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P83565

- RM40_RAT

UniProt

P83565 - RM40_RAT

Protein

39S ribosomal protein L40, mitochondrial

Gene

Mrpl40

Organism
Rattus norvegicus (Rat)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 52 (01 Oct 2014)
      Sequence version 2 (23 Jan 2007)
      Previous versions | rss
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    Functioni

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    39S ribosomal protein L40, mitochondrial
    Short name:
    L40mt
    Short name:
    MRP-L40
    Gene namesi
    Name:Mrpl40
    OrganismiRattus norvegicus (Rat)Curated
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 11

    Organism-specific databases

    RGDi1565444. Mrpl40.

    Subcellular locationi

    GO - Cellular componenti

    1. mitochondrial ribosome Source: UniProtKB

    Keywords - Cellular componenti

    Mitochondrion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transit peptidei1 – 4646Mitochondrion1 PublicationAdd
    BLAST
    Chaini47 – 20616039S ribosomal protein L40, mitochondrialPRO_0000087687Add
    BLAST

    Proteomic databases

    PRIDEiP83565.

    Expressioni

    Gene expression databases

    GenevestigatoriP83565.

    Family & Domainsi

    Keywords - Domaini

    Transit peptide

    Phylogenomic databases

    GeneTreeiENSGT00390000010239.
    HOVERGENiHBG044505.
    KOiK17421.
    OMAiLYKQQEH.
    OrthoDBiEOG71VSVJ.
    PhylomeDBiP83565.

    Family and domain databases

    InterProiIPR019192. Ribosomal_L28/L40_mit.
    [Graphical view]
    PfamiPF09812. MRP-L28. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P83565-1 [UniParc]FASTAAdd to Basket

    « Hide

    MATAAMLCAA RALRPRSWIP GTCQAQVRHT HQRASLLSFW ELIPMRAEPL    50
    RKKKKVDPRK DQAAKDRLKK RIRKLERASQ ELVPIEDFIT PVRFLDKSRQ 100
    RPQEEHSFEE SERRALLLKR WALYKQQEHE MERDAIRAML EAQQEALEQL 150
    KLESTELYAE AIKRDTSLFP FEKEGPHYTP PVPNYQAPEG RYNDITKVYT 200
    QVEFKR 206
    Length:206
    Mass (Da):24,397
    Last modified:January 23, 2007 - v2
    Checksum:i500D285FBB8B1E71
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti56 – 561V → Y AA sequence (PubMed:9857009)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC097472 mRNA. Translation: AAH97472.1.
    RefSeqiNP_001020036.1. NM_001024865.1.
    UniGeneiRn.3831.

    Genome annotation databases

    EnsembliENSRNOT00000071159; ENSRNOP00000065376; ENSRNOG00000049686.
    GeneIDi287962.
    KEGGirno:287962.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC097472 mRNA. Translation: AAH97472.1 .
    RefSeqi NP_001020036.1. NM_001024865.1.
    UniGenei Rn.3831.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi P83565.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000071159 ; ENSRNOP00000065376 ; ENSRNOG00000049686 .
    GeneIDi 287962.
    KEGGi rno:287962.

    Organism-specific databases

    CTDi 64976.
    RGDi 1565444. Mrpl40.

    Phylogenomic databases

    GeneTreei ENSGT00390000010239.
    HOVERGENi HBG044505.
    KOi K17421.
    OMAi LYKQQEH.
    OrthoDBi EOG71VSVJ.
    PhylomeDBi P83565.

    Miscellaneous databases

    NextBioi 627307.
    PROi P83565.

    Gene expression databases

    Genevestigatori P83565.

    Family and domain databases

    InterProi IPR019192. Ribosomal_L28/L40_mit.
    [Graphical view ]
    Pfami PF09812. MRP-L28. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Testis.
    2. "Mammalian mitochondrial ribosomal proteins. N-terminal amino acid sequencing, characterization, and identification of corresponding gene sequences."
      Goldschmidt-Reisin S., Kitakawa M., Herfurth E., Wittmann-Liebold B., Grohmann L., Graack H.-R.
      J. Biol. Chem. 273:34828-34836(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: PROTEIN SEQUENCE OF 47-75.

    Entry informationi

    Entry nameiRM40_RAT
    AccessioniPrimary (citable) accession number: P83565
    Secondary accession number(s): Q4V8A4
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 19, 2003
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 52 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Direct protein sequencing, Reference proteome

    External Data

    Dasty 3