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Protein

60S ribosomal protein L36a

Gene

Rpl36a

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L36a
Alternative name(s):
60S ribosomal protein L44
Gene namesi
Name:Rpl36a
Synonyms:Rpl44
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componentsi: Chromosome 10, Chromosome 18, Chromosome X

Organism-specific databases

RGDi621156. Rpl36a.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 10610660S ribosomal protein L36aPRO_0000149122Add
BLAST

Proteomic databases

PaxDbiP83883.
PRIDEiP83883.

PTM databases

iPTMnetiP83883.
PhosphoSiteiP83883.

Expressioni

Gene expression databases

BgeeiENSRNOG00000011494.
ExpressionAtlasiP83883. baseline and differential.
GenevisibleiP83883. RN.

Interactioni

Protein-protein interaction databases

MINTiMINT-4578500.
STRINGi10116.ENSRNOP00000054048.

Structurei

3D structure databases

ProteinModelPortaliP83883.
SMRiP83883. Positions 2-96.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L44e family.Curated

Phylogenomic databases

eggNOGiKOG3464. Eukaryota.
COG1631. LUCA.
GeneTreeiENSGT00390000018085.
HOGENOMiHOG000224989.
HOVERGENiHBG056127.
InParanoidiP83883.
KOiK02929.
OMAiVCKTKAQ.
OrthoDBiEOG091G12JU.
PhylomeDBiP83883.
TreeFamiTF300213.

Family and domain databases

Gene3Di3.10.450.80. 1 hit.
InterProiIPR000552. Ribosomal_L44e.
IPR011332. Ribosomal_zn-bd.
[Graphical view]
PANTHERiPTHR10369. PTHR10369. 1 hit.
PfamiPF00935. Ribosomal_L44. 1 hit.
[Graphical view]
ProDomiPD002841. Ribosomal_L44e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF57829. SSF57829. 1 hit.
PROSITEiPS01172. RIBOSOMAL_L44E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P83883-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVNVPKTRRT FCKKCGKHQP HKVTQYKKGK DSLYAQGKRR YDRKQSGYGG
60 70 80 90 100
QTKPIFRKKA KTTKKIVLRL ECVEPNCRSK RMLAIKRCKH FELGGDKKRK

GQVIQF
Length:106
Mass (Da):12,441
Last modified:January 23, 2007 - v2
Checksum:iAE3308265D70BD26
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M19635 mRNA. Translation: AAB54277.1.
BC058142 mRNA. Translation: AAH58142.1.
PIRiA29820. R6RT36.
RefSeqiNP_001121537.1. NM_001128065.1.
NP_112367.1. NM_031105.2.
XP_003751786.1. XM_003751738.3.
UniGeneiRn.112597.
Rn.23433.

Genome annotation databases

EnsembliENSRNOT00000043171; ENSRNOP00000048003; ENSRNOG00000031315.
ENSRNOT00000048198; ENSRNOP00000049014; ENSRNOG00000031022.
ENSRNOT00000057222; ENSRNOP00000054048; ENSRNOG00000011494.
GeneIDi100912182.
292964.
81769.
KEGGirno:100912182.
rno:292964.
rno:81769.
UCSCiRGD:621156. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M19635 mRNA. Translation: AAB54277.1.
BC058142 mRNA. Translation: AAH58142.1.
PIRiA29820. R6RT36.
RefSeqiNP_001121537.1. NM_001128065.1.
NP_112367.1. NM_031105.2.
XP_003751786.1. XM_003751738.3.
UniGeneiRn.112597.
Rn.23433.

3D structure databases

ProteinModelPortaliP83883.
SMRiP83883. Positions 2-96.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-4578500.
STRINGi10116.ENSRNOP00000054048.

PTM databases

iPTMnetiP83883.
PhosphoSiteiP83883.

Proteomic databases

PaxDbiP83883.
PRIDEiP83883.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000043171; ENSRNOP00000048003; ENSRNOG00000031315.
ENSRNOT00000048198; ENSRNOP00000049014; ENSRNOG00000031022.
ENSRNOT00000057222; ENSRNOP00000054048; ENSRNOG00000011494.
GeneIDi100912182.
292964.
81769.
KEGGirno:100912182.
rno:292964.
rno:81769.
UCSCiRGD:621156. rat.

Organism-specific databases

CTDi6166.
6173.
RGDi621156. Rpl36a.

Phylogenomic databases

eggNOGiKOG3464. Eukaryota.
COG1631. LUCA.
GeneTreeiENSGT00390000018085.
HOGENOMiHOG000224989.
HOVERGENiHBG056127.
InParanoidiP83883.
KOiK02929.
OMAiVCKTKAQ.
OrthoDBiEOG091G12JU.
PhylomeDBiP83883.
TreeFamiTF300213.

Miscellaneous databases

PROiP83883.

Gene expression databases

BgeeiENSRNOG00000011494.
ExpressionAtlasiP83883. baseline and differential.
GenevisibleiP83883. RN.

Family and domain databases

Gene3Di3.10.450.80. 1 hit.
InterProiIPR000552. Ribosomal_L44e.
IPR011332. Ribosomal_zn-bd.
[Graphical view]
PANTHERiPTHR10369. PTHR10369. 1 hit.
PfamiPF00935. Ribosomal_L44. 1 hit.
[Graphical view]
ProDomiPD002841. Ribosomal_L44e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF57829. SSF57829. 1 hit.
PROSITEiPS01172. RIBOSOMAL_L44E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRL36A_RAT
AccessioniPrimary (citable) accession number: P83883
Secondary accession number(s): P09896, P10661
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 10, 2004
Last sequence update: January 23, 2007
Last modified: September 7, 2016
This is version 106 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.