. Translation: AAI20932.1 .
    BC120932 mRNA. Translation: AAI20933.1 .
    CCDSi CCDS31981.1.
    RefSeqi NP_001123876.1. NM_001130404.1.
    NP_001123877.1. NM_001130405.1.
    NP_001123878.1. NM_001130406.1.
    NP_001123879.1. NM_001130407.1.
    NP_940843.1. NM_198441.2.
    UniGenei Hs.525056.
    Hs.723090.

    3D structure databases

    ProteinModelPortali P86496.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi P86496.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000377931 ; ENSP00000367164 ; ENSG00000204919 .
    GeneIDi 122183.
    729233.
    729240.
    729246.
    729250.
    KEGGi hsa:122183.
    hsa:729233.
    hsa:729240.
    hsa:729246.
    hsa:729250.
    UCSCi uc010thd.1. human.

    Organism-specific databases

    CTDi 122183.
    729233.
    729240.
    729246.
    729250.
    GeneCardsi GC13P057716.
    HGNCi HGNC:24754. PRR20A.
    neXtProti NX_P86496.
    PharmGKBi PA165505473.
    GenAtlasi Search...

    Phylogenomic databases

    HOGENOMi HOG000115717.
    OMAi SMAPNQA.
    OrthoDBi EOG7N0C69.
    PhylomeDBi P86496.
    TreeFami TF341860.

    Miscellaneous databases

    NextBioi 80862.
    PROi P86496.

    Gene expression databases

    Bgeei P86496.
    Genevestigatori Q8N7V5.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "Complete sequencing and characterization of 21,243 full-length human cDNAs."
      Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.
      , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
      Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Testis.
    2. "The DNA sequence and analysis of human chromosome 13."
      Dunham A., Matthews L.H., Burton J., Ashurst J.L., Howe K.L., Ashcroft K.J., Beare D.M., Burford D.C., Hunt S.E., Griffiths-Jones S., Jones M.C., Keenan S.J., Oliver K., Scott C.E., Ainscough R., Almeida J.P., Ambrose K.D., Andrews D.T.
      , Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Bannerjee R., Barlow K.F., Bates K., Beasley H., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burrill W., Carder C., Carter N.P., Chapman J.C., Clamp M.E., Clark S.Y., Clarke G., Clee C.M., Clegg S.C., Cobley V., Collins J.E., Corby N., Coville G.J., Deloukas P., Dhami P., Dunham I., Dunn M., Earthrowl M.E., Ellington A.G., Faulkner L., Frankish A.G., Frankland J., French L., Garner P., Garnett J., Gilbert J.G.R., Gilson C.J., Ghori J., Grafham D.V., Gribble S.M., Griffiths C., Hall R.E., Hammond S., Harley J.L., Hart E.A., Heath P.D., Howden P.J., Huckle E.J., Hunt P.J., Hunt A.R., Johnson C., Johnson D., Kay M., Kimberley A.M., King A., Laird G.K., Langford C.J., Lawlor S., Leongamornlert D.A., Lloyd D.M., Lloyd C., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., McLaren S.J., McMurray A., Milne S., Moore M.J.F., Nickerson T., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K.M., Rice C.M., Searle S., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Steward C.A., Sycamore N., Tester J., Thomas D.W., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Wilming L., Wray P.W., Wright M.W., Young L., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Beck S., Bentley D.R., Rogers J., Ross M.T.
      Nature 428:522-528(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].

    Entry informationi

    Entry nameiPR20A_HUMAN
    AccessioniPrimary (citable) accession number: P86496
    Secondary accession number(s): Q8N7V5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 20, 2010
    Last sequence update: April 20, 2010
    Last modified: July 9, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 13
      Human chromosome 13: entries, gene names and cross-references to MIM

    External Data

    Dasty 3