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P80379 (RS16_THETH) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 86. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S16
Gene names
Name:rpsP
Synonyms:rps16
OrganismThermus thermophilus
Taxonomic identifier274 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Protein attributes

Sequence length91 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Binds to the lower part of the body of the 30S subunit, where it stabilizes two of its domains. HAMAP-Rule MF_00385

Subunit structure

Part of the 30S ribosomal subunit.

Sequence similarities

Belongs to the ribosomal protein S16P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical term3D-structure
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 919130S ribosomal protein S16 HAMAP-Rule MF_00385
PRO_0000167270

Experimental info

Sequence conflict18 – 203Missing Ref.2

Secondary structure

............... 91
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P80379 [UniParc].

Last modified April 26, 2005. Version 3.
Checksum: 66019D66F0DC3FC0

FASTA9110,784
        10         20         30         40         50         60 
MVKIRLARFG SKHNPHYPHY RIVVTDARRK RDGKYIEKIG YYDPRKTTPD WLKVDVERAR 

        70         80         90 
YWLSVGAQPT DTARRLLRQA GVFRQEAREG A 

« Hide

References

[1]"Ribosomal protein S16 from Thermus thermophilus."
Rak A., Wolf-Watz M., Kalinin A., Garber M.B.
Submitted (MAR-1998) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: VK1.
[2]"Another piece of the ribosome: solution structure of S16 and its location in the 30S subunit."
Allard P., Rak A.V., Wimberly B.T., Clemons W.M. Jr., Kalinin A., Helgstrand M., Garber M.B., Ramakrishnan V., Haerd T.
Structure 8:875-882(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: STRUCTURE BY NMR.
Strain: VK1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ224859 Genomic DNA. Translation: CAC21226.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1EMWNMR-A1-70[»]
1TWTmodel-S1-91[»]
ProteinModelPortalP80379.
SMRP80379. Positions 1-91.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D3.30.1320.10. 1 hit.
HAMAPMF_00385. Ribosomal_S16.
InterProIPR000307. Ribosomal_S16.
IPR023803. Ribosomal_S16_dom.
[Graphical view]
PANTHERPTHR12919. PTHR12919. 1 hit.
PfamPF00886. Ribosomal_S16. 1 hit.
[Graphical view]
SUPFAMSSF54565. SSF54565. 1 hit.
TIGRFAMsTIGR00002. S16. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceP80379.

Entry information

Entry nameRS16_THETH
AccessionPrimary (citable) accession number: P80379
Secondary accession number(s): Q9EVT6
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: April 26, 2005
Last modified: July 9, 2014
This is version 86 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references