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Protein

General stress protein 13

Gene

yugI

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Stress response

Enzyme and pathway databases

BioCyciBSUB:BSU31390-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
General stress protein 13
Short name:
GSP13
Gene namesi
Name:yugI
Ordered Locus Names:BSU31390
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemoved1 Publication
Chaini2 – 130129General stress protein 13PRO_0000083862Add
BLAST

Proteomic databases

PaxDbiP80870.

Expressioni

Inductioni

By heat shock, salt stress, oxidative stress, glucose limitation and oxygen limitation.

Interactioni

Subunit structurei

Found in association with the 30S subunit of the ribosome.1 Publication

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100017061.

Structurei

Secondary structure

1
130
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi10 – 1910Combined sources
Beta strandi22 – 287Combined sources
Beta strandi31 – 366Combined sources
Helixi37 – 393Combined sources
Beta strandi41 – 433Combined sources
Helixi48 – 503Combined sources
Beta strandi57 – 6610Combined sources
Turni67 – 704Combined sources
Beta strandi71 – 766Combined sources
Helixi77 – 815Combined sources
Turni90 – 934Combined sources
Beta strandi105 – 1095Combined sources
Helixi126 – 1283Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2K4KNMR-A1-130[»]
ProteinModelPortaliP80870.
SMRiP80870. Positions 3-79.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP80870.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini8 – 7770S1 motifPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 S1 motif domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiCOG1098. LUCA.
HOGENOMiHOG000217052.
InParanoidiP80870.
KOiK07570.
OMAiIQADLNK.
PhylomeDBiP80870.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012340. NA-bd_OB-fold.
IPR000110. Ribosomal_S1.
IPR022967. S1_dom.
IPR003029. S1_domain.
[Graphical view]
PfamiPF00575. S1. 1 hit.
[Graphical view]
PRINTSiPR00681. RIBOSOMALS1.
SMARTiSM00316. S1. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50126. S1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P80870-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAKFEVGSV YTGKVTGLQA YGAFVALDEE TQGLVHISEV THGFVKDINE
60 70 80 90 100
HLSVGDEVQV KVLAVDEEKG KISLSIRATQ AAPEKKESKP RKPKAAQVSE
110 120 130
EASTPQGFNT LKDKLEEWIE MSNRKDLIKK
Length:130
Mass (Da):14,283
Last modified:January 23, 2007 - v3
Checksum:iDC047C02873AB4B9
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti30 – 301E → W AA sequence (PubMed:9298659).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z93934 Genomic DNA. Translation: CAB07921.1.
AL009126 Genomic DNA. Translation: CAB15128.1.
PIRiH70010.
RefSeqiNP_391017.1. NC_000964.3.
WP_003228864.1. NZ_JNCM01000033.1.

Genome annotation databases

EnsemblBacteriaiCAB15128; CAB15128; BSU31390.
GeneIDi11240747.
938849.
KEGGibsu:BSU31390.
PATRICi18978246. VBIBacSub10457_3286.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z93934 Genomic DNA. Translation: CAB07921.1.
AL009126 Genomic DNA. Translation: CAB15128.1.
PIRiH70010.
RefSeqiNP_391017.1. NC_000964.3.
WP_003228864.1. NZ_JNCM01000033.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2K4KNMR-A1-130[»]
ProteinModelPortaliP80870.
SMRiP80870. Positions 3-79.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100017061.

Proteomic databases

PaxDbiP80870.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB15128; CAB15128; BSU31390.
GeneIDi11240747.
938849.
KEGGibsu:BSU31390.
PATRICi18978246. VBIBacSub10457_3286.

Phylogenomic databases

eggNOGiCOG1098. LUCA.
HOGENOMiHOG000217052.
InParanoidiP80870.
KOiK07570.
OMAiIQADLNK.
PhylomeDBiP80870.

Enzyme and pathway databases

BioCyciBSUB:BSU31390-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP80870.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012340. NA-bd_OB-fold.
IPR000110. Ribosomal_S1.
IPR022967. S1_dom.
IPR003029. S1_domain.
[Graphical view]
PfamiPF00575. S1. 1 hit.
[Graphical view]
PRINTSiPR00681. RIBOSOMALS1.
SMARTiSM00316. S1. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50126. S1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiGS13_BACSU
AccessioniPrimary (citable) accession number: P80870
Secondary accession number(s): O05238
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: January 23, 2007
Last modified: September 7, 2016
This is version 104 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.