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P80381 (RS19_THETH) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 92. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S19
Gene names
Name:rpsS
Synonyms:rps19
OrganismThermus thermophilus
Taxonomic identifier274 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Protein attributes

Sequence length93 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA By similarity. HAMAP-Rule MF_00531

Sequence similarities

Belongs to the ribosomal protein S19P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical term3D-structure
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentsmall ribosomal subunit

Inferred from electronic annotation. Source: InterPro

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed By similarity
Chain2 – 939230S ribosomal protein S19 HAMAP-Rule MF_00531
PRO_0000129928

Secondary structure

.................. 93
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P80381 [UniParc].

Last modified January 23, 2007. Version 3.
Checksum: D77C0FC2D4D2DE04

FASTA9310,581
        10         20         30         40         50         60 
MPRSLKKGVF VDDHLLEKVL ELNAKGEKRL IKTWSRRSTI VPEMVGHTIA VYNGKQHVPV 

        70         80         90 
YITENMVGHK LGEFAPTRTY RGHGKEAKAT KKK 

« Hide

References

[1]"Preliminary NMR studies of Thermus thermophilus ribosomal protein S19 overproduced in Escherichia coli."
Davydova N.L., Rak A.V., Gryaznova O.I., Liljas A., Jonsson B.-H., Berglund H., Haerd T., Garber M.B.
FEBS Lett. 415:155-159(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], STRUCTURE BY NMR.
Strain: VK1.
[2]"Solution structure of the ribosomal protein S19 from Thermus thermophilus."
Helgstrand M., Rak A.V., Allard P., Davydova N., Garber M.B., Haerd T.
J. Mol. Biol. 292:1071-1081(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: STRUCTURE BY NMR.
Strain: VK1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X84059 Genomic DNA. Translation: CAA58878.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1QKFNMR-A2-93[»]
1QKHNMR-A2-93[»]
1TWTmodel-V2-93[»]
1VOXX-ray11.50S2-81[»]
1VOZX-ray11.50S2-81[»]
4BYBX-ray3.35S1-93[»]
ProteinModelPortalP80381.
SMRP80381. Positions 2-88.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D3.30.860.10. 1 hit.
HAMAPMF_00531. Ribosomal_S19.
InterProIPR002222. Ribosomal_S19.
IPR005732. Ribosomal_S19_bac-type.
IPR020934. Ribosomal_S19_CS.
IPR023575. Ribosomal_S19_SF.
[Graphical view]
PANTHERPTHR11880. PTHR11880. 1 hit.
PfamPF00203. Ribosomal_S19. 1 hit.
[Graphical view]
PIRSFPIRSF002144. Ribosomal_S19. 1 hit.
PRINTSPR00975. RIBOSOMALS19.
SUPFAMSSF54570. SSF54570. 1 hit.
TIGRFAMsTIGR01050. rpsS_bact. 1 hit.
PROSITEPS00323. RIBOSOMAL_S19. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceP80381.

Entry information

Entry nameRS19_THETH
AccessionPrimary (citable) accession number: P80381
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: January 23, 2007
Last modified: February 19, 2014
This is version 92 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references