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Protein

Ribosome biogenesis protein Nop10

Gene

nop10

Organism
Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein
Biological processRibosome biogenesis, rRNA processing

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosome biogenesis protein Nop10
Gene namesi
Name:nop10
Ordered Locus Names:MJ0116.1
OrganismiMethanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Taxonomic identifieri243232 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
Proteomesi
  • UP000000805 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001490181 – 60Ribosome biogenesis protein Nop10Add BLAST60

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
truBQ576125EBI-9026465,EBI-9026474

Protein-protein interaction databases

DIPiDIP-60500N
IntActiP81303, 1 interactor
STRINGi243232.MJ_0116.1

Structurei

Secondary structure

160
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Turni10 – 12Combined sources3
Beta strandi15 – 20Combined sources6
Beta strandi22 – 24Combined sources3
Helixi43 – 54Combined sources12

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2APOX-ray1.95B1-60[»]
2AQCNMR-A1-60[»]
ProteinModelPortaliP81303
SMRiP81303
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP81303

Family & Domainsi

Sequence similaritiesi

Belongs to the NOP10 family.Curated

Phylogenomic databases

eggNOGiarCOG00906 Archaea
COG2260 LUCA
InParanoidiP81303
KOiK11130
OMAiFRIRKCP
OrthoDBiPOG093Z0D4P
PhylomeDBiP81303

Family and domain databases

Gene3Di2.20.28.40, 1 hit
HAMAPiMF_00803 Nop10, 1 hit
InterProiView protein in InterPro
IPR007264 H/ACA_rnp_Nop10
IPR036756 H/ACA_rnp_Nop10_sf
IPR023532 Nop10_arc-typ
PANTHERiPTHR13305 PTHR13305, 1 hit
PfamiView protein in Pfam
PF04135 Nop10p, 1 hit
SUPFAMiSSF144210 SSF144210, 1 hit

Sequencei

Sequence statusi: Complete.

P81303-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVEMRMKKCP KCGLYTLKEI CPKCGEKTVI PKPPKFSLED RWGKYRRMLK
60
RALKNKNKAE
Length:60
Mass (Da):7,130
Last modified:July 15, 1998 - v1
Checksum:iF803BDAF7F216DE7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L77117 Genomic DNA Translation: AAB98109.1

Genome annotation databases

EnsemblBacteriaiAAB98109; AAB98109; MJ_0116.1
KEGGimja:MJ_0116.1

Similar proteinsi

Entry informationi

Entry nameiNOP10_METJA
AccessioniPrimary (citable) accession number: P81303
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: July 15, 1998
Last modified: May 23, 2018
This is version 93 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

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