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Protein

General stress protein 13

Gene

yugI

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Stress response

Enzyme and pathway databases

BioCyciBSUB:BSU31390-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
General stress protein 13
Short name:
GSP13
Gene namesi
Name:yugI
Ordered Locus Names:BSU31390
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00000838622 – 130General stress protein 13Add BLAST129

Proteomic databases

PaxDbiP80870.
PRIDEiP80870.

Expressioni

Inductioni

By heat shock, salt stress, oxidative stress, glucose limitation and oxygen limitation.

Interactioni

Subunit structurei

Found in association with the 30S subunit of the ribosome.1 Publication

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100017061.

Structurei

Secondary structure

1130
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi10 – 19Combined sources10
Beta strandi22 – 28Combined sources7
Beta strandi31 – 36Combined sources6
Helixi37 – 39Combined sources3
Beta strandi41 – 43Combined sources3
Helixi48 – 50Combined sources3
Beta strandi57 – 66Combined sources10
Turni67 – 70Combined sources4
Beta strandi71 – 76Combined sources6
Helixi77 – 81Combined sources5
Turni90 – 93Combined sources4
Beta strandi105 – 109Combined sources5
Helixi126 – 128Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2K4KNMR-A1-130[»]
ProteinModelPortaliP80870.
SMRiP80870.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP80870.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 77S1 motifPROSITE-ProRule annotationAdd BLAST70

Sequence similaritiesi

Contains 1 S1 motif domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiCOG1098. LUCA.
HOGENOMiHOG000217052.
InParanoidiP80870.
KOiK07570.
OMAiIQADLNK.
PhylomeDBiP80870.

Family and domain databases

InterProiIPR012340. NA-bd_OB-fold.
IPR000110. Ribosomal_S1.
IPR022967. S1_dom.
IPR003029. S1_domain.
[Graphical view]
PfamiPF00575. S1. 1 hit.
[Graphical view]
PRINTSiPR00681. RIBOSOMALS1.
SMARTiSM00316. S1. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50126. S1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P80870-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAKFEVGSV YTGKVTGLQA YGAFVALDEE TQGLVHISEV THGFVKDINE
60 70 80 90 100
HLSVGDEVQV KVLAVDEEKG KISLSIRATQ AAPEKKESKP RKPKAAQVSE
110 120 130
EASTPQGFNT LKDKLEEWIE MSNRKDLIKK
Length:130
Mass (Da):14,283
Last modified:January 23, 2007 - v3
Checksum:iDC047C02873AB4B9
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti30E → W AA sequence (PubMed:9298659).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z93934 Genomic DNA. Translation: CAB07921.1.
AL009126 Genomic DNA. Translation: CAB15128.1.
PIRiH70010.
RefSeqiNP_391017.1. NC_000964.3.
WP_003228864.1. NZ_JNCM01000033.1.

Genome annotation databases

EnsemblBacteriaiCAB15128; CAB15128; BSU31390.
GeneIDi11240747.
938849.
KEGGibsu:BSU31390.
PATRICi18978246. VBIBacSub10457_3286.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z93934 Genomic DNA. Translation: CAB07921.1.
AL009126 Genomic DNA. Translation: CAB15128.1.
PIRiH70010.
RefSeqiNP_391017.1. NC_000964.3.
WP_003228864.1. NZ_JNCM01000033.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2K4KNMR-A1-130[»]
ProteinModelPortaliP80870.
SMRiP80870.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100017061.

Proteomic databases

PaxDbiP80870.
PRIDEiP80870.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB15128; CAB15128; BSU31390.
GeneIDi11240747.
938849.
KEGGibsu:BSU31390.
PATRICi18978246. VBIBacSub10457_3286.

Phylogenomic databases

eggNOGiCOG1098. LUCA.
HOGENOMiHOG000217052.
InParanoidiP80870.
KOiK07570.
OMAiIQADLNK.
PhylomeDBiP80870.

Enzyme and pathway databases

BioCyciBSUB:BSU31390-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP80870.

Family and domain databases

InterProiIPR012340. NA-bd_OB-fold.
IPR000110. Ribosomal_S1.
IPR022967. S1_dom.
IPR003029. S1_domain.
[Graphical view]
PfamiPF00575. S1. 1 hit.
[Graphical view]
PRINTSiPR00681. RIBOSOMALS1.
SMARTiSM00316. S1. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50126. S1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiGS13_BACSU
AccessioniPrimary (citable) accession number: P80870
Secondary accession number(s): O05238
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: January 23, 2007
Last modified: November 2, 2016
This is version 106 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.