Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

P80379

- RS16_THETH

UniProt

P80379 - RS16_THETH

Protein

30S ribosomal protein S16

Gene

rpsP

Organism
Thermus thermophilus
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Binds to the lower part of the body of the 30S subunit, where it stabilizes two of its domains.

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-KW
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S16UniRule annotation
    Gene namesi
    Name:rpsPUniRule annotation
    Synonyms:rps16UniRule annotation
    OrganismiThermus thermophilus
    Taxonomic identifieri274 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 919130S ribosomal protein S16PRO_0000167270Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 30S ribosomal subunit.

    Structurei

    Secondary structure

    1
    91
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi3 – 86
    Beta strandi11 – 133
    Beta strandi20 – 256
    Beta strandi30 – 323
    Beta strandi36 – 427
    Beta strandi46 – 494
    Helixi56 – 649

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1EMWNMR-A1-70[»]
    1TWTmodel-S1-91[»]
    ProteinModelPortaliP80379.
    SMRiP80379. Positions 1-91.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP80379.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S16P family.UniRule annotation

    Family and domain databases

    Gene3Di3.30.1320.10. 1 hit.
    HAMAPiMF_00385. Ribosomal_S16.
    InterProiIPR000307. Ribosomal_S16.
    IPR023803. Ribosomal_S16_dom.
    [Graphical view]
    PANTHERiPTHR12919. PTHR12919. 1 hit.
    PfamiPF00886. Ribosomal_S16. 1 hit.
    [Graphical view]
    SUPFAMiSSF54565. SSF54565. 1 hit.
    TIGRFAMsiTIGR00002. S16. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P80379-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVKIRLARFG SKHNPHYPHY RIVVTDARRK RDGKYIEKIG YYDPRKTTPD   50
    WLKVDVERAR YWLSVGAQPT DTARRLLRQA GVFRQEAREG A 91
    Length:91
    Mass (Da):10,784
    Last modified:April 26, 2005 - v3
    Checksum:i66019D66F0DC3FC0
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti18 – 203Missing(PubMed:10997906)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ224859 Genomic DNA. Translation: CAC21226.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ224859 Genomic DNA. Translation: CAC21226.1 .

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1EMW NMR - A 1-70 [» ]
    1TWT model - S 1-91 [» ]
    ProteinModelPortali P80379.
    SMRi P80379. Positions 1-91.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Miscellaneous databases

    EvolutionaryTracei P80379.

    Family and domain databases

    Gene3Di 3.30.1320.10. 1 hit.
    HAMAPi MF_00385. Ribosomal_S16.
    InterProi IPR000307. Ribosomal_S16.
    IPR023803. Ribosomal_S16_dom.
    [Graphical view ]
    PANTHERi PTHR12919. PTHR12919. 1 hit.
    Pfami PF00886. Ribosomal_S16. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54565. SSF54565. 1 hit.
    TIGRFAMsi TIGR00002. S16. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Ribosomal protein S16 from Thermus thermophilus."
      Rak A., Wolf-Watz M., Kalinin A., Garber M.B.
      Submitted (MAR-1998) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: VK1.
    2. "Another piece of the ribosome: solution structure of S16 and its location in the 30S subunit."
      Allard P., Rak A.V., Wimberly B.T., Clemons W.M. Jr., Kalinin A., Helgstrand M., Garber M.B., Ramakrishnan V., Haerd T.
      Structure 8:875-882(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY NMR.
      Strain: VK1.

    Entry informationi

    Entry nameiRS16_THETH
    AccessioniPrimary (citable) accession number: P80379
    Secondary accession number(s): Q9EVT6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1995
    Last sequence update: April 26, 2005
    Last modified: October 1, 2014
    This is version 87 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3