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Protein

Proline-rich protein 20C

Gene

PRR20C

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciZFISH:G66-32138-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Proline-rich protein 20C
Gene namesi
Name:PRR20CImported
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 13

Organism-specific databases

HGNCiHGNC:37221. PRR20C.

Pathology & Biotechi

Organism-specific databases

DisGeNETi122183.
OpenTargetsiENSG00000204918.
ENSG00000204919.
ENSG00000227151.
ENSG00000229665.
ENSG00000234278.
PharmGKBiPA165505473.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003938921 – 221Proline-rich protein 20CAdd BLAST221

Proteomic databases

PaxDbiP86479.
PRIDEiP86479.

PTM databases

iPTMnetiP86479.
PhosphoSitePlusiP86479.

Expressioni

Gene expression databases

GenevisibleiP86479. HS.

Organism-specific databases

HPAiHPA059485.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
itself3EBI-10172814,EBI-10172814
ATXN1P542535EBI-10172814,EBI-930964
C1orf94Q6P1W55EBI-10172814,EBI-946029
DAB1O755533EBI-10172814,EBI-7875264
DAZAP2Q150386EBI-10172814,EBI-724310
FAM168AQ925673EBI-10172814,EBI-7957930
FOXP3Q9BZS16EBI-10172814,EBI-983719
GATA2P237693EBI-10172814,EBI-2806671
NAA38Q9BRA03EBI-10172814,EBI-9106509
NCK2O436395EBI-10172814,EBI-713635
NEDD9Q145113EBI-10172814,EBI-2108053
POGZQ7Z3K35EBI-10172814,EBI-1389308
POU2F1P14859-64EBI-10172814,EBI-11526590
RBPMSQ930623EBI-10172814,EBI-740322
RBPMS2Q6ZRY44EBI-10172814,EBI-11987469
ROR2A1L4F53EBI-10172814,EBI-10172778
ROR2Q019744EBI-10172814,EBI-6422642
SELVP597973EBI-10172814,EBI-10216195
SIAH1Q8IUQ45EBI-10172814,EBI-747107
SOX5P357113EBI-10172814,EBI-3505701
SP4Q024467EBI-10172814,EBI-10198587
TFGQ927344EBI-10172814,EBI-357061
THAP1Q9NVV95EBI-10172814,EBI-741515
TOLLIPQ6FIE93EBI-10172814,EBI-10249783
VAC14Q08AM65EBI-10172814,EBI-2107455
ZC3H10Q96K805EBI-10172814,EBI-742550
ZNF488Q96MN93EBI-10172814,EBI-948288

Protein-protein interaction databases

BioGridi125761. 25 interactors.
609653. 15 interactors.
IntActiP86479. 74 interactors.

Structurei

3D structure databases

ProteinModelPortaliP86479.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi22 – 71Pro-richSequence analysisAdd BLAST50
Compositional biasi59 – 95Arg-richSequence analysisAdd BLAST37

Phylogenomic databases

eggNOGiENOG410KFWV. Eukaryota.
ENOG4110SX1. LUCA.
InParanoidiP86479.
OrthoDBiEOG091G0S87.
PhylomeDBiP86479.
TreeFamiTF341860.

Family and domain databases

InterProiIPR031439. PRR20.
[Graphical view]
PfamiPF15708. PRR20. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P86479-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEEPRPSKRL RSMAPNQASG GPPPEPGCCV ADPEGSVEAD GPAQPAQPAK
60 70 80 90 100
PIAYVKPFRR QPPARPESPP PAERGRRRGG SRRPGRGRGR RAGPRGDAGQ
110 120 130 140 150
RQGAEGLMAP DVHIQLDHHG EPGHQGEPEI TETAAFSLSE TGPPPGTVQE
160 170 180 190 200
GPGPDVAQPE LGFQEPPAAP GPQAVDWQPV LTLYPCIGFR ALGDSAVLQV
210 220
IQTPQGTYVQ GVPVFLTDIA Y
Length:221
Mass (Da):23,262
Last modified:April 20, 2010 - v1
Checksum:iE870312E6F1D607F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL353652 Genomic DNA. No translation available.
CCDSiCCDS45054.1.
RefSeqiNP_001123876.1. NM_001130404.1.
NP_001123877.1. NM_001130405.1.
NP_001123878.1. NM_001130406.1.
NP_001123879.1. NM_001130407.1.
NP_940843.1. NM_198441.2.
XP_016855016.1. XM_016999527.1.
UniGeneiHs.525056.
Hs.723090.

Genome annotation databases

EnsembliENST00000544357; ENSP00000438757; ENSG00000229665.
ENST00000614894; ENSP00000480729; ENSG00000229665.
GeneIDi105370298.
122183.
729233.
729240.
729246.
729250.
KEGGihsa:122183.
hsa:729233.
hsa:729240.
hsa:729246.
hsa:729250.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL353652 Genomic DNA. No translation available.
CCDSiCCDS45054.1.
RefSeqiNP_001123876.1. NM_001130404.1.
NP_001123877.1. NM_001130405.1.
NP_001123878.1. NM_001130406.1.
NP_001123879.1. NM_001130407.1.
NP_940843.1. NM_198441.2.
XP_016855016.1. XM_016999527.1.
UniGeneiHs.525056.
Hs.723090.

3D structure databases

ProteinModelPortaliP86479.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi125761. 25 interactors.
609653. 15 interactors.
IntActiP86479. 74 interactors.

PTM databases

iPTMnetiP86479.
PhosphoSitePlusiP86479.

Proteomic databases

PaxDbiP86479.
PRIDEiP86479.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000544357; ENSP00000438757; ENSG00000229665.
ENST00000614894; ENSP00000480729; ENSG00000229665.
GeneIDi105370298.
122183.
729233.
729240.
729246.
729250.
KEGGihsa:122183.
hsa:729233.
hsa:729240.
hsa:729246.
hsa:729250.

Organism-specific databases

CTDi122183.
729233.
729240.
729246.
729250.
DisGeNETi122183.
GeneCardsiPRR20C.
HGNCiHGNC:37221. PRR20C.
HPAiHPA059485.
neXtProtiNX_P86479.
OpenTargetsiENSG00000204918.
ENSG00000204919.
ENSG00000227151.
ENSG00000229665.
ENSG00000234278.
PharmGKBiPA165505473.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410KFWV. Eukaryota.
ENOG4110SX1. LUCA.
InParanoidiP86479.
OrthoDBiEOG091G0S87.
PhylomeDBiP86479.
TreeFamiTF341860.

Enzyme and pathway databases

BioCyciZFISH:G66-32138-MONOMER.

Miscellaneous databases

PROiP86479.

Gene expression databases

GenevisibleiP86479. HS.

Family and domain databases

InterProiIPR031439. PRR20.
[Graphical view]
PfamiPF15708. PRR20. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiPR20C_HUMAN
AccessioniPrimary (citable) accession number: P86479
Secondary accession number(s): Q8N7V5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 30, 2016
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 13
    Human chromosome 13: entries, gene names and cross-references to MIM

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.