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Protein

Chitin-binding allergen Bra r 2

Gene
N/A
Organism
Brassica rapa subsp. rapa (Turnip)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

Chitin-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Chitin-binding allergen Bra r 2
Alternative name(s):
Allergen: Bra r 2
OrganismiBrassica rapa subsp. rapa (Turnip)
Taxonomic identifieri51350 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeBrassiceaeBrassica

Pathology & Biotechi

Allergenic propertiesi

Causes an allergic reaction in human.

Keywords - Diseasei

Allergen

Protein family/group databases

Allergomei1264. Bra r 2.
3168. Bra r 2.0101.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini‹1 – ›91›91Chitin-binding allergen Bra r 2PRO_0000124813Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi7 ↔ 19PROSITE-ProRule annotation
Disulfide bondi12 ↔ 26PROSITE-ProRule annotation
Disulfide bondi32 ↔ 55PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bond

Structurei

3D structure databases

ProteinModelPortaliP81729.
SMRiP81729. Positions 30-80.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini‹1 – 26›26Chitin-binding type-1PROSITE-ProRule annotationAdd
BLAST
Domaini27 – ›91›65BarwinPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 barwin domain.PROSITE-ProRule annotation
Contains 1 chitin-binding type-1 domain.PROSITE-ProRule annotation

Family and domain databases

Gene3Di2.40.40.10. 1 hit.
3.30.60.10. 1 hit.
InterProiIPR001153. Barwin_dom.
IPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR009009. RlpA-like_DPBB.
[Graphical view]
PfamiPF00967. Barwin. 1 hit.
PF00187. Chitin_bind_1. 1 hit.
[Graphical view]
PRINTSiPR00451. CHITINBINDNG.
ProDomiPD004535. Barwin. 1 hit.
PD000609. Chitin_bd_1. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTiSM00270. ChtBD1. 1 hit.
[Graphical view]
SUPFAMiSSF50685. SSF50685. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEiPS51174. BARWIN_3. 1 hit.
PS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragments.

P81729-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
QAGGQTCAGN ICCSQYGYCG TTADYCSPDN NCQATYHYYN PAQNNWDLRA
60 70 80 90
VSAYCSTWDA DKPYSWRYGW TAFCGPAGPR CLRTNAAVTV R
Length:91
Mass (Da):10,044
Last modified:May 30, 2000 - v1
Checksum:iB73C9C8D8DFE79D8
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11
Non-adjacent residuesi33 – 342Curated
Non-adjacent residuesi67 – 682Curated
Non-adjacent residuesi80 – 812Curated
Non-adjacent residuesi83 – 842Curated
Non-terminal residuei91 – 911

Cross-referencesi

3D structure databases

ProteinModelPortaliP81729.
SMRiP81729. Positions 30-80.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

Allergomei1264. Bra r 2.
3168. Bra r 2.0101.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.40.40.10. 1 hit.
3.30.60.10. 1 hit.
InterProiIPR001153. Barwin_dom.
IPR001002. Chitin-bd_1.
IPR018371. Chitin-binding_1_CS.
IPR009009. RlpA-like_DPBB.
[Graphical view]
PfamiPF00967. Barwin. 1 hit.
PF00187. Chitin_bind_1. 1 hit.
[Graphical view]
PRINTSiPR00451. CHITINBINDNG.
ProDomiPD004535. Barwin. 1 hit.
PD000609. Chitin_bd_1. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTiSM00270. ChtBD1. 1 hit.
[Graphical view]
SUPFAMiSSF50685. SSF50685. 1 hit.
SSF57016. SSF57016. 1 hit.
PROSITEiPS51174. BARWIN_3. 1 hit.
PS00026. CHIT_BIND_I_1. 1 hit.
PS50941. CHIT_BIND_I_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Increased allergen production in turnip (Brassica rapa) by treatments activating defense mechanisms."
    Hanninen A.-R., Mikkola J.H., Kalkkinen N., Turjanmaa K., Ylitalo L., Reunala T., Palosuo T.
    J. Allergy Clin. Immunol. 104:194-201(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE.
    Tissue: Root.

Entry informationi

Entry nameiCHAL_BRARR
AccessioniPrimary (citable) accession number: P81729
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: May 30, 2000
Last modified: October 14, 2015
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Direct protein sequencing

Documents

  1. Allergens
    Nomenclature of allergens and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.