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Protein

30S ribosomal protein S19

Gene

rpsS

Organism
Thermus thermophilus
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S19
Gene namesi
Name:rpsS
Synonyms:rps19
OrganismiThermus thermophilus
Taxonomic identifieri274 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00001299282 – 9330S ribosomal protein S19Add BLAST92

Structurei

Secondary structure

193
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi13 – 25Combined sources13
Beta strandi30 – 32Combined sources3
Beta strandi35 – 37Combined sources3
Helixi42 – 44Combined sources3
Beta strandi47 – 52Combined sources6
Beta strandi57 – 62Combined sources6
Turni64 – 68Combined sources5
Beta strandi69 – 71Combined sources3
Turni72 – 74Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1QKFNMR-A2-93[»]
1QKHNMR-A2-93[»]
1TWTmodel-V2-93[»]
4V4GX-ray11.50S2-81[»]
4V8XX-ray3.35AS/CS1-93[»]
ProteinModelPortaliP80381.
SMRiP80381.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP80381.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105K7S. Bacteria.
COG0185. LUCA.

Family and domain databases

Gene3Di3.30.860.10. 1 hit.
HAMAPiMF_00531. Ribosomal_S19. 1 hit.
InterProiView protein in InterPro
IPR002222. Ribosomal_S19.
IPR005732. Ribosomal_S19_bac-type.
IPR020934. Ribosomal_S19_CS.
IPR023575. Ribosomal_S19_SF.
PANTHERiPTHR11880. PTHR11880. 1 hit.
PfamiView protein in Pfam
PF00203. Ribosomal_S19. 1 hit.
PIRSFiPIRSF002144. Ribosomal_S19. 1 hit.
PRINTSiPR00975. RIBOSOMALS19.
SUPFAMiSSF54570. SSF54570. 1 hit.
TIGRFAMsiTIGR01050. rpsS_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00323. RIBOSOMAL_S19. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P80381-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPRSLKKGVF VDDHLLEKVL ELNAKGEKRL IKTWSRRSTI VPEMVGHTIA
60 70 80 90
VYNGKQHVPV YITENMVGHK LGEFAPTRTY RGHGKEAKAT KKK
Length:93
Mass (Da):10,581
Last modified:January 23, 2007 - v3
Checksum:iD77C0FC2D4D2DE04
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X84059 Genomic DNA. Translation: CAA58878.1.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRS19_THETH
AccessioniPrimary (citable) accession number: P80381
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: January 23, 2007
Last modified: July 5, 2017
This is version 106 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families