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Protein

Proline-rich protein 20B

Gene

PRR20B

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Proline-rich protein 20B
Gene namesi
Name:PRR20BImported
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 13

Organism-specific databases

HGNCiHGNC:37220. PRR20B.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA165505473.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 221221Proline-rich protein 20BPRO_0000393890Add
BLAST

Proteomic databases

PRIDEiP86481.

Expressioni

Gene expression databases

BgeeiP86481.

Interactioni

Protein-protein interaction databases

BioGridi125761. 25 interactions.

Structurei

3D structure databases

ProteinModelPortaliP86481.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi22 – 7150Pro-richSequence AnalysisAdd
BLAST
Compositional biasi59 – 9537Arg-richSequence AnalysisAdd
BLAST

Phylogenomic databases

InParanoidiP86481.
OrthoDBiEOG7N0C69.
PhylomeDBiP86481.
TreeFamiTF341860.

Sequencei

Sequence statusi: Complete.

P86481-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEEPRPSKRL RSMAPNQASG GPPPEPGCCV ADPEGSVEAD GPAQPAQPAK
60 70 80 90 100
PIAYVKPFRR QPPARPESPP PAERGRRRGG SRRPGRGRGR RAGPRGDAGQ
110 120 130 140 150
RQGAEGLMAP DVHIQLDHHG EPGHQGEPEI TETAAFSLSE TGPPPGTVQE
160 170 180 190 200
GPGPDVAQPE LGFQEPPAAP GPQAVDWQPV LTLYPCIGFR ALGDSAVLQV
210 220
IQTPQGTYVQ GVPVFLTDIA Y
Length:221
Mass (Da):23,262
Last modified:April 20, 2010 - v1
Checksum:iE870312E6F1D607F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL353652 Genomic DNA. No translation available.
CCDSiCCDS45053.1.
RefSeqiNP_001123876.1. NM_001130404.1.
NP_001123877.1. NM_001130405.1.
NP_001123878.1. NM_001130406.1.
NP_001123879.1. NM_001130407.1.
NP_940843.1. NM_198441.2.
UniGeneiHs.525056.
Hs.723090.

Genome annotation databases

EnsembliENST00000377930; ENSP00000367163; ENSG00000204918.
GeneIDi122183.
729233.
729240.
729246.
729250.
KEGGihsa:122183.
hsa:729233.
hsa:729240.
hsa:729246.
hsa:729250.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL353652 Genomic DNA. No translation available.
CCDSiCCDS45053.1.
RefSeqiNP_001123876.1. NM_001130404.1.
NP_001123877.1. NM_001130405.1.
NP_001123878.1. NM_001130406.1.
NP_001123879.1. NM_001130407.1.
NP_940843.1. NM_198441.2.
UniGeneiHs.525056.
Hs.723090.

3D structure databases

ProteinModelPortaliP86481.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi125761. 25 interactions.

Proteomic databases

PRIDEiP86481.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000377930; ENSP00000367163; ENSG00000204918.
GeneIDi122183.
729233.
729240.
729246.
729250.
KEGGihsa:122183.
hsa:729233.
hsa:729240.
hsa:729246.
hsa:729250.

Organism-specific databases

CTDi122183.
729233.
729240.
729246.
729250.
GeneCardsiGC13P057721.
HGNCiHGNC:37220. PRR20B.
neXtProtiNX_P86481.
PharmGKBiPA165505473.
GenAtlasiSearch...

Phylogenomic databases

InParanoidiP86481.
OrthoDBiEOG7N0C69.
PhylomeDBiP86481.
TreeFamiTF341860.

Miscellaneous databases

NextBioi80862.
PROiP86481.

Gene expression databases

BgeeiP86481.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "The DNA sequence and analysis of human chromosome 13."
    Dunham A., Matthews L.H., Burton J., Ashurst J.L., Howe K.L., Ashcroft K.J., Beare D.M., Burford D.C., Hunt S.E., Griffiths-Jones S., Jones M.C., Keenan S.J., Oliver K., Scott C.E., Ainscough R., Almeida J.P., Ambrose K.D., Andrews D.T.
    , Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Bannerjee R., Barlow K.F., Bates K., Beasley H., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burrill W., Carder C., Carter N.P., Chapman J.C., Clamp M.E., Clark S.Y., Clarke G., Clee C.M., Clegg S.C., Cobley V., Collins J.E., Corby N., Coville G.J., Deloukas P., Dhami P., Dunham I., Dunn M., Earthrowl M.E., Ellington A.G., Faulkner L., Frankish A.G., Frankland J., French L., Garner P., Garnett J., Gilbert J.G.R., Gilson C.J., Ghori J., Grafham D.V., Gribble S.M., Griffiths C., Hall R.E., Hammond S., Harley J.L., Hart E.A., Heath P.D., Howden P.J., Huckle E.J., Hunt P.J., Hunt A.R., Johnson C., Johnson D., Kay M., Kimberley A.M., King A., Laird G.K., Langford C.J., Lawlor S., Leongamornlert D.A., Lloyd D.M., Lloyd C., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., McLaren S.J., McMurray A., Milne S., Moore M.J.F., Nickerson T., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K.M., Rice C.M., Searle S., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Steward C.A., Sycamore N., Tester J., Thomas D.W., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Wilming L., Wray P.W., Wright M.W., Young L., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Beck S., Bentley D.R., Rogers J., Ross M.T.
    Nature 428:522-528(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiPR20B_HUMAN
AccessioniPrimary (citable) accession number: P86481
Secondary accession number(s): Q8N7V5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 20, 2010
Last sequence update: April 20, 2010
Last modified: February 4, 2015
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 13
    Human chromosome 13: entries, gene names and cross-references to MIM

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.