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P81117

- NUCB2_MOUSE

UniProt

P81117 - NUCB2_MOUSE

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Protein
Nucleobindin-2
Gene
Nucb2, Nefa
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at protein leveli

Functioni

Calcium-binding protein. May have a role in calcium homeostasis.1 Publication
Nesfatin-1: Anorexigenic peptide, seems to play an important role in hypothalamic pathways regulating food intake and energy homeostasis, acting in a leptin-independent manner. May also exert hypertensive roles and modulate blood pressure through directly acting on peripheral arterial resistance By similarity.1 Publication

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi171 – 22353 By similarity
Add
BLAST
Calcium bindingi254 – 265121
Add
BLAST
Calcium bindingi306 – 317122
Add
BLAST

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. calcium ion binding Source: MGI
Complete GO annotation...

GO - Biological processi

  1. cellular calcium ion homeostasis Source: MGI
Complete GO annotation...

Keywords - Ligandi

Calcium, DNA-binding, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Nucleobindin-2
Alternative name(s):
DNA-binding protein NEFA
Prepronesfatin
Cleaved into the following chain:
Gene namesi
Name:Nucb2
Synonyms:Nefa
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 7

Organism-specific databases

MGIiMGI:1858179. Nucb2.

Subcellular locationi

Cytoplasm. Perikaryon. Endoplasmic reticulum. Golgi apparatus By similarity. Nucleus envelope. Membrane; Peripheral membrane protein By similarity. Secreted
Note: In dendrites and perikarya of brain neurons. Abundant in the ER cisternae and nuclear envelope, but not detected in Golgi, mitochondria or nucleoplasm in neurons. In cell culture, cytoplasmic and secreted.1 Publication
Chain Nesfatin-1 : Secreted By similarity 1 Publication

GO - Cellular componenti

  1. Golgi apparatus Source: UniProtKB-SubCell
  2. cytoplasm Source: MGI
  3. endoplasmic reticulum Source: MGI
  4. endoplasmic reticulum-Golgi intermediate compartment Source: Ensembl
  5. extracellular region Source: UniProtKB-SubCell
  6. nuclear outer membrane Source: MGI
  7. nucleus Source: MGI
  8. perikaryon Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Endoplasmic reticulum, Golgi apparatus, Membrane, Nucleus, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2424 Reviewed prediction
Add
BLAST
Chaini25 – 420396Nucleobindin-2
PRO_0000004166Add
BLAST
Chaini25 – 10682Nesfatin-1
PRO_0000419820Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei332 – 3321Phosphoserine By similarity

Keywords - PTMi

Cleavage on pair of basic residues, Phosphoprotein

Proteomic databases

MaxQBiP81117.
PaxDbiP81117.
PRIDEiP81117.

PTM databases

PhosphoSiteiP81117.

Expressioni

Tissue specificityi

Found in liver, heart, thymus, muscle, intestine, kidney, lung, spleen and throughout the brain, in cerebral cortex, hippocampus, hypothalamus and medulla oblongata. Nucb2 and necdin levels were higher in postmitotic neurons.1 Publication

Gene expression databases

ArrayExpressiP81117.
BgeeiP81117.
CleanExiMM_NUCB2.
GenevestigatoriP81117.

Interactioni

Subunit structurei

Binds to the postmitotic growth suppressor necdin; co-expression abolishes Nucb2 secretion.1 Publication

Protein-protein interaction databases

IntActiP81117. 1 interaction.
MINTiMINT-4104248.

Structurei

3D structure databases

ProteinModelPortaliP81117.
SMRiP81117. Positions 229-327.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini241 – 27636EF-hand 1
Add
BLAST
Domaini293 – 32836EF-hand 2
Add
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni213 – 420208Binds to necdin
Add
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi284 – 29310Asp/Glu-rich (acidic)

Sequence similaritiesi

Belongs to the nucleobindin family.
Contains 2 EF-hand domains.

Keywords - Domaini

Repeat, Signal

Phylogenomic databases

eggNOGiNOG262100.
GeneTreeiENSGT00390000001927.
HOGENOMiHOG000007216.
HOVERGENiHBG052685.
InParanoidiP81117.
OrthoDBiEOG7WQ7SZ.
PhylomeDBiP81117.
TreeFamiTF323218.

Family and domain databases

Gene3Di1.10.238.10. 1 hit.
InterProiIPR011992. EF-hand-dom_pair.
IPR018247. EF_Hand_1_Ca_BS.
IPR002048. EF_hand_dom.
IPR028813. NUCB2.
[Graphical view]
PANTHERiPTHR19237:SF22. PTHR19237:SF22. 1 hit.
PfamiPF13499. EF-hand_7. 1 hit.
[Graphical view]
SMARTiSM00054. EFh. 2 hits.
[Graphical view]
PROSITEiPS00018. EF_HAND_1. 2 hits.
PS50222. EF_HAND_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P81117-1 [UniParc]FASTAAdd to Basket

« Hide

MRWRIIQVQY CFLLVPCMLT ALEAVPIDVD KTKVHNTEPV ENARIEPPDT    50
GLYYDEYLKQ VIEVLETDPH FREKLQKADI EEIRSGRLSQ ELDLVSHKVR 100
TRLDELKRQE VGRLRMLIKA KLDALQDTGM NHHLLLKQFE HLNHQNPNTF 150
ESRDLDMLIK AATADLEQYD RTRHEEFKKY EMMKEHERRE YLKTLSEEKR 200
KEEESKFEEM KRKHEDHPKV NHPGSKDQLK EVWEETDGLD PNDFDPKTFF 250
KLHDVNNDGF LDEQELEALF TRELEKVYNP QNAEDDMIEM EEERLRMREH 300
VMSEIDNNKD RLVTLEEFLR ATEKKEFLEP DSWETLDQQQ LFTEDELKEY 350
ESIIAIQENE LKKRAEELQK QKEDLQRQHD HLEAQKQEYH QAVQHLEQKK 400
LQQGIAPSGP AGELKFEPHT 420
Length:420
Mass (Da):50,304
Last modified:November 2, 2001 - v2
Checksum:i0DEBD51724CB7E72
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti18 – 181M → T in CAA10858. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ222586 mRNA. Translation: CAA10858.1.
BC010459 mRNA. Translation: AAH10459.1.
CCDSiCCDS52372.1.
RefSeqiNP_001123951.1. NM_001130479.2.
XP_006508087.1. XM_006508024.1.
XP_006508088.1. XM_006508025.1.
UniGeneiMm.9901.

Genome annotation databases

EnsembliENSMUST00000032895; ENSMUSP00000032895; ENSMUSG00000030659.
GeneIDi53322.
KEGGimmu:53322.
UCSCiuc009jjk.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ222586 mRNA. Translation: CAA10858.1 .
BC010459 mRNA. Translation: AAH10459.1 .
CCDSi CCDS52372.1.
RefSeqi NP_001123951.1. NM_001130479.2.
XP_006508087.1. XM_006508024.1.
XP_006508088.1. XM_006508025.1.
UniGenei Mm.9901.

3D structure databases

ProteinModelPortali P81117.
SMRi P81117. Positions 229-327.
ModBasei Search...

Protein-protein interaction databases

IntActi P81117. 1 interaction.
MINTi MINT-4104248.

PTM databases

PhosphoSitei P81117.

Proteomic databases

MaxQBi P81117.
PaxDbi P81117.
PRIDEi P81117.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000032895 ; ENSMUSP00000032895 ; ENSMUSG00000030659 .
GeneIDi 53322.
KEGGi mmu:53322.
UCSCi uc009jjk.2. mouse.

Organism-specific databases

CTDi 4925.
MGIi MGI:1858179. Nucb2.

Phylogenomic databases

eggNOGi NOG262100.
GeneTreei ENSGT00390000001927.
HOGENOMi HOG000007216.
HOVERGENi HBG052685.
InParanoidi P81117.
OrthoDBi EOG7WQ7SZ.
PhylomeDBi P81117.
TreeFami TF323218.

Miscellaneous databases

ChiTaRSi NUCB2. mouse.
NextBioi 310129.
PROi P81117.
SOURCEi Search...

Gene expression databases

ArrayExpressi P81117.
Bgeei P81117.
CleanExi MM_NUCB2.
Genevestigatori P81117.

Family and domain databases

Gene3Di 1.10.238.10. 1 hit.
InterProi IPR011992. EF-hand-dom_pair.
IPR018247. EF_Hand_1_Ca_BS.
IPR002048. EF_hand_dom.
IPR028813. NUCB2.
[Graphical view ]
PANTHERi PTHR19237:SF22. PTHR19237:SF22. 1 hit.
Pfami PF13499. EF-hand_7. 1 hit.
[Graphical view ]
SMARTi SM00054. EFh. 2 hits.
[Graphical view ]
PROSITEi PS00018. EF_HAND_1. 2 hits.
PS50222. EF_HAND_2. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The postmitotic growth suppressor necdin interacts with a calcium-binding protein (NEFA) in neuronal cytoplasm."
    Taniguchi N., Taniura H., Niinobe M., Takayama C., Tominaga-Yoshino K., Ogura A., Yoshikawa K.
    J. Biol. Chem. 275:31674-31681(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, SUBUNIT, SUBCELLULAR LOCATION, TISSUE SPECIFICITY.
  2. "cDNA sequence analysis of mouse NEFA gene."
    Hoefig K., Barnikol-Watanabe S., Barnikol H.U., Hilschmann N.
    Submitted (NOV-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: Swiss Webster / NIH.
    Tissue: Embryo.
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: FVB/N.
    Tissue: Mammary tumor.

Entry informationi

Entry nameiNUCB2_MOUSE
AccessioniPrimary (citable) accession number: P81117
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: November 2, 2001
Last modified: July 9, 2014
This is version 120 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi