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Protein

Putative type-2 restriction enzyme MjaVIP

Gene

mjaVIRP

Organism
Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Recognizes the double-stranded unmethylated sequence CCGG.

Catalytic activityi

Endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Endonuclease, Hydrolase, Nuclease

Keywords - Biological processi

Restriction system

Protein family/group databases

REBASEi16564. MjaVIP.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative type-2 restriction enzyme MjaVIP (EC:3.1.21.4)
Short name:
R.MjaVIP
Alternative name(s):
Endonuclease MjaVIP
Type II restriction enzyme MjaVIP
Gene namesi
Name:mjaVIRP
Ordered Locus Names:MJ1208.1
OrganismiMethanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Taxonomic identifieri243232 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
ProteomesiUP000000805 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 226226Putative type-2 restriction enzyme MjaVIPPRO_0000077337Add
BLAST

Family & Domainsi

Sequence similaritiesi

To H.pylori HP0262.Curated

Phylogenomic databases

InParanoidiP81326.
KOiK01155.
OMAiKRALWVH.
PhylomeDBiP81326.

Sequencei

Sequence statusi: Complete.

P81326-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLHFGGFIME INHISKILEK EREEYIRNKV EEYLKQGFSK DDAVNKANQS
60 70 80 90 100
WRTYIGHRIQ DVIYNLLKKF LKDSGLKVTT DKALNNRNLP EELDKVKRLI
110 120 130 140 150
AINYGEYLFL PDADVIVYKV ENNDIKIIAI ISVKNSFRER RFETTYWKLK
160 170 180 190 200
LKESPVTSHI KVFLATPDKD NEISYKCPNG KPKKMRIILE YELDGIYFLK
210 220
EDFEETEKAK HFGKIVEDII EISKKL
Length:226
Mass (Da):26,711
Last modified:June 1, 1998 - v1
Checksum:i9A7B306A28A6A2F2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L77117 Genomic DNA. Translation: AAB99221.1.
RefSeqiNP_248204.2. NC_000909.1.
WP_010870721.1. NC_000909.1.

Genome annotation databases

EnsemblBacteriaiAAB99221; AAB99221; MJ_1208.1.
GeneIDi1452612.
KEGGimja:MJ_1209m.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L77117 Genomic DNA. Translation: AAB99221.1.
RefSeqiNP_248204.2. NC_000909.1.
WP_010870721.1. NC_000909.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

REBASEi16564. MjaVIP.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAB99221; AAB99221; MJ_1208.1.
GeneIDi1452612.
KEGGimja:MJ_1209m.

Phylogenomic databases

InParanoidiP81326.
KOiK01155.
OMAiKRALWVH.
PhylomeDBiP81326.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440.

Entry informationi

Entry nameiT2M6_METJA
AccessioniPrimary (citable) accession number: P81326
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: June 1, 1998
Last modified: April 1, 2015
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Methanococcus jannaschii
    Methanococcus jannaschii: entries and gene names
  2. Restriction enzymes and methylases
    Classification of restriction enzymes and methylases and list of entries

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.