Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

P81827

- UP1_RAT

UniProt

P81827 - UP1_RAT

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Urinary protein 1

Gene
N/A
Organism
Rattus norvegicus (Rat)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Urinary protein 1
Short name:
UP-1
Short name:
rUP-1
Alternative name(s):
Liver regeneration-related protein LRRG05
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 8

Subcellular locationi

GO - Cellular componenti

  1. extracellular region Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 21212 PublicationsAdd
BLAST
Chaini22 – 10180Urinary protein 1PRO_0000036169Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi24 ↔ 51Sequence Analysis
Disulfide bondi27 ↔ 36Sequence Analysis
Disulfide bondi43 ↔ 70Sequence Analysis
Glycosylationi67 – 671N-linked (GlcNAc...)Sequence Analysis
Disulfide bondi73 ↔ 89Sequence Analysis
Disulfide bondi90 ↔ 96Sequence Analysis

Post-translational modificationi

N-glycosylated.Curated

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PRIDEiP81827.

Expressioni

Gene expression databases

GenevestigatoriP81827.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000050106.

Family & Domainsi

Sequence similaritiesi

Contains 1 UPAR/Ly6 domain.Curated

Keywords - Domaini

Signal

Phylogenomic databases

GeneTreeiENSGT00700000105314.
HOGENOMiHOG000082505.
HOVERGENiHBG017754.
InParanoidiP81827.
OMAiGFANERN.
OrthoDBiEOG7BKCXJ.
PhylomeDBiP81827.
TreeFamiTF337781.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P81827-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGKPILLLPL GLSLLMSSLL ALQCFRCESL DSTGLCRVGR RICQTYPDEI
60 70 80 90 100
CAWVVVTTRD GKFVYGNQSC AECIGTTVEH GSLIISTNCC SATPFCNMVH

P
Length:101
Mass (Da):10,960
Last modified:May 30, 2000 - v1
Checksum:i03021BC9FFE75646
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF198441 mRNA. Translation: AAF15598.1.
AY327506 mRNA. Translation: AAP97738.1.
RefSeqiNP_001030122.2. NM_001034950.2.
UniGeneiRn.144564.
Rn.224549.

Genome annotation databases

EnsembliENSRNOT00000042860; ENSRNOP00000050106; ENSRNOG00000045799.
GeneIDi619560.
KEGGirno:619560.
UCSCiRGD:1561250. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF198441 mRNA. Translation: AAF15598.1 .
AY327506 mRNA. Translation: AAP97738.1 .
RefSeqi NP_001030122.2. NM_001034950.2.
UniGenei Rn.144564.
Rn.224549.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10116.ENSRNOP00000050106.

Proteomic databases

PRIDEi P81827.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000042860 ; ENSRNOP00000050106 ; ENSRNOG00000045799 .
GeneIDi 619560.
KEGGi rno:619560.
UCSCi RGD:1561250. rat.

Organism-specific databases

CTDi 619560.

Phylogenomic databases

GeneTreei ENSGT00700000105314.
HOGENOMi HOG000082505.
HOVERGENi HBG017754.
InParanoidi P81827.
OMAi GFANERN.
OrthoDBi EOG7BKCXJ.
PhylomeDBi P81827.
TreeFami TF337781.

Miscellaneous databases

NextBioi 714650.

Gene expression databases

Genevestigatori P81827.

Family and domain databases

ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The characterisation of novel secreted Ly-6 proteins from rat urine by the combined use of two-dimensional gel electrophoresis, microbore high performance liquid chromatography and expressed sequence tag data."
    Southan C., Cutler P., Birrell H., Connell J., Fantom K.G.M., Sims M., Shaikh N., Schneider K.
    Proteomics 2:187-196(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA], PROTEIN SEQUENCE OF 22-47, IDENTIFICATION.
    Tissue: Urine.
  2. "Liver regeneration after PH."
    Xu C.S., Li W.Q., Li Y.C., Han H.P., Wang G.P., Chai L.Q., Yang K.J., Yan H.M., Chang C.F., Zhao L.F., Ma H., Wang L., Wang S.F., Shi J.B., Rahman S., Wang Q.N., Zhang J.B.
    Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Liver.
  3. "Proteins of rat serum, urine, and cerebrospinal fluid: VI. Further protein identifications and interstrain comparison."
    Wait R., Gianazza E., Eberini I., Sironi L., Dunn M.J., Gemeiner M., Miller I.
    Electrophoresis 22:3043-3052(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 22-37 AND 42-62.

Entry informationi

Entry nameiUP1_RAT
AccessioniPrimary (citable) accession number: P81827
Secondary accession number(s): Q53ZD7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: May 30, 2000
Last modified: October 29, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3