Reviewed,
UniProtKB/Swiss-Prot P83658 (DISS_ECHCA)
Last modified
November 24, 2009.
Version 39.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
Customize display | text xml rdf/xml gff fasta |
Names and origin
| Protein names | Recommended name: Disintegrin schistatin |
| Organism | Echis carinatus (Saw-scaled viper) |
| Taxonomic identifier | 40353 [NCBI] |
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Lepidosauria › Squamata › Scleroglossa › Serpentes › Colubroidea › Viperidae › Viperinae › Echis |
Protein attributes
| Sequence length | 64 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | May bind with both glycoprotein IIb-IIIa (ITGA2B/ITGB3) and alphavbeta3 (ITGAV/ITGB3) integrins, and may inhibit platelet aggregation. |
| Subunit structure | |
| Subcellular location | |
| Tissue specificity | Expressed by the venom gland. Ref.1 |
| Sequence similarities | Belongs to the disintegrin family. Contains 1 disintegrin domain. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Blood coagulation Cell adhesion |
| Cellular component | Secreted |
| Molecular function | Toxin |
| PTM | Disulfide bond |
| Technical term | 3D-structure Direct protein sequencing |
| Gene Ontology (GO) | |
| Biological process | blood coagulation Inferred from electronic annotation. Source: UniProtKB-KW cell adhesionInferred from electronic annotation. Source: UniProtKB-KW pathogenesisInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | extracellular region Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | protein binding Inferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||||||||
Molecule processing | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 64 | 64 | Disintegrin schistatin | PRO_0000101800 | |||||||||||||
Regions | |||||||||||||||||
| Domain | 1 – 64 | 64 | Disintegrin | ||||||||||||||
| Motif | 42 – 44 | 3 | Cell attachment site By similarity UniProtKB P81631 | ||||||||||||||
Amino acid modifications | |||||||||||||||||
| Disulfide bond | 6 ↔ 29 | Ref.1 Ref.3 | |||||||||||||||
| Disulfide bond | 7 | Interchain (with C-12) Ref.1 Ref.3 | |||||||||||||||
| Disulfide bond | 12 | Interchain (with C-7) Ref.1 Ref.3 | |||||||||||||||
| Disulfide bond | 20 ↔ 26 | Ref.1 Ref.3 | |||||||||||||||
| Disulfide bond | 25 ↔ 50 | Ref.1 Ref.3 | |||||||||||||||
| Disulfide bond | 38 ↔ 57 | Ref.1 Ref.3 | |||||||||||||||
Experimental info | |||||||||||||||||
| Sequence conflict | 8 | 1 | D → P AA sequence Ref.2 | ||||||||||||||
Secondary structure | |||||||||||||||||
Helix Strand Turn | |||||||||||||||||
| Turn | 9 – 12 | 4 | |||||||||||||||
| Beta strand | 21 – 23 | 3 | |||||||||||||||
| Beta strand | 37 – 39 | 3 | |||||||||||||||
| Beta strand | 42 – 45 | 4 | |||||||||||||||
Sequences
References
| [1] | Bilgrami S., Jabeen T., Kumar J., Yadav S., Sharma S., Kaur P., Singh T.P. Submitted (SEP-2003) to UniProtKB Cited for: PROTEIN SEQUENCE, SUBUNIT, SUBCELLULAR LOCATION, TISSUE SPECIFICITY, DISULFIDE BONDS. Tissue: Venom. |
| [2] | "Purification, crystallization and preliminary X-ray diffraction studies of disintegrin (schistatin) from saw-scaled viper (Echis carinatus)." Tomar S., Yadav S., Chandra V., Kumar P., Singh T.P. Acta Crystallogr. D 57:1669-1670(2001) [PubMed: 11679739] [Abstract] Cited for: PROTEIN SEQUENCE OF 1-19, X-RAY CRYSTALLOGRAPHY (2.5 ANGSTROMS). Tissue: Venom. |
| [3] | "Crystal structure of schistatin, a disintegrin homodimer from saw-scaled viper (Echis carinatus) at 2.5 A resolution." Bilgrami S., Tomar S., Yadav S., Kaur P., Kumar J., Jabeen T., Sharma S., Singh T.P. J. Mol. Biol. 341:829-837(2004) [PubMed: 15317139] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.5 ANGSTROMS), DISULFIDE BONDS. |
| + | Additional computationally mapped references. |
Cross-references
3D structure databases | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDBe RCSB PDB PDBj |
| ||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||
| HOVERGEN | P83658. | ||||||||||||||||||
Family and domain databases | |||||||||||||||||||
| InterPro | IPR001762. Blood-coag_inhib_Disintegrin. IPR018358. Disintegrin_CS. [Graphical view] | ||||||||||||||||||
| Gene3D | G3DSA:4.10.70.10. Blood-coag_inhib_Disintegrin. 1 hit. | ||||||||||||||||||
| Pfam | PF00200. Disintegrin. 1 hit. [Graphical view] | ||||||||||||||||||
| PRINTS | PR00289. DISINTEGRIN. | ||||||||||||||||||
| SMART | SM00050. DISIN. 1 hit. [Graphical view] | ||||||||||||||||||
| PROSITE | PS00427. DISINTEGRIN_1. 1 hit. PS50214. DISINTEGRIN_2. 1 hit. [Graphical view] | ||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||
Entry information
| Entry name | DISS_ECHCA | ||||||||
| Accession | Primary (citable) accession number: P83658 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | Tox-Prot (Toxin Annotation Project) | ||||||||
Relevant documents
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with


