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P86048

- RL10L_MOUSE

UniProt

P86048 - RL10L_MOUSE

Protein

60S ribosomal protein L10-like

Gene

Rpl10l

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 43 (01 Oct 2014)
      Sequence version 1 (25 Nov 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. spermatogenesis Source: Ensembl
    2. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    60S ribosomal protein L10-like
    Gene namesi
    Name:Rpl10lImported
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 12

    Organism-specific databases

    MGIiMGI:3647985. Rpl10l.

    Subcellular locationi

    GO - Cellular componenti

    1. cytosolic large ribosomal subunit Source: MGI
    2. nucleus Source: Ensembl
    3. polysome Source: MGI

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 21421460S ribosomal protein L10-likePRO_0000354975Add
    BLAST

    Proteomic databases

    PaxDbiP86048.
    PRIDEiP86048.

    PTM databases

    PhosphoSiteiP86048.

    Expressioni

    Gene expression databases

    BgeeiP86048.
    GenevestigatoriP86048.

    Structurei

    3D structure databases

    ProteinModelPortaliP86048.
    SMRiP86048. Positions 2-214.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L10e family.Sequence Analysis

    Phylogenomic databases

    eggNOGiCOG0197.
    GeneTreeiENSGT00390000003897.
    HOGENOMiHOG000223754.
    HOVERGENiHBG002287.
    OMAiIRCKDSN.
    OrthoDBiEOG76MK97.
    PhylomeDBiP86048.
    TreeFamiTF300082.

    Family and domain databases

    Gene3Di3.90.1170.10. 1 hit.
    InterProiIPR001197. Ribosomal_L10e.
    IPR016180. Ribosomal_L10e/L16.
    IPR018255. Ribosomal_L10e_CS.
    [Graphical view]
    PfamiPF00252. Ribosomal_L16. 1 hit.
    [Graphical view]
    PIRSFiPIRSF005590. Ribosomal_L10. 1 hit.
    SUPFAMiSSF54686. SSF54686. 1 hit.
    TIGRFAMsiTIGR00279. L10e. 1 hit.
    PROSITEiPS01257. RIBOSOMAL_L10E. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P86048-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGRRPARCYR YCKNKPYPKS RFCRGVPDAK IRIFDLGRKK AKVDEFPLCG    50
    HMVSDEYEQL SSEALEAARI CANKYMVKSC GKDGFHIRVR LHPFHVIRIN 100
    KMLSCAGADR LQTGMRGAFG KPQGTVARVH IGQVIMSIRT KLQNKEHVIE 150
    ALRRAKFKFP GRQKIHISKK WGFTKFNADE FEDKVAAKRL IPDGCGVKYI 200
    PERGPLDKWR ALHS 214
    Length:214
    Mass (Da):24,558
    Last modified:November 25, 2008 - v1
    Checksum:i57C0CEC8D87C729E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC125344 Genomic DNA. No translation available.
    BC052145 mRNA. No translation available.
    CCDSiCCDS49076.1.
    RefSeqiNP_001156405.1. NM_001162933.1.
    UniGeneiMm.188575.

    Genome annotation databases

    EnsembliENSMUST00000081908; ENSMUSP00000100795; ENSMUSG00000060499.
    GeneIDi238217.
    KEGGimmu:238217.
    UCSCiuc011ymh.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC125344 Genomic DNA. No translation available.
    BC052145 mRNA. No translation available.
    CCDSi CCDS49076.1.
    RefSeqi NP_001156405.1. NM_001162933.1.
    UniGenei Mm.188575.

    3D structure databases

    ProteinModelPortali P86048.
    SMRi P86048. Positions 2-214.
    ModBasei Search...
    MobiDBi Search...

    PTM databases

    PhosphoSitei P86048.

    Proteomic databases

    PaxDbi P86048.
    PRIDEi P86048.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000081908 ; ENSMUSP00000100795 ; ENSMUSG00000060499 .
    GeneIDi 238217.
    KEGGi mmu:238217.
    UCSCi uc011ymh.1. mouse.

    Organism-specific databases

    CTDi 140801.
    MGIi MGI:3647985. Rpl10l.

    Phylogenomic databases

    eggNOGi COG0197.
    GeneTreei ENSGT00390000003897.
    HOGENOMi HOG000223754.
    HOVERGENi HBG002287.
    OMAi IRCKDSN.
    OrthoDBi EOG76MK97.
    PhylomeDBi P86048.
    TreeFami TF300082.

    Miscellaneous databases

    NextBioi 383691.
    PROi P86048.
    SOURCEi Search...

    Gene expression databases

    Bgeei P86048.
    Genevestigatori P86048.

    Family and domain databases

    Gene3Di 3.90.1170.10. 1 hit.
    InterProi IPR001197. Ribosomal_L10e.
    IPR016180. Ribosomal_L10e/L16.
    IPR018255. Ribosomal_L10e_CS.
    [Graphical view ]
    Pfami PF00252. Ribosomal_L16. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF005590. Ribosomal_L10. 1 hit.
    SUPFAMi SSF54686. SSF54686. 1 hit.
    TIGRFAMsi TIGR00279. L10e. 1 hit.
    PROSITEi PS01257. RIBOSOMAL_L10E. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6J.
    2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Testis1 Publication.

    Entry informationi

    Entry nameiRL10L_MOUSE
    AccessioniPrimary (citable) accession number: P86048
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 25, 2008
    Last sequence update: November 25, 2008
    Last modified: October 1, 2014
    This is version 43 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. MGD cross-references
      Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3