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P80381

- RS19_THETH

UniProt

P80381 - RS19_THETH

Protein

30S ribosomal protein S19

Gene

rpsS

Organism
Thermus thermophilus
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.By similarity

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S19
    Gene namesi
    Name:rpsS
    Synonyms:rps19
    OrganismiThermus thermophilus
    Taxonomic identifieri274 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

    Subcellular locationi

    GO - Cellular componenti

    1. small ribosomal subunit Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 939230S ribosomal protein S19PRO_0000129928Add
    BLAST

    Structurei

    Secondary structure

    1
    93
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi13 – 197
    Turni20 – 267
    Beta strandi30 – 323
    Beta strandi36 – 383
    Helixi42 – 443
    Beta strandi48 – 514
    Beta strandi58 – 614
    Turni64 – 685
    Helixi71 – 744

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1QKFNMR-A2-93[»]
    1QKHNMR-A2-93[»]
    1TWTmodel-V2-93[»]
    1VOXX-ray11.50S2-81[»]
    1VOZX-ray11.50S2-81[»]
    4BYBX-ray3.35S1-93[»]
    ProteinModelPortaliP80381.
    SMRiP80381. Positions 2-88.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP80381.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S19P family.Curated

    Family and domain databases

    Gene3Di3.30.860.10. 1 hit.
    HAMAPiMF_00531. Ribosomal_S19.
    InterProiIPR002222. Ribosomal_S19.
    IPR005732. Ribosomal_S19_bac-type.
    IPR020934. Ribosomal_S19_CS.
    IPR023575. Ribosomal_S19_SF.
    [Graphical view]
    PANTHERiPTHR11880. PTHR11880. 1 hit.
    PfamiPF00203. Ribosomal_S19. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002144. Ribosomal_S19. 1 hit.
    PRINTSiPR00975. RIBOSOMALS19.
    SUPFAMiSSF54570. SSF54570. 1 hit.
    TIGRFAMsiTIGR01050. rpsS_bact. 1 hit.
    PROSITEiPS00323. RIBOSOMAL_S19. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P80381-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPRSLKKGVF VDDHLLEKVL ELNAKGEKRL IKTWSRRSTI VPEMVGHTIA   50
    VYNGKQHVPV YITENMVGHK LGEFAPTRTY RGHGKEAKAT KKK 93
    Length:93
    Mass (Da):10,581
    Last modified:January 23, 2007 - v3
    Checksum:iD77C0FC2D4D2DE04
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X84059 Genomic DNA. Translation: CAA58878.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X84059 Genomic DNA. Translation: CAA58878.1 .

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1QKF NMR - A 2-93 [» ]
    1QKH NMR - A 2-93 [» ]
    1TWT model - V 2-93 [» ]
    1VOX X-ray 11.50 S 2-81 [» ]
    1VOZ X-ray 11.50 S 2-81 [» ]
    4BYB X-ray 3.35 S 1-93 [» ]
    ProteinModelPortali P80381.
    SMRi P80381. Positions 2-88.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Miscellaneous databases

    EvolutionaryTracei P80381.

    Family and domain databases

    Gene3Di 3.30.860.10. 1 hit.
    HAMAPi MF_00531. Ribosomal_S19.
    InterProi IPR002222. Ribosomal_S19.
    IPR005732. Ribosomal_S19_bac-type.
    IPR020934. Ribosomal_S19_CS.
    IPR023575. Ribosomal_S19_SF.
    [Graphical view ]
    PANTHERi PTHR11880. PTHR11880. 1 hit.
    Pfami PF00203. Ribosomal_S19. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002144. Ribosomal_S19. 1 hit.
    PRINTSi PR00975. RIBOSOMALS19.
    SUPFAMi SSF54570. SSF54570. 1 hit.
    TIGRFAMsi TIGR01050. rpsS_bact. 1 hit.
    PROSITEi PS00323. RIBOSOMAL_S19. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Preliminary NMR studies of Thermus thermophilus ribosomal protein S19 overproduced in Escherichia coli."
      Davydova N.L., Rak A.V., Gryaznova O.I., Liljas A., Jonsson B.-H., Berglund H., Haerd T., Garber M.B.
      FEBS Lett. 415:155-159(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], STRUCTURE BY NMR.
      Strain: VK1.
    2. "Solution structure of the ribosomal protein S19 from Thermus thermophilus."
      Helgstrand M., Rak A.V., Allard P., Davydova N., Garber M.B., Haerd T.
      J. Mol. Biol. 292:1071-1081(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY NMR.
      Strain: VK1.

    Entry informationi

    Entry nameiRS19_THETH
    AccessioniPrimary (citable) accession number: P80381
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1995
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 93 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3