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Protein

60S ribosomal protein L36a

Gene

Rpl36a

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-RNO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-RNO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-RNO-6791226. Major pathway of rRNA processing in the nucleolus and cytosol.
R-RNO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-RNO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-RNO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L36a
Alternative name(s):
60S ribosomal protein L44
Gene namesi
Name:Rpl36a
Synonyms:Rpl44
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componentsi: Chromosome 10, Chromosome 18, Chromosome X

Organism-specific databases

RGDi621156. Rpl36a.

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001491221 – 10660S ribosomal protein L36aAdd BLAST106

Proteomic databases

PaxDbiP83883.
PRIDEiP83883.

PTM databases

iPTMnetiP83883.
PhosphoSitePlusiP83883.

Expressioni

Gene expression databases

BgeeiENSRNOG00000011494.
ExpressionAtlasiP83883. baseline and differential.
GenevisibleiP83883. RN.

Interactioni

Protein-protein interaction databases

MINTiMINT-4578500.
STRINGi10116.ENSRNOP00000054048.

Structurei

3D structure databases

ProteinModelPortaliP83883.
SMRiP83883.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3464. Eukaryota.
COG1631. LUCA.
GeneTreeiENSGT00390000018085.
HOGENOMiHOG000224989.
HOVERGENiHBG056127.
InParanoidiP83883.
KOiK02929.
OMAiYGGFPRP.
OrthoDBiEOG091G12JU.
PhylomeDBiP83883.
TreeFamiTF300213.

Family and domain databases

InterProiView protein in InterPro
IPR000552. Ribosomal_L44e.
IPR011332. Ribosomal_zn-bd.
PANTHERiPTHR10369. PTHR10369. 1 hit.
PfamiView protein in Pfam
PF00935. Ribosomal_L44. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002841. Ribosomal_L44e. 1 hit.
SUPFAMiSSF57829. SSF57829. 1 hit.
PROSITEiView protein in PROSITE
PS01172. RIBOSOMAL_L44E. 1 hit.

Sequencei

Sequence statusi: Complete.

P83883-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVNVPKTRRT FCKKCGKHQP HKVTQYKKGK DSLYAQGKRR YDRKQSGYGG
60 70 80 90 100
QTKPIFRKKA KTTKKIVLRL ECVEPNCRSK RMLAIKRCKH FELGGDKKRK

GQVIQF
Length:106
Mass (Da):12,441
Last modified:January 23, 2007 - v2
Checksum:iAE3308265D70BD26
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M19635 mRNA. Translation: AAB54277.1.
BC058142 mRNA. Translation: AAH58142.1.
PIRiA29820. R6RT36.
RefSeqiNP_001121537.1. NM_001128065.1.
NP_112367.1. NM_031105.2.
XP_017456534.1. XM_017601045.1.
XP_017458726.1. XM_017603237.1.
XP_017458727.1. XM_017603238.1.
UniGeneiRn.112597.
Rn.23433.

Genome annotation databases

EnsembliENSRNOT00000043171; ENSRNOP00000048003; ENSRNOG00000031315.
ENSRNOT00000048198; ENSRNOP00000049014; ENSRNOG00000031022.
ENSRNOT00000057222; ENSRNOP00000054048; ENSRNOG00000011494.
GeneIDi108348287.
292964.
81769.
KEGGirno:108348287.
rno:292964.
rno:81769.
UCSCiRGD:621156. rat.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRL36A_RAT
AccessioniPrimary (citable) accession number: P83883
Secondary accession number(s): P09896, P10661
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 10, 2004
Last sequence update: January 23, 2007
Last modified: June 7, 2017
This is version 115 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families