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Protein

60S ribosomal protein L10-like

Gene

Rpl10l

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. spermatogenesis Source: Ensembl
  2. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L10-like
Gene namesi
Name:Rpl10lImported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589 Componenti: Chromosome 12

Organism-specific databases

MGIiMGI:3647985. Rpl10l.

Subcellular locationi

GO - Cellular componenti

  1. cytosolic large ribosomal subunit Source: MGI
  2. membrane Source: MGI
  3. nucleus Source: MGI
  4. polysome Source: MGI
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 21421460S ribosomal protein L10-likePRO_0000354975Add
BLAST

Proteomic databases

PaxDbiP86048.
PRIDEiP86048.

PTM databases

PhosphoSiteiP86048.

Expressioni

Gene expression databases

BgeeiP86048.
GenevestigatoriP86048.

Structurei

3D structure databases

ProteinModelPortaliP86048.
SMRiP86048. Positions 2-214.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L10e family.Sequence Analysis

Phylogenomic databases

eggNOGiCOG0197.
GeneTreeiENSGT00390000003897.
HOGENOMiHOG000223754.
HOVERGENiHBG002287.
InParanoidiP86048.
OMAiCKESNAK.
OrthoDBiEOG76MK97.
PhylomeDBiP86048.
TreeFamiTF300082.

Family and domain databases

Gene3Di3.90.1170.10. 1 hit.
InterProiIPR001197. Ribosomal_L10e.
IPR016180. Ribosomal_L10e/L16.
IPR018255. Ribosomal_L10e_CS.
[Graphical view]
PfamiPF00252. Ribosomal_L16. 1 hit.
[Graphical view]
PIRSFiPIRSF005590. Ribosomal_L10. 1 hit.
SUPFAMiSSF54686. SSF54686. 1 hit.
TIGRFAMsiTIGR00279. uL16_euk_arch. 1 hit.
PROSITEiPS01257. RIBOSOMAL_L10E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P86048-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRRPARCYR YCKNKPYPKS RFCRGVPDAK IRIFDLGRKK AKVDEFPLCG
60 70 80 90 100
HMVSDEYEQL SSEALEAARI CANKYMVKSC GKDGFHIRVR LHPFHVIRIN
110 120 130 140 150
KMLSCAGADR LQTGMRGAFG KPQGTVARVH IGQVIMSIRT KLQNKEHVIE
160 170 180 190 200
ALRRAKFKFP GRQKIHISKK WGFTKFNADE FEDKVAAKRL IPDGCGVKYI
210
PERGPLDKWR ALHS
Length:214
Mass (Da):24,558
Last modified:November 25, 2008 - v1
Checksum:i57C0CEC8D87C729E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC125344 Genomic DNA. No translation available.
BC052145 mRNA. No translation available.
CCDSiCCDS49076.1.
RefSeqiNP_001156405.1. NM_001162933.1.
UniGeneiMm.188575.

Genome annotation databases

EnsembliENSMUST00000081908; ENSMUSP00000100795; ENSMUSG00000060499.
GeneIDi238217.
KEGGimmu:238217.
UCSCiuc011ymh.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC125344 Genomic DNA. No translation available.
BC052145 mRNA. No translation available.
CCDSiCCDS49076.1.
RefSeqiNP_001156405.1. NM_001162933.1.
UniGeneiMm.188575.

3D structure databases

ProteinModelPortaliP86048.
SMRiP86048. Positions 2-214.
ModBaseiSearch...
MobiDBiSearch...

PTM databases

PhosphoSiteiP86048.

Proteomic databases

PaxDbiP86048.
PRIDEiP86048.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000081908; ENSMUSP00000100795; ENSMUSG00000060499.
GeneIDi238217.
KEGGimmu:238217.
UCSCiuc011ymh.1. mouse.

Organism-specific databases

CTDi140801.
MGIiMGI:3647985. Rpl10l.

Phylogenomic databases

eggNOGiCOG0197.
GeneTreeiENSGT00390000003897.
HOGENOMiHOG000223754.
HOVERGENiHBG002287.
InParanoidiP86048.
OMAiCKESNAK.
OrthoDBiEOG76MK97.
PhylomeDBiP86048.
TreeFamiTF300082.

Miscellaneous databases

NextBioi383691.
PROiP86048.
SOURCEiSearch...

Gene expression databases

BgeeiP86048.
GenevestigatoriP86048.

Family and domain databases

Gene3Di3.90.1170.10. 1 hit.
InterProiIPR001197. Ribosomal_L10e.
IPR016180. Ribosomal_L10e/L16.
IPR018255. Ribosomal_L10e_CS.
[Graphical view]
PfamiPF00252. Ribosomal_L16. 1 hit.
[Graphical view]
PIRSFiPIRSF005590. Ribosomal_L10. 1 hit.
SUPFAMiSSF54686. SSF54686. 1 hit.
TIGRFAMsiTIGR00279. uL16_euk_arch. 1 hit.
PROSITEiPS01257. RIBOSOMAL_L10E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6J.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Testis1 Publication.

Entry informationi

Entry nameiRL10L_MOUSE
AccessioniPrimary (citable) accession number: P86048
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 25, 2008
Last sequence update: November 25, 2008
Last modified: April 29, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.