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P83692

- GANA_THIHE

UniProt

P83692 - GANA_THIHE

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Protein

Arabinogalactan endo-beta-1,4-galactanase

Gene
N/A
Organism
Thielavia heterothallica (Myceliophthora thermophila)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at protein leveli

Functioni

Catalytic activityi

The enzyme specifically hydrolyzes (1->4)-beta-D-galactosidic linkages in type I arabinogalactans.1 Publication

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei135 – 1351Proton donorBy similarity
Active sitei245 – 2451NucleophileBy similarity

GO - Molecular functioni

  1. arabinogalactan endo-1,4-beta-galactosidase activity Source: UniProtKB-EC
  2. glucosidase activity Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: UniProtKB
  4. polysaccharide binding Source: UniProtKB

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. cell wall macromolecule catabolic process Source: UniProtKB
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Protein family/group databases

CAZyiGH53. Glycoside Hydrolase Family 53.
mycoCLAPiGAN53A_MYCTH.

Names & Taxonomyi

Protein namesi
Recommended name:
Arabinogalactan endo-beta-1,4-galactanase (EC:3.2.1.89)
Alternative name(s):
Endo-1,4-beta-galactanase
Short name:
Galactanase
OrganismiThielavia heterothallica (Myceliophthora thermophila)
Taxonomic identifieri78579 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesSordariomycetidaeSordarialesChaetomiaceaeMyceliophthora

Subcellular locationi

GO - Cellular componenti

  1. extraorganismal space Source: UniProtKB
Complete GO annotation...

Pathology & Biotechi

Mutagenesis

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Mutagenesisi90 – 912AH → SD: Lowers pH profile by 0.5 units. 1 Publication

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 332332Arabinogalactan endo-beta-1,4-galactanasePRO_0000057706Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi111 – 1111N-linked (GlcNAc...)1 Publication

Keywords - PTMi

Glycoprotein

Structurei

Secondary structure

1
332
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi3 – 86Combined sources
Helixi12 – 176Combined sources
Helixi32 – 387Combined sources
Beta strandi43 – 486Combined sources
Helixi59 – 7113Combined sources
Beta strandi75 – 806Combined sources
Beta strandi83 – 853Combined sources
Helixi102 – 12221Combined sources
Beta strandi128 – 1358Combined sources
Helixi136 – 1383Combined sources
Helixi150 – 16516Combined sources
Beta strandi174 – 1807Combined sources
Helixi185 – 19612Combined sources
Beta strandi199 – 2013Combined sources
Helixi203 – 2053Combined sources
Beta strandi208 – 2125Combined sources
Beta strandi215 – 2173Combined sources
Helixi223 – 23715Combined sources
Beta strandi240 – 2456Combined sources
Helixi261 – 2633Combined sources
Helixi270 – 28516Combined sources
Beta strandi290 – 2967Combined sources
Helixi301 – 3033Combined sources
Turni304 – 3074Combined sources
Beta strandi308 – 3125Combined sources
Beta strandi320 – 3223Combined sources
Helixi324 – 3307Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1HJSX-ray1.87A/B/C/D1-332[»]
1HJUX-ray2.15A/B/C/D1-332[»]
ProteinModelPortaliP83692.
SMRiP83692. Positions 1-332.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP83692.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 53 family.1 Publication

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR011683. Glyco_hydro_53.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF07745. Glyco_hydro_53. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

P83692-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
ALTYRGVDWS SVVVEERAGV SYKNTNGNAQ PLENILAANG VNTVRQRVWV
60 70 80 90 100
NPADGNYNLD YNIAIAKRAK AAGLGVYIDF HYSDTWADPA HQTMPAGWPS
110 120 130 140 150
DIDNLSWKLY NYTLDAANKL QNAGIQPTIV SIGNEIRAGL LWPTGRTENW
160 170 180 190 200
ANIARLLHSA AWGIKDSSLS PKPKIMIHLD NGWDWGTQNW WYTNVLKQGT
210 220 230 240 250
LELSDFDMMG VSFYPFYSSS ATLSALKSSL DNMAKTWNKE IAVVETNWPI
260 270 280 290 300
SCPNPRYSFP SDVKNIPFSP EGQTTFITNV ANIVSSVSRG VGLFYWEPAW
310 320 330
IHNANLGSSC ADNTMFSQSG QALSSLSVFQ RI
Length:332
Mass (Da):36,812
Last modified:December 15, 2003 - v1
Checksum:i71CA092FDB1D43DC
GO

Cross-referencesi

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1HJS X-ray 1.87 A/B/C/D 1-332 [» ]
1HJU X-ray 2.15 A/B/C/D 1-332 [» ]
ProteinModelPortali P83692.
SMRi P83692. Positions 1-332.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH53. Glycoside Hydrolase Family 53.
mycoCLAPi GAN53A_MYCTH.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Miscellaneous databases

EvolutionaryTracei P83692.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR011683. Glyco_hydro_53.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
Pfami PF07745. Glyco_hydro_53. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Structure of two fungal beta-1,4-galactanases: searching for the basis for temperature and pH optimum."
    Le Nours J., Ryttersgaard C., Lo Leggio L., Oestergaard P.R., Borchert T.V., Christensen L.L.H., Larsen S.
    Protein Sci. 12:1195-1204(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.9 ANGSTROMS), CATALYTIC ACTIVITY, GLYCOSYLATION AT ASN-111, MUTAGENESIS OF 90-ASP-HIS-91.

Entry informationi

Entry nameiGANA_THIHE
AccessioniPrimary (citable) accession number: P83692
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 7, 2004
Last sequence update: December 15, 2003
Last modified: November 26, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Has a pH range of 5.5-8.5 with optimum of 7.0; and a temperature optimum of 65 degrees Celsius at pH 6.5.1 Publication

Keywords - Technical termi

3D-structure

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3