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P86479

- PR20C_HUMAN

UniProt

P86479 - PR20C_HUMAN

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Protein

Proline-rich protein 20C

Gene
PRR20C
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5 - Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Proline-rich protein 20C
Gene namesi
Name:PRR20C
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 13

Organism-specific databases

HGNCiHGNC:37221. PRR20C.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA165505473.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 221221Proline-rich protein 20CPRO_0000393892Add
BLAST

Proteomic databases

PRIDEiP86479.

Expressioni

Gene expression databases

BgeeiP86479.

Structurei

3D structure databases

ProteinModelPortaliP86479.

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi22 – 7150Pro-richAdd
BLAST
Compositional biasi59 – 9537Arg-richAdd
BLAST

Phylogenomic databases

OrthoDBiEOG7N0C69.
PhylomeDBiP86479.
TreeFamiTF341860.

Sequencei

Sequence statusi: Complete.

P86479-1 [UniParc]FASTAAdd to Basket

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MEEPRPSKRL RSMAPNQASG GPPPEPGCCV ADPEGSVEAD GPAQPAQPAK    50
PIAYVKPFRR QPPARPESPP PAERGRRRGG SRRPGRGRGR RAGPRGDAGQ 100
RQGAEGLMAP DVHIQLDHHG EPGHQGEPEI TETAAFSLSE TGPPPGTVQE 150
GPGPDVAQPE LGFQEPPAAP GPQAVDWQPV LTLYPCIGFR ALGDSAVLQV 200
IQTPQGTYVQ GVPVFLTDIA Y 221
Length:221
Mass (Da):23,262
Last modified:April 20, 2010 - v1
Checksum:iE870312E6F1D607F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL353652 Genomic DNA. No translation available.
CCDSiCCDS45054.1.
RefSeqiNP_001123876.1. NM_001130404.1.
NP_001123877.1. NM_001130405.1.
NP_001123878.1. NM_001130406.1.
NP_001123879.1. NM_001130407.1.
NP_940843.1. NM_198441.2.
UniGeneiHs.525056.
Hs.723090.

Genome annotation databases

EnsembliENST00000544357; ENSP00000438757; ENSG00000229665.
GeneIDi122183.
729233.
729240.
729246.
729250.
KEGGihsa:122183.
hsa:729233.
hsa:729240.
hsa:729246.
hsa:729250.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL353652 Genomic DNA. No translation available.
CCDSi CCDS45054.1.
RefSeqi NP_001123876.1. NM_001130404.1.
NP_001123877.1. NM_001130405.1.
NP_001123878.1. NM_001130406.1.
NP_001123879.1. NM_001130407.1.
NP_940843.1. NM_198441.2.
UniGenei Hs.525056.
Hs.723090.

3D structure databases

ProteinModelPortali P86479.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi P86479.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000544357 ; ENSP00000438757 ; ENSG00000229665 .
GeneIDi 122183.
729233.
729240.
729246.
729250.
KEGGi hsa:122183.
hsa:729233.
hsa:729240.
hsa:729246.
hsa:729250.

Organism-specific databases

CTDi 122183.
729233.
729240.
729246.
729250.
GeneCardsi GC13P057728.
HGNCi HGNC:37221. PRR20C.
neXtProti NX_P86479.
PharmGKBi PA165505473.
GenAtlasi Search...

Phylogenomic databases

OrthoDBi EOG7N0C69.
PhylomeDBi P86479.
TreeFami TF341860.

Miscellaneous databases

NextBioi 80862.
PROi P86479.

Gene expression databases

Bgeei P86479.

Family and domain databases

ProtoNeti Search...

Publicationsi

  1. "The DNA sequence and analysis of human chromosome 13."
    Dunham A., Matthews L.H., Burton J., Ashurst J.L., Howe K.L., Ashcroft K.J., Beare D.M., Burford D.C., Hunt S.E., Griffiths-Jones S., Jones M.C., Keenan S.J., Oliver K., Scott C.E., Ainscough R., Almeida J.P., Ambrose K.D., Andrews D.T.
    , Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Bannerjee R., Barlow K.F., Bates K., Beasley H., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burrill W., Carder C., Carter N.P., Chapman J.C., Clamp M.E., Clark S.Y., Clarke G., Clee C.M., Clegg S.C., Cobley V., Collins J.E., Corby N., Coville G.J., Deloukas P., Dhami P., Dunham I., Dunn M., Earthrowl M.E., Ellington A.G., Faulkner L., Frankish A.G., Frankland J., French L., Garner P., Garnett J., Gilbert J.G.R., Gilson C.J., Ghori J., Grafham D.V., Gribble S.M., Griffiths C., Hall R.E., Hammond S., Harley J.L., Hart E.A., Heath P.D., Howden P.J., Huckle E.J., Hunt P.J., Hunt A.R., Johnson C., Johnson D., Kay M., Kimberley A.M., King A., Laird G.K., Langford C.J., Lawlor S., Leongamornlert D.A., Lloyd D.M., Lloyd C., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., McLaren S.J., McMurray A., Milne S., Moore M.J.F., Nickerson T., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., Phillimore B., Porter K.M., Rice C.M., Searle S., Sehra H.K., Shownkeen R., Skuce C.D., Smith M., Steward C.A., Sycamore N., Tester J., Thomas D.W., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Wilming L., Wray P.W., Wright M.W., Young L., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Beck S., Bentley D.R., Rogers J., Ross M.T.
    Nature 428:522-528(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiPR20C_HUMAN
AccessioniPrimary (citable) accession number: P86479
Secondary accession number(s): Q8N7V5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 20, 2010
Last sequence update: April 20, 2010
Last modified: July 9, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 13
    Human chromosome 13: entries, gene names and cross-references to MIM

External Data

Dasty 3

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