Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

P84254

- NCAP_WYHV

UniProt

P84254 - NCAP_WYHV

Protein

Nucleoprotein

Gene

pc3

Organism
Wheat yellow head virus (WYHV)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 29 (01 Oct 2014)
      Sequence version 1 (07 Dec 2004)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Encapsidates the genome, protecting it from nucleases. The encapsidated genomic RNA is termed the nucleocapsid (NC), and serves as template for viral transcription and replication By similarity.By similarity

    GO - Molecular functioni

    1. RNA binding Source: UniProtKB-KW

    Keywords - Ligandi

    RNA-binding, Viral nucleoprotein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Nucleoprotein
    Alternative name(s):
    Coat protein
    Short name:
    CP
    Nucleocapsid protein
    Short name:
    Protein N
    Protein pc3
    Gene namesi
    ORF Names:pc3
    OrganismiWheat yellow head virus (WYHV)
    Taxonomic identifieri299385 [NCBI]
    Taxonomic lineageiVirusesssRNA negative-strand virusesTenuivirus
    Virus hostiTriticum aestivum (Wheat) [TaxID: 4565]

    Subcellular locationi

    Virion. Host cytoplasm By similarity

    GO - Cellular componenti

    1. helical viral capsid Source: UniProtKB-KW
    2. host cell cytoplasm Source: UniProtKB-SubCell
    3. viral nucleocapsid Source: UniProtKB-KW

    Keywords - Cellular componenti

    Capsid protein, Helical capsid protein, Host cytoplasm, Virion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 314314NucleoproteinPRO_0000222523Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei1 – 11N-acetylmethionine; by hostSequence Analysis

    Keywords - PTMi

    Acetylation

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni198 – 314117RNA-bindingBy similarityAdd
    BLAST

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi203 – 2064Poly-Lys

    Sequence similaritiesi

    Family and domain databases

    InterProiIPR009522. Capsid_Phlebovir/Tenuivir.
    IPR008864. Nucleocapsid_Tenuivirus.
    [Graphical view]
    PfamiPF05733. Tenui_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF004108. Tenuivirus_N. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P84254-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTSMVEIQNE IERVTALAVK YISENKDSLV VFVGQIDYNG YDAGKLLSIL    50
    KEKAKGRDFG RDLCYLLVMR YTRGTGFVRD VRKKIKVAAG ADTAYEIVTH 100
    YGVVQSVGDN ADAITLGRLA ALFPYVSMNI VKSVSTGAKL ALDTSDLGTS 150
    GLDILLWDFV PQFINLDSVD APYCNKKNTS NILFSLHLLQ GALTTRKTMP 200
    DQKKKKDNLT TDFDLLKYTA ELLVITCSAK NLTDNKKSTY RKKLVEPFRE 250
    NEDYKADFWT ALGKLSTGCL KKMKKDAQNY LKDRTTVLKL MVDNCSGTDD 300
    EAAKAIKDYL TVDD 314
    Length:314
    Mass (Da):35,046
    Last modified:December 7, 2004 - v1
    Checksum:i9D4EC09929E30B59
    GO

    Cross-referencesi

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    InterProi IPR009522. Capsid_Phlebovir/Tenuivir.
    IPR008864. Nucleocapsid_Tenuivirus.
    [Graphical view ]
    Pfami PF05733. Tenui_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF004108. Tenuivirus_N. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Association of a virus with wheat displaying yellow head disease symptoms in the Great Plains."
      Seifers D.L., Harvey T.L., Martin T.J., Haber S., She Y.-M., Ens W., Standing K.G., Salomon R., Gera A.
      Plant Dis. 89:888-895(2005)
      [AGRICOLA] [Europe PMC]
      Cited for: PROTEIN SEQUENCE, ACETYLATION AT MET-1.

    Entry informationi

    Entry nameiNCAP_WYHV
    AccessioniPrimary (citable) accession number: P84254
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 7, 2004
    Last sequence update: December 7, 2004
    Last modified: October 1, 2014
    This is version 29 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Caution

    This protein is few amino acids shorter in its N-terminus than to all other tenuiviruses. It has been described as N-acetylated unlike all other negative stranded virus nucleoproteins. Since no genome sequence is available for this virus, the N-acetylmethionine may be an artifact of protein sequencing.Curated

    Keywords - Technical termi

    Direct protein sequencing

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3