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Protein

39S ribosomal protein L40, mitochondrial

Gene

Mrpl40

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-RNO-5389840 Mitochondrial translation elongation
R-RNO-5419276 Mitochondrial translation termination

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L40, mitochondrial
Short name:
L40mt
Short name:
MRP-L40
Gene namesi
Name:Mrpl40
OrganismiRattus norvegicus (Rat)Curated
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 11

Organism-specific databases

RGDi1565444 Mrpl40

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 46Mitochondrion1 PublicationAdd BLAST46
ChainiPRO_000008768747 – 20639S ribosomal protein L40, mitochondrialAdd BLAST160

Proteomic databases

PaxDbiP83565
PRIDEiP83565

Expressioni

Gene expression databases

BgeeiENSRNOG00000049686
GenevisibleiP83565 RN

Interactioni

Subunit structurei

Component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinct proteins.By similarity

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000065376

Structurei

3D structure databases

SMRiP83565
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG4778 Eukaryota
ENOG4111PQW LUCA
GeneTreeiENSGT00390000010239
HOVERGENiHBG044505
InParanoidiP83565
KOiK17421
OMAiRCLHTTP
OrthoDBiEOG091G0RI9
PhylomeDBiP83565

Family and domain databases

InterProiView protein in InterPro
IPR019192 Ribosomal_L28/L40_mit
PfamiView protein in Pfam
PF09812 MRP-L28, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P83565-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATAAMLCAA RALRPRSWIP GTCQAQVRHT HQRASLLSFW ELIPMRAEPL
60 70 80 90 100
RKKKKVDPRK DQAAKDRLKK RIRKLERASQ ELVPIEDFIT PVRFLDKSRQ
110 120 130 140 150
RPQEEHSFEE SERRALLLKR WALYKQQEHE MERDAIRAML EAQQEALEQL
160 170 180 190 200
KLESTELYAE AIKRDTSLFP FEKEGPHYTP PVPNYQAPEG RYNDITKVYT

QVEFKR
Length:206
Mass (Da):24,397
Last modified:January 23, 2007 - v2
Checksum:i500D285FBB8B1E71
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti56V → Y AA sequence (PubMed:9857009).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC097472 mRNA Translation: AAH97472.1
RefSeqiNP_001020036.1, NM_001024865.1
UniGeneiRn.3831

Genome annotation databases

EnsembliENSRNOT00000071159; ENSRNOP00000065376; ENSRNOG00000049686
GeneIDi287962
KEGGirno:287962

Similar proteinsi

Entry informationi

Entry nameiRM40_RAT
AccessioniPrimary (citable) accession number: P83565
Secondary accession number(s): Q4V8A4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 19, 2003
Last sequence update: January 23, 2007
Last modified: May 23, 2018
This is version 70 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

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