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Protein

28S ribosomal protein S16, mitochondrial

Gene

MRPS16

Organism
Bos taurus (Bovine)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • structural constituent of ribosome Source: UniProtKB

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-BTA-5368286. Mitochondrial translation initiation.
R-BTA-5389840. Mitochondrial translation elongation.
R-BTA-5419276. Mitochondrial translation termination.

Names & Taxonomyi

Protein namesi
Recommended name:
28S ribosomal protein S16, mitochondrial
Short name:
MRP-S16
Short name:
S16mt
Gene namesi
Name:MRPS16
Synonyms:RPMS16
OrganismiBos taurus (Bovine)
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 28

Subcellular locationi

GO - Cellular componenti

  • mitochondrial inner membrane Source: Reactome
  • mitochondrial small ribosomal subunit Source: UniProtKB
Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 34MitochondrionSequence analysisAdd BLAST34
ChainiPRO_000016732735 – 13528S ribosomal protein S16, mitochondrialAdd BLAST101

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei130PhosphothreonineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiP82915.
PRIDEiP82915.

PTM databases

iPTMnetiP82915.

Expressioni

Gene expression databases

BgeeiENSBTAG00000000950.

Interactioni

Subunit structurei

Component of the mitochondrial ribosome small subunit (28S) which comprises a 12S rRNA and about 30 distinct proteins.1 Publication

Protein-protein interaction databases

IntActiP82915. 1 interactor.
STRINGi9913.ENSBTAP00000001255.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3JD5electron microscopy7.00P1-135[»]
ProteinModelPortaliP82915.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S16P family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG3419. Eukaryota.
COG0228. LUCA.
GeneTreeiENSGT00390000014309.
HOGENOMiHOG000246720.
HOVERGENiHBG017758.
InParanoidiP82915.
KOiK02959.
OMAiEQLGCYD.
OrthoDBiEOG091G15N9.
TreeFamiTF105637.

Family and domain databases

Gene3Di3.30.1320.10. 1 hit.
HAMAPiMF_00385. Ribosomal_S16. 1 hit.
InterProiIPR000307. Ribosomal_S16.
IPR023803. Ribosomal_S16_dom.
[Graphical view]
PANTHERiPTHR12919. PTHR12919. 1 hit.
PfamiPF00886. Ribosomal_S16. 1 hit.
[Graphical view]
SUPFAMiSSF54565. SSF54565. 1 hit.
TIGRFAMsiTIGR00002. S16. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P82915-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVQLTTVLCK AYRGGHLTIR LALGGCTNRP FYRIVAAHNK CPRDGRFVEQ
60 70 80 90 100
LGSYDPMPNS HGEKLVALNL DRIRHWIGCG AHLSKPVEKL LGLSGFFPLH
110 120 130
PMVITNAERL RRKRAQEVLL AAQKTDTEAT ETKEN
Length:135
Mass (Da):15,132
Last modified:January 23, 2007 - v2
Checksum:i96264C9886ED1E6B
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti62 – 63GE → AD AA sequence (PubMed:11279123).Curated2

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC118470 mRNA. Translation: AAI18471.1.
RefSeqiNP_001068942.1. NM_001075474.2.
UniGeneiBt.88967.

Genome annotation databases

EnsembliENSBTAT00000001255; ENSBTAP00000001255; ENSBTAG00000000950.
GeneIDi510899.
KEGGibta:510899.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC118470 mRNA. Translation: AAI18471.1.
RefSeqiNP_001068942.1. NM_001075474.2.
UniGeneiBt.88967.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3JD5electron microscopy7.00P1-135[»]
ProteinModelPortaliP82915.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP82915. 1 interactor.
STRINGi9913.ENSBTAP00000001255.

PTM databases

iPTMnetiP82915.

Proteomic databases

PaxDbiP82915.
PRIDEiP82915.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSBTAT00000001255; ENSBTAP00000001255; ENSBTAG00000000950.
GeneIDi510899.
KEGGibta:510899.

Organism-specific databases

CTDi51021.

Phylogenomic databases

eggNOGiKOG3419. Eukaryota.
COG0228. LUCA.
GeneTreeiENSGT00390000014309.
HOGENOMiHOG000246720.
HOVERGENiHBG017758.
InParanoidiP82915.
KOiK02959.
OMAiEQLGCYD.
OrthoDBiEOG091G15N9.
TreeFamiTF105637.

Enzyme and pathway databases

ReactomeiR-BTA-5368286. Mitochondrial translation initiation.
R-BTA-5389840. Mitochondrial translation elongation.
R-BTA-5419276. Mitochondrial translation termination.

Gene expression databases

BgeeiENSBTAG00000000950.

Family and domain databases

Gene3Di3.30.1320.10. 1 hit.
HAMAPiMF_00385. Ribosomal_S16. 1 hit.
InterProiIPR000307. Ribosomal_S16.
IPR023803. Ribosomal_S16_dom.
[Graphical view]
PANTHERiPTHR12919. PTHR12919. 1 hit.
PfamiPF00886. Ribosomal_S16. 1 hit.
[Graphical view]
SUPFAMiSSF54565. SSF54565. 1 hit.
TIGRFAMsiTIGR00002. S16. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRT16_BOVIN
AccessioniPrimary (citable) accession number: P82915
Secondary accession number(s): Q17QA2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: January 23, 2007
Last modified: October 5, 2016
This is version 97 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.