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P80380

- RS20_THET8

UniProt

P80380 - RS20_THET8

Protein

30S ribosomal protein S20

Gene

rpsT

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at protein leveli
  1. Functioni

    One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the bottom of the body of the 30S subunit, by binding to several RNA helices of the 16S rRNA.

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciTTHE300852:GH8R-1433-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S20
    Gene namesi
    Name:rpsT
    Synonyms:rps20
    Ordered Locus Names:TTHA1397
    OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
    Taxonomic identifieri300852 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000532: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11Removed1 Publication
    Chaini2 – 10610530S ribosomal protein S20PRO_0000168050Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 30S ribosomal subunit.

    Protein-protein interaction databases

    STRINGi300852.TTHA1397.

    Structurei

    Secondary structure

    1
    106
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Helixi12 – 4635
    Helixi49 – 6820
    Beta strandi69 – 724
    Helixi74 – 9219
    Turni93 – 964
    Beta strandi102 – 1043

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1FJGX-ray3.00T1-106[»]
    1GIXX-ray5.50W1-106[»]
    1HNWX-ray3.40T1-106[»]
    1HNXX-ray3.40T1-106[»]
    1HNZX-ray3.30T1-106[»]
    1HR0X-ray3.20T1-106[»]
    1I94X-ray3.20T2-106[»]
    1I95X-ray4.50T2-106[»]
    1I96X-ray4.20T2-106[»]
    1I97X-ray4.50T2-106[»]
    1IBKX-ray3.31T1-106[»]
    1IBLX-ray3.11T1-106[»]
    1IBMX-ray3.31T1-106[»]
    1J5EX-ray3.05T1-106[»]
    1JGOX-ray5.60W1-106[»]
    1JGPX-ray7.00W1-106[»]
    1JGQX-ray5.00W1-106[»]
    1L1Umodel-T8-106[»]
    1ML5electron microscopy14.00W1-106[»]
    1N32X-ray3.00T1-106[»]
    1N33X-ray3.35T1-106[»]
    1N34X-ray3.80T1-106[»]
    1N36X-ray3.65T1-106[»]
    1PNSX-ray8.70T8-106[»]
    1PNXX-ray9.50T8-106[»]
    1XMOX-ray3.25T1-106[»]
    1XMQX-ray3.00T1-106[»]
    1XNQX-ray3.05T1-106[»]
    1XNRX-ray3.10T1-106[»]
    1YL4X-ray5.50W1-106[»]
    2B64X-ray5.90T1-106[»]
    2B9MX-ray6.76T1-106[»]
    2B9OX-ray6.46T1-106[»]
    2E5LX-ray3.30T2-106[»]
    2F4VX-ray3.80T1-106[»]
    2HGIX-ray5.00W1-106[»]
    2HGPX-ray5.50W1-106[»]
    2HGRX-ray4.51W1-106[»]
    2HHHX-ray3.35T1-106[»]
    2J00X-ray2.80T2-106[»]
    2J02X-ray2.80T2-106[»]
    2OW8X-ray3.71u1-106[»]
    2UU9X-ray3.10T2-106[»]
    2UUAX-ray2.90T2-106[»]
    2UUBX-ray2.80T2-106[»]
    2UUCX-ray3.10T2-106[»]
    2V46X-ray3.50T2-106[»]
    2V48X-ray3.50T2-106[»]
    2WDGX-ray3.30T1-106[»]
    2WDHX-ray3.30T1-106[»]
    2WDKX-ray3.50T1-106[»]
    2WDMX-ray3.50T1-106[»]
    2WH1X-ray3.45T1-106[»]
    2WH3X-ray3.45T1-106[»]
    2WRIX-ray3.60T1-106[»]
    2WRKX-ray3.60T1-106[»]
    2WRNX-ray3.60T1-106[»]
    2WRQX-ray3.60T1-106[»]
    2X9RX-ray3.10T1-106[»]
    2X9TX-ray3.10T1-106[»]
    2XFZX-ray3.20T1-106[»]
    2XG1X-ray3.20T1-106[»]
    2XQDX-ray3.10T1-106[»]
    2XSYelectron microscopy7.80T1-106[»]
    2XUYelectron microscopy7.60T1-106[»]
    2Y0UX-ray3.10T1-106[»]
    2Y0WX-ray3.10T1-106[»]
    2Y0YX-ray3.10T1-106[»]
    2Y10X-ray3.10T1-106[»]
    2Y12X-ray3.10T1-106[»]
    2Y14X-ray3.10T1-106[»]
    2Y16X-ray3.10T1-106[»]
    2Y18X-ray3.10T1-106[»]
    2ZM6X-ray3.30T2-106[»]
    3FICelectron microscopy6.40T8-106[»]
    3HUWX-ray3.10T1-106[»]
    3HUYX-ray3.10T1-106[»]
    3I8GX-ray3.10W1-106[»]
    3I8HX-ray3.10W1-106[»]
    3I9BX-ray3.50W1-106[»]
    3I9DX-ray3.50W1-106[»]
    3KIQX-ray3.30t1-106[»]
    3KISX-ray3.30t1-106[»]
    3KIUX-ray3.60t1-106[»]
    3KIXX-ray3.60t1-106[»]
    3KNHX-ray3.00T1-106[»]
    3KNJX-ray3.15T1-106[»]
    3KNLX-ray3.45T1-106[»]
    3KNNX-ray3.45T1-106[»]
    3OGEX-ray3.00T1-106[»]
    3OGYX-ray3.00T1-106[»]
    3OHCX-ray3.00T1-106[»]
    3OHDX-ray3.00T1-106[»]
    3OHYX-ray3.00T1-106[»]
    3OI0X-ray3.00T1-106[»]
    3OI2X-ray3.10T1-106[»]
    3OI4X-ray3.10T1-106[»]
    3OTOX-ray3.69T1-106[»]
    3TVFX-ray3.10W1-106[»]
    3TVGX-ray3.10W1-106[»]
    3UXSX-ray3.20T1-106[»]
    3UXTX-ray3.20T1-106[»]
    3UYDX-ray3.00W1-106[»]
    3UYFX-ray3.00W1-106[»]
    3UZ3X-ray3.30W1-106[»]
    3UZ4X-ray3.30W1-106[»]
    3UZ6X-ray3.00W1-106[»]
    3UZ7X-ray3.00W1-106[»]
    3UZGX-ray3.30W1-106[»]
    3UZIX-ray3.30W1-106[»]
    3UZLX-ray3.30W1-106[»]
    3UZMX-ray3.30W1-106[»]
    3V22X-ray3.00T1-106[»]
    3V24X-ray3.00T1-106[»]
    3V26X-ray3.10T1-106[»]
    3V28X-ray3.10T1-106[»]
    3V2CX-ray2.70T1-106[»]
    3V2EX-ray2.70T1-106[»]
    3V6UX-ray3.90T1-106[»]
    3V6VX-ray3.90T1-106[»]
    3ZN7X-ray3.10T1-106[»]
    3ZNDX-ray3.10T1-106[»]
    3ZVOX-ray3.80T1-106[»]
    4ABRX-ray3.10T1-106[»]
    4AQYX-ray3.50T1-106[»]
    4B3MX-ray2.90T1-106[»]
    4B3RX-ray3.00T1-106[»]
    4B3SX-ray3.15T1-106[»]
    4B3TX-ray3.00T1-106[»]
    4B8FX-ray3.70T1-106[»]
    4B8HX-ray3.70T1-106[»]
    4BYBX-ray3.35T1-106[»]
    4BYDX-ray3.35T1-106[»]
    4CR1X-ray2.95T1-106[»]
    4DH9X-ray3.20T1-106[»]
    4DHBX-ray3.20T1-106[»]
    4DR1X-ray3.60T1-106[»]
    4DR2X-ray3.25T1-106[»]
    4DR3X-ray3.35T1-106[»]
    4DR4X-ray3.97T1-106[»]
    4DR5X-ray3.45T1-106[»]
    4DR6X-ray3.30T1-106[»]
    4DR7X-ray3.75T1-106[»]
    4DUYX-ray3.39T1-106[»]
    4DUZX-ray3.65T1-106[»]
    4DV0X-ray3.85T1-106[»]
    4DV1X-ray3.85T1-106[»]
    4DV2X-ray3.65T1-106[»]
    4DV3X-ray3.55T1-106[»]
    4DV4X-ray3.65T1-106[»]
    4DV5X-ray3.68T1-106[»]
    4DV6X-ray3.30T1-106[»]
    4DV7X-ray3.29T1-106[»]
    4EJ9X-ray3.52T1-106[»]
    4EJAX-ray3.52T1-106[»]
    4G5KX-ray3.30W1-106[»]
    4G5MX-ray3.30W1-106[»]
    4G5TX-ray3.10W1-106[»]
    4G5VX-ray3.10W1-106[»]
    4GKJX-ray3.30T8-106[»]
    4GKKX-ray3.20T8-106[»]
    4JI0X-ray3.49T1-106[»]
    4JI1X-ray3.14T1-106[»]
    4JI2X-ray3.64T1-106[»]
    4JI3X-ray3.35T1-106[»]
    4JI4X-ray3.69T1-106[»]
    4JI5X-ray3.85T1-106[»]
    4JI6X-ray3.55T1-106[»]
    4JI7X-ray3.50T1-106[»]
    4JI8X-ray3.74T1-106[»]
    4JUWX-ray2.86T8-106[»]
    4JV5X-ray3.16T8-106[»]
    4JYAX-ray3.10T8-106[»]
    4K0KX-ray3.40T8-106[»]
    4K0LX-ray3.30T8-106[»]
    4K0PX-ray3.30T8-106[»]
    4KHPX-ray3.10T8-106[»]
    4NVUX-ray3.00T1-106[»]
    4NVWX-ray3.00T1-106[»]
    4NVYX-ray3.10T1-106[»]
    4NW0X-ray3.10T1-106[»]
    4NXMX-ray3.65T1-106[»]
    4NXNX-ray3.54T1-106[»]
    4OX9X-ray3.80T1-106[»]
    ProteinModelPortaliP80380.
    SMRiP80380. Positions 8-106.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP80380.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S20P family.Curated

    Phylogenomic databases

    eggNOGiCOG0268.
    HOGENOMiHOG000097049.
    KOiK02968.
    OMAiRNKQNEK.
    OrthoDBiEOG6HMXNQ.
    PhylomeDBiP80380.

    Family and domain databases

    Gene3Di1.20.58.110. 1 hit.
    HAMAPiMF_00500. Ribosomal_S20.
    InterProiIPR002583. Ribosomal_S20.
    [Graphical view]
    PfamiPF01649. Ribosomal_S20p. 1 hit.
    [Graphical view]
    ProDomiPD004231. Ribosomal_S20. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF46992. SSF46992. 1 hit.
    TIGRFAMsiTIGR00029. S20. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P80380-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAQKKPKRNL SALKRHRQSL KRRLRNKAKK SAIKTLSKKA IQLAQEGKAE    50
    EALKIMRKAE SLIDKAAKGS TLHKNAAARR KSRLMRKVRQ LLEAAGAPLI 100
    GGGLSA 106
    Length:106
    Mass (Da):11,703
    Last modified:January 23, 2007 - v3
    Checksum:iBEFD49F34F71F5E8
    GO

    Mass spectrometryi

    Molecular mass is 11572 Da from positions 2 - 106. Determined by MALDI. 1 Publication

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ295159 Genomic DNA. Translation: CAC15067.1.
    AP008226 Genomic DNA. Translation: BAD71220.1.
    RefSeqiWP_011228650.1. NC_006461.1.
    YP_144663.1. NC_006461.1.

    Genome annotation databases

    EnsemblBacteriaiBAD71220; BAD71220; BAD71220.
    GeneIDi3168087.
    KEGGittj:TTHA1397.
    PATRICi23957751. VBITheThe93045_1371.

    Cross-referencesi

    Web resourcesi

    T.thermophilus ribosome structure and function

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ295159 Genomic DNA. Translation: CAC15067.1 .
    AP008226 Genomic DNA. Translation: BAD71220.1 .
    RefSeqi WP_011228650.1. NC_006461.1.
    YP_144663.1. NC_006461.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1FJG X-ray 3.00 T 1-106 [» ]
    1GIX X-ray 5.50 W 1-106 [» ]
    1HNW X-ray 3.40 T 1-106 [» ]
    1HNX X-ray 3.40 T 1-106 [» ]
    1HNZ X-ray 3.30 T 1-106 [» ]
    1HR0 X-ray 3.20 T 1-106 [» ]
    1I94 X-ray 3.20 T 2-106 [» ]
    1I95 X-ray 4.50 T 2-106 [» ]
    1I96 X-ray 4.20 T 2-106 [» ]
    1I97 X-ray 4.50 T 2-106 [» ]
    1IBK X-ray 3.31 T 1-106 [» ]
    1IBL X-ray 3.11 T 1-106 [» ]
    1IBM X-ray 3.31 T 1-106 [» ]
    1J5E X-ray 3.05 T 1-106 [» ]
    1JGO X-ray 5.60 W 1-106 [» ]
    1JGP X-ray 7.00 W 1-106 [» ]
    1JGQ X-ray 5.00 W 1-106 [» ]
    1L1U model - T 8-106 [» ]
    1ML5 electron microscopy 14.00 W 1-106 [» ]
    1N32 X-ray 3.00 T 1-106 [» ]
    1N33 X-ray 3.35 T 1-106 [» ]
    1N34 X-ray 3.80 T 1-106 [» ]
    1N36 X-ray 3.65 T 1-106 [» ]
    1PNS X-ray 8.70 T 8-106 [» ]
    1PNX X-ray 9.50 T 8-106 [» ]
    1XMO X-ray 3.25 T 1-106 [» ]
    1XMQ X-ray 3.00 T 1-106 [» ]
    1XNQ X-ray 3.05 T 1-106 [» ]
    1XNR X-ray 3.10 T 1-106 [» ]
    1YL4 X-ray 5.50 W 1-106 [» ]
    2B64 X-ray 5.90 T 1-106 [» ]
    2B9M X-ray 6.76 T 1-106 [» ]
    2B9O X-ray 6.46 T 1-106 [» ]
    2E5L X-ray 3.30 T 2-106 [» ]
    2F4V X-ray 3.80 T 1-106 [» ]
    2HGI X-ray 5.00 W 1-106 [» ]
    2HGP X-ray 5.50 W 1-106 [» ]
    2HGR X-ray 4.51 W 1-106 [» ]
    2HHH X-ray 3.35 T 1-106 [» ]
    2J00 X-ray 2.80 T 2-106 [» ]
    2J02 X-ray 2.80 T 2-106 [» ]
    2OW8 X-ray 3.71 u 1-106 [» ]
    2UU9 X-ray 3.10 T 2-106 [» ]
    2UUA X-ray 2.90 T 2-106 [» ]
    2UUB X-ray 2.80 T 2-106 [» ]
    2UUC X-ray 3.10 T 2-106 [» ]
    2V46 X-ray 3.50 T 2-106 [» ]
    2V48 X-ray 3.50 T 2-106 [» ]
    2WDG X-ray 3.30 T 1-106 [» ]
    2WDH X-ray 3.30 T 1-106 [» ]
    2WDK X-ray 3.50 T 1-106 [» ]
    2WDM X-ray 3.50 T 1-106 [» ]
    2WH1 X-ray 3.45 T 1-106 [» ]
    2WH3 X-ray 3.45 T 1-106 [» ]
    2WRI X-ray 3.60 T 1-106 [» ]
    2WRK X-ray 3.60 T 1-106 [» ]
    2WRN X-ray 3.60 T 1-106 [» ]
    2WRQ X-ray 3.60 T 1-106 [» ]
    2X9R X-ray 3.10 T 1-106 [» ]
    2X9T X-ray 3.10 T 1-106 [» ]
    2XFZ X-ray 3.20 T 1-106 [» ]
    2XG1 X-ray 3.20 T 1-106 [» ]
    2XQD X-ray 3.10 T 1-106 [» ]
    2XSY electron microscopy 7.80 T 1-106 [» ]
    2XUY electron microscopy 7.60 T 1-106 [» ]
    2Y0U X-ray 3.10 T 1-106 [» ]
    2Y0W X-ray 3.10 T 1-106 [» ]
    2Y0Y X-ray 3.10 T 1-106 [» ]
    2Y10 X-ray 3.10 T 1-106 [» ]
    2Y12 X-ray 3.10 T 1-106 [» ]
    2Y14 X-ray 3.10 T 1-106 [» ]
    2Y16 X-ray 3.10 T 1-106 [» ]
    2Y18 X-ray 3.10 T 1-106 [» ]
    2ZM6 X-ray 3.30 T 2-106 [» ]
    3FIC electron microscopy 6.40 T 8-106 [» ]
    3HUW X-ray 3.10 T 1-106 [» ]
    3HUY X-ray 3.10 T 1-106 [» ]
    3I8G X-ray 3.10 W 1-106 [» ]
    3I8H X-ray 3.10 W 1-106 [» ]
    3I9B X-ray 3.50 W 1-106 [» ]
    3I9D X-ray 3.50 W 1-106 [» ]
    3KIQ X-ray 3.30 t 1-106 [» ]
    3KIS X-ray 3.30 t 1-106 [» ]
    3KIU X-ray 3.60 t 1-106 [» ]
    3KIX X-ray 3.60 t 1-106 [» ]
    3KNH X-ray 3.00 T 1-106 [» ]
    3KNJ X-ray 3.15 T 1-106 [» ]
    3KNL X-ray 3.45 T 1-106 [» ]
    3KNN X-ray 3.45 T 1-106 [» ]
    3OGE X-ray 3.00 T 1-106 [» ]
    3OGY X-ray 3.00 T 1-106 [» ]
    3OHC X-ray 3.00 T 1-106 [» ]
    3OHD X-ray 3.00 T 1-106 [» ]
    3OHY X-ray 3.00 T 1-106 [» ]
    3OI0 X-ray 3.00 T 1-106 [» ]
    3OI2 X-ray 3.10 T 1-106 [» ]
    3OI4 X-ray 3.10 T 1-106 [» ]
    3OTO X-ray 3.69 T 1-106 [» ]
    3TVF X-ray 3.10 W 1-106 [» ]
    3TVG X-ray 3.10 W 1-106 [» ]
    3UXS X-ray 3.20 T 1-106 [» ]
    3UXT X-ray 3.20 T 1-106 [» ]
    3UYD X-ray 3.00 W 1-106 [» ]
    3UYF X-ray 3.00 W 1-106 [» ]
    3UZ3 X-ray 3.30 W 1-106 [» ]
    3UZ4 X-ray 3.30 W 1-106 [» ]
    3UZ6 X-ray 3.00 W 1-106 [» ]
    3UZ7 X-ray 3.00 W 1-106 [» ]
    3UZG X-ray 3.30 W 1-106 [» ]
    3UZI X-ray 3.30 W 1-106 [» ]
    3UZL X-ray 3.30 W 1-106 [» ]
    3UZM X-ray 3.30 W 1-106 [» ]
    3V22 X-ray 3.00 T 1-106 [» ]
    3V24 X-ray 3.00 T 1-106 [» ]
    3V26 X-ray 3.10 T 1-106 [» ]
    3V28 X-ray 3.10 T 1-106 [» ]
    3V2C X-ray 2.70 T 1-106 [» ]
    3V2E X-ray 2.70 T 1-106 [» ]
    3V6U X-ray 3.90 T 1-106 [» ]
    3V6V X-ray 3.90 T 1-106 [» ]
    3ZN7 X-ray 3.10 T 1-106 [» ]
    3ZND X-ray 3.10 T 1-106 [» ]
    3ZVO X-ray 3.80 T 1-106 [» ]
    4ABR X-ray 3.10 T 1-106 [» ]
    4AQY X-ray 3.50 T 1-106 [» ]
    4B3M X-ray 2.90 T 1-106 [» ]
    4B3R X-ray 3.00 T 1-106 [» ]
    4B3S X-ray 3.15 T 1-106 [» ]
    4B3T X-ray 3.00 T 1-106 [» ]
    4B8F X-ray 3.70 T 1-106 [» ]
    4B8H X-ray 3.70 T 1-106 [» ]
    4BYB X-ray 3.35 T 1-106 [» ]
    4BYD X-ray 3.35 T 1-106 [» ]
    4CR1 X-ray 2.95 T 1-106 [» ]
    4DH9 X-ray 3.20 T 1-106 [» ]
    4DHB X-ray 3.20 T 1-106 [» ]
    4DR1 X-ray 3.60 T 1-106 [» ]
    4DR2 X-ray 3.25 T 1-106 [» ]
    4DR3 X-ray 3.35 T 1-106 [» ]
    4DR4 X-ray 3.97 T 1-106 [» ]
    4DR5 X-ray 3.45 T 1-106 [» ]
    4DR6 X-ray 3.30 T 1-106 [» ]
    4DR7 X-ray 3.75 T 1-106 [» ]
    4DUY X-ray 3.39 T 1-106 [» ]
    4DUZ X-ray 3.65 T 1-106 [» ]
    4DV0 X-ray 3.85 T 1-106 [» ]
    4DV1 X-ray 3.85 T 1-106 [» ]
    4DV2 X-ray 3.65 T 1-106 [» ]
    4DV3 X-ray 3.55 T 1-106 [» ]
    4DV4 X-ray 3.65 T 1-106 [» ]
    4DV5 X-ray 3.68 T 1-106 [» ]
    4DV6 X-ray 3.30 T 1-106 [» ]
    4DV7 X-ray 3.29 T 1-106 [» ]
    4EJ9 X-ray 3.52 T 1-106 [» ]
    4EJA X-ray 3.52 T 1-106 [» ]
    4G5K X-ray 3.30 W 1-106 [» ]
    4G5M X-ray 3.30 W 1-106 [» ]
    4G5T X-ray 3.10 W 1-106 [» ]
    4G5V X-ray 3.10 W 1-106 [» ]
    4GKJ X-ray 3.30 T 8-106 [» ]
    4GKK X-ray 3.20 T 8-106 [» ]
    4JI0 X-ray 3.49 T 1-106 [» ]
    4JI1 X-ray 3.14 T 1-106 [» ]
    4JI2 X-ray 3.64 T 1-106 [» ]
    4JI3 X-ray 3.35 T 1-106 [» ]
    4JI4 X-ray 3.69 T 1-106 [» ]
    4JI5 X-ray 3.85 T 1-106 [» ]
    4JI6 X-ray 3.55 T 1-106 [» ]
    4JI7 X-ray 3.50 T 1-106 [» ]
    4JI8 X-ray 3.74 T 1-106 [» ]
    4JUW X-ray 2.86 T 8-106 [» ]
    4JV5 X-ray 3.16 T 8-106 [» ]
    4JYA X-ray 3.10 T 8-106 [» ]
    4K0K X-ray 3.40 T 8-106 [» ]
    4K0L X-ray 3.30 T 8-106 [» ]
    4K0P X-ray 3.30 T 8-106 [» ]
    4KHP X-ray 3.10 T 8-106 [» ]
    4NVU X-ray 3.00 T 1-106 [» ]
    4NVW X-ray 3.00 T 1-106 [» ]
    4NVY X-ray 3.10 T 1-106 [» ]
    4NW0 X-ray 3.10 T 1-106 [» ]
    4NXM X-ray 3.65 T 1-106 [» ]
    4NXN X-ray 3.54 T 1-106 [» ]
    4OX9 X-ray 3.80 T 1-106 [» ]
    ProteinModelPortali P80380.
    SMRi P80380. Positions 8-106.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 300852.TTHA1397.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAD71220 ; BAD71220 ; BAD71220 .
    GeneIDi 3168087.
    KEGGi ttj:TTHA1397.
    PATRICi 23957751. VBITheThe93045_1371.

    Phylogenomic databases

    eggNOGi COG0268.
    HOGENOMi HOG000097049.
    KOi K02968.
    OMAi RNKQNEK.
    OrthoDBi EOG6HMXNQ.
    PhylomeDBi P80380.

    Enzyme and pathway databases

    BioCyci TTHE300852:GH8R-1433-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei P80380.

    Family and domain databases

    Gene3Di 1.20.58.110. 1 hit.
    HAMAPi MF_00500. Ribosomal_S20.
    InterProi IPR002583. Ribosomal_S20.
    [Graphical view ]
    Pfami PF01649. Ribosomal_S20p. 1 hit.
    [Graphical view ]
    ProDomi PD004231. Ribosomal_S20. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF46992. SSF46992. 1 hit.
    TIGRFAMsi TIGR00029. S20. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "On the characterization of the putative S20-thx operon of Thermus thermophilus."
      Leontiadou F., Triantafillidou D., Choli-Papadopoulou T.
      Biol. Chem. 382:1001-1006(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Complete genome sequence of Thermus thermophilus HB8."
      Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.
      Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB8 / ATCC 27634 / DSM 579.
    3. "Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus."
      Tsiboli P., Herfurth E., Choli T.
      Eur. J. Biochem. 226:169-177(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: PROTEIN SEQUENCE OF 2-33.
    4. "Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry."
      Suh M.-J., Hamburg D.M., Gregory S.T., Dahlberg A.E., Limbach P.A.
      Proteomics 5:4818-4831(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: MASS SPECTROMETRY.
    5. "Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution."
      Clemons W.M. Jr., May J.L.C., Wimberly B.T., McCutcheon J.P., Capel M.S., Ramakrishnan V.
      Nature 400:833-840(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE 30S SUBUNIT.
    6. Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.
    7. "Structure of functionally activated small ribosomal subunit at 3.3 A resolution."
      Schluenzen F., Tocilj A., Zarivach R., Harms J., Gluehmann M., Janell D., Bashan A., Bartels H., Agmon I., Franceschi F., Yonath A.
      Cell 102:615-623(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
    8. "The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit."
      Brodersen D.E., Clemons W.M. Jr., Carter A.P., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
      Cell 103:1143-1154(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
    9. "Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics."
      Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
      Nature 407:340-348(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.0 ANGSTROMS) OF THE 30S SUBUNIT.
    10. "The path of messenger RNA through the ribosome."
      Yusupova G.Z., Yusupov M.M., Cate J.H.D., Noller H.F.
      Cell 106:233-241(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (5.0 ANGSTROMS) OF THE RIBOSOME.
    11. "Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3."
      Pioletti M., Schluenzen F., Harms J., Zarivach R., Gluehmann M., Avila H., Bashan A., Bartels H., Auerbach T., Jacobi C., Hartsch T., Yonath A., Franceschi F.
      EMBO J. 20:1829-1839(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
    12. "Crystal structure of an initiation factor bound to the 30S ribosomal subunit."
      Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Hartsch T., Wimberly B.T., Ramakrishnan V.
      Science 291:498-501(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
    13. Cited for: X-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE RIBOSOME.
    14. "Recognition of cognate transfer RNA by the 30S ribosomal subunit."
      Ogle J.M., Brodersen D.E., Clemons W.M. Jr., Tarry M.J., Carter A.P., Ramakrishnan V.
      Science 292:897-902(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.11 ANGSTROMS) OF THE 30S SUBUNIT.
    15. "Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA."
      Brodersen D.E., Clemons W.M. Jr., Carter A.P., Wimberly B.T., Ramakrishnan V.
      J. Mol. Biol. 316:725-768(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.

    Entry informationi

    Entry nameiRS20_THET8
    AccessioniPrimary (citable) accession number: P80380
    Secondary accession number(s): Q5SIH2, Q9F2A9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1995
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 129 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3