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P84254

- NCAP_WYHV

UniProt

P84254 - NCAP_WYHV

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Protein
Nucleoprotein
Gene
pc3
Organism
Wheat yellow head virus (WYHV)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at protein leveli

Functioni

Encapsidates the genome, protecting it from nucleases. The encapsidated genomic RNA is termed the nucleocapsid (NC), and serves as template for viral transcription and replication By similarity.

GO - Molecular functioni

  1. RNA binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

RNA-binding, Viral nucleoprotein

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleoprotein
Alternative name(s):
Coat protein
Short name:
CP
Nucleocapsid protein
Short name:
Protein N
Protein pc3
Gene namesi
ORF Names:pc3
OrganismiWheat yellow head virus (WYHV)
Taxonomic identifieri299385 [NCBI]
Taxonomic lineageiVirusesssRNA negative-strand virusesTenuivirus
Virus hostiTriticum aestivum (Wheat) [TaxID: 4565]

Subcellular locationi

Virion. Host cytoplasm By similarity

GO - Cellular componenti

  1. helical viral capsid Source: UniProtKB-KW
  2. host cell cytoplasm Source: UniProtKB-SubCell
  3. viral nucleocapsid Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Capsid protein, Helical capsid protein, Host cytoplasm, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 314314Nucleoprotein
PRO_0000222523Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei1 – 11N-acetylmethionine; by host Reviewed prediction1 Publication

Keywords - PTMi

Acetylation

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni198 – 314117RNA-binding By similarity
Add
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi203 – 2064Poly-Lys

Sequence similaritiesi

Family and domain databases

InterProiIPR009522. Capsid_Phlebovir/Tenuivir.
IPR008864. Nucleocapsid_Tenuivirus.
[Graphical view]
PfamiPF05733. Tenui_N. 1 hit.
[Graphical view]
PIRSFiPIRSF004108. Tenuivirus_N. 1 hit.

Sequencei

Sequence statusi: Complete.

P84254-1 [UniParc]FASTAAdd to Basket

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MTSMVEIQNE IERVTALAVK YISENKDSLV VFVGQIDYNG YDAGKLLSIL    50
KEKAKGRDFG RDLCYLLVMR YTRGTGFVRD VRKKIKVAAG ADTAYEIVTH 100
YGVVQSVGDN ADAITLGRLA ALFPYVSMNI VKSVSTGAKL ALDTSDLGTS 150
GLDILLWDFV PQFINLDSVD APYCNKKNTS NILFSLHLLQ GALTTRKTMP 200
DQKKKKDNLT TDFDLLKYTA ELLVITCSAK NLTDNKKSTY RKKLVEPFRE 250
NEDYKADFWT ALGKLSTGCL KKMKKDAQNY LKDRTTVLKL MVDNCSGTDD 300
EAAKAIKDYL TVDD 314
Length:314
Mass (Da):35,046
Last modified:December 7, 2004 - v1
Checksum:i9D4EC09929E30B59
GO

Cross-referencesi

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

InterProi IPR009522. Capsid_Phlebovir/Tenuivir.
IPR008864. Nucleocapsid_Tenuivirus.
[Graphical view ]
Pfami PF05733. Tenui_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF004108. Tenuivirus_N. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Association of a virus with wheat displaying yellow head disease symptoms in the Great Plains."
    Seifers D.L., Harvey T.L., Martin T.J., Haber S., She Y.-M., Ens W., Standing K.G., Salomon R., Gera A.
    Plant Dis. 89:888-895(2005)
    [AGRICOLA] [Europe PMC]
    Cited for: PROTEIN SEQUENCE, ACETYLATION AT MET-1.

Entry informationi

Entry nameiNCAP_WYHV
AccessioniPrimary (citable) accession number: P84254
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 7, 2004
Last sequence update: December 7, 2004
Last modified: October 16, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Caution

This protein is few amino acids shorter in its N-terminus than to all other tenuiviruses. It has been described as N-acetylated unlike all other negative stranded virus nucleoproteins. Since no genome sequence is available for this virus, the N-acetylmethionine may be an artifact of protein sequencing.

Keywords - Technical termi

Direct protein sequencing

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi