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Protein

Pyrogallol hydroxytransferase large subunit

Gene

athL

Organism
Pelobacter acidigallici
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Isomerisation of pyrogallol to phloroglucin.

Catalytic activityi

1,2,3,5-tetrahydroxybenzene + 1,2,3-trihydroxybenzene = 1,3,5-trihydroxybenzene + 1,2,3,5-tetrahydroxybenzene.

Cofactori

Mo-bis(molybdopterin guanine dinucleotide)1 PublicationNote: Binds 1 molybdenum-bis(molybdopterin guanine dinucleotide) (Mo-bis-MGD) cofactor per subunit.1 Publication

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi175Molybdenum1

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Ligandi

Metal-binding, Molybdenum

Enzyme and pathway databases

BRENDAi1.97.1.2. 4585.

Protein family/group databases

TCDBi5.A.3.7.1. the prokaryotic molybdopterin-containing oxidoreductase (pmo) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Pyrogallol hydroxytransferase large subunit (EC:1.97.1.2)
Alternative name(s):
Transhydroxylase subunit alpha
Gene namesi
Name:athL
OrganismiPelobacter acidigallici
Taxonomic identifieri35816 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesDesulfuromonadaceaePelobacter

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00000632422 – 875Pyrogallol hydroxytransferase large subunitAdd BLAST874

Interactioni

Subunit structurei

Heterodimer of a large and a small subunit.1 Publication

Structurei

Secondary structure

1875
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi5 – 9Combined sources5
Beta strandi16 – 21Combined sources6
Beta strandi24 – 29Combined sources6
Turni35 – 37Combined sources3
Beta strandi44 – 46Combined sources3
Beta strandi49 – 51Combined sources3
Helixi61 – 64Combined sources4
Helixi67 – 70Combined sources4
Beta strandi73 – 75Combined sources3
Beta strandi80 – 82Combined sources3
Helixi93 – 95Combined sources3
Helixi98 – 101Combined sources4
Helixi105 – 108Combined sources4
Beta strandi109 – 111Combined sources3
Helixi114 – 131Combined sources18
Helixi134 – 136Combined sources3
Beta strandi137 – 140Combined sources4
Turni149 – 151Combined sources3
Turni153 – 155Combined sources3
Helixi156 – 164Combined sources9
Beta strandi167 – 170Combined sources4
Turni174 – 176Combined sources3
Helixi177 – 181Combined sources5
Helixi183 – 187Combined sources5
Helixi190 – 192Combined sources3
Helixi201 – 208Combined sources8
Beta strandi210 – 216Combined sources7
Helixi219 – 222Combined sources4
Beta strandi224 – 226Combined sources3
Turni228 – 231Combined sources4
Helixi232 – 240Combined sources9
Beta strandi244 – 248Combined sources5
Helixi254 – 259Combined sources6
Beta strandi261 – 264Combined sources4
Helixi271 – 284Combined sources14
Helixi290 – 296Combined sources7
Beta strandi297 – 299Combined sources3
Helixi300 – 307Combined sources8
Turni308 – 312Combined sources5
Helixi318 – 325Combined sources8
Helixi329 – 341Combined sources13
Beta strandi344 – 348Combined sources5
Turni349 – 352Combined sources4
Helixi356 – 358Combined sources3
Helixi363 – 376Combined sources14
Turni377 – 380Combined sources4
Beta strandi389 – 391Combined sources3
Helixi404 – 406Combined sources3
Turni408 – 410Combined sources3
Turni413 – 415Combined sources3
Helixi417 – 419Combined sources3
Helixi422 – 426Combined sources5
Beta strandi429 – 431Combined sources3
Beta strandi438 – 441Combined sources4
Beta strandi446 – 448Combined sources3
Helixi449 – 451Combined sources3
Helixi452 – 458Combined sources7
Beta strandi461 – 464Combined sources4
Helixi475 – 477Combined sources3
Beta strandi479 – 483Combined sources5
Beta strandi492 – 497Combined sources6
Helixi500 – 503Combined sources4
Beta strandi504 – 506Combined sources3
Helixi508 – 513Combined sources6
Beta strandi521 – 529Combined sources9
Helixi533 – 535Combined sources3
Beta strandi537 – 542Combined sources6
Helixi545 – 547Combined sources3
Beta strandi550 – 553Combined sources4
Helixi564 – 567Combined sources4
Beta strandi568 – 570Combined sources3
Beta strandi572 – 576Combined sources5
Helixi589 – 599Combined sources11
Helixi603 – 607Combined sources5
Helixi612 – 621Combined sources10
Helixi625 – 627Combined sources3
Helixi631 – 637Combined sources7
Beta strandi639 – 641Combined sources3
Beta strandi646 – 648Combined sources3
Helixi655 – 658Combined sources4
Helixi672 – 674Combined sources3
Beta strandi686 – 691Combined sources6
Helixi693 – 700Combined sources8
Turni721 – 723Combined sources3
Helixi725 – 728Combined sources4
Beta strandi732 – 735Combined sources4
Beta strandi746 – 749Combined sources4
Helixi753 – 756Combined sources4
Turni758 – 760Combined sources3
Beta strandi761 – 764Combined sources4
Beta strandi767 – 775Combined sources9
Helixi776 – 781Combined sources6
Beta strandi789 – 794Combined sources6
Beta strandi797 – 809Combined sources13
Beta strandi813 – 815Combined sources3
Beta strandi825 – 828Combined sources4
Turni829 – 831Combined sources3
Beta strandi834 – 836Combined sources3
Helixi839 – 841Combined sources3
Beta strandi848 – 851Combined sources4
Beta strandi860 – 866Combined sources7

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V4CX-ray2.35A/C/E/G/I/K/M/O/Q/S/U/W1-875[»]
4V4DX-ray2.20A/C/E/G/I/K/M/O/Q/S/U/W1-875[»]
4V4EX-ray2.00A/C/E/G/I/K/M/O/Q/S/U/W1-875[»]
ProteinModelPortaliP80563.
SMRiP80563.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP80563.

Family & Domainsi

Sequence similaritiesi

Family and domain databases

InterProiIPR009010. Asp_de-COase-like_dom.
IPR006657. MoPterin_dinucl-bd_dom.
IPR006656. Mopterin_OxRdtase.
[Graphical view]
PfamiPF00384. Molybdopterin. 1 hit.
PF01568. Molydop_binding. 1 hit.
[Graphical view]
SUPFAMiSSF50692. SSF50692. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P80563-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGEVVRLTNS STGGPVFVYV KDGKIIRMTP MDFDDAVDAP SWKIEARGKT
60 70 80 90 100
FTPPRKTSIA PYTAGFKSMI YSDLRIPYPM KRKSFDPNGE RNPQLRGAGL
110 120 130 140 150
SKQDPWSDYE RISWDEATDI VVAEINRIKH AYGPSAILST PSSHHMWGNV
160 170 180 190 200
GYRHSTYFRF MNMMGFTYAD HNPDSWEGWH WGGMHMWGFS WRLGNPEQYD
210 220 230 240 250
LLEDGLKHAE MIVFWSSDPE TNSGIYAGFE SNIRRQWLKD LGVDFVFIDP
260 270 280 290 300
HMNHTARLVA DKWFSPKIGT DHALSFAIAY TWLKEDSYDK EYVAANAHGF
310 320 330 340 350
EEWADYVLGK TDGTPKTCEW AEEESGVPAC EIRALARQWA KKNTYLAAGG
360 370 380 390 400
LGGWGGACRA SHGIEWARGM IALATMQGMG KPGSNMWSTT QGVPLDYEFY
410 420 430 440 450
FPGYAEGGIS GDCENSAAGF KFAWRMFDGK TTFPSPSNLN TSAGQHIPRL
460 470 480 490 500
KIPECIMGGK FQWSGKGFAG GDISHQLHQY EYPAPGYSKI KMFWKYGGPH
510 520 530 540 550
LGTMTATNRY AKMYTHDSLE FVVSQSIWFE GEVPFADIIL PACTNFERWD
560 570 580 590 600
ISEFANCSGY IPDNYQLCNH RVISLQAKCI EPVGESMSDY EIYRLFAKKL
610 620 630 640 650
NIEEMFSEGK DELAWCEQYF NATDMPKYMT WDEFFKKGYF VVPDNPNRKK
660 670 680 690 700
TVALRWFAEG REKDTPDWGP RLNNQVCRKG LQTTTGKVEF IATSLKNFEE
710 720 730 740 750
QGYIDEHRPS MHTYVPAWES QKHSPLAVKY PLGMLSPHPR FSMHTMGDGK
760 770 780 790 800
NSYMNYIKDH RVEVDGYKYW IMRVNSIDAE ARGIKNGDLI RAYNDRGSVI
810 820 830 840 850
LAAQVTECLQ PGTVHSYESC AVYDPLGTAG KSADRGGCIN ILTPDRYISK
860 870
YACGMANNTA LVEIEKWDGD KYEIY
Length:875
Mass (Da):99,261
Last modified:January 23, 2007 - v3
Checksum:iB5D7DE5FAEF53A61
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ243850 Genomic DNA. Translation: CAB50913.1.
PIRiS65430.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ243850 Genomic DNA. Translation: CAB50913.1.
PIRiS65430.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V4CX-ray2.35A/C/E/G/I/K/M/O/Q/S/U/W1-875[»]
4V4DX-ray2.20A/C/E/G/I/K/M/O/Q/S/U/W1-875[»]
4V4EX-ray2.00A/C/E/G/I/K/M/O/Q/S/U/W1-875[»]
ProteinModelPortaliP80563.
SMRiP80563.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

TCDBi5.A.3.7.1. the prokaryotic molybdopterin-containing oxidoreductase (pmo) family.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Enzyme and pathway databases

BRENDAi1.97.1.2. 4585.

Miscellaneous databases

EvolutionaryTraceiP80563.

Family and domain databases

InterProiIPR009010. Asp_de-COase-like_dom.
IPR006657. MoPterin_dinucl-bd_dom.
IPR006656. Mopterin_OxRdtase.
[Graphical view]
PfamiPF00384. Molybdopterin. 1 hit.
PF01568. Molydop_binding. 1 hit.
[Graphical view]
SUPFAMiSSF50692. SSF50692. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiPGTL_PELAC
AccessioniPrimary (citable) accession number: P80563
Secondary accession number(s): Q9S354
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: January 23, 2007
Last modified: November 2, 2016
This is version 80 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Direct protein sequencing

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.