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Protein

30S ribosomal protein S16

Gene

rpsP

Organism
Thermus thermophilus
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Binds to the lower part of the body of the 30S subunit, where it stabilizes two of its domains.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S16UniRule annotation
Gene namesi
Name:rpsPUniRule annotation
Synonyms:rps16UniRule annotation
OrganismiThermus thermophilus
Taxonomic identifieri274 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001672701 – 9130S ribosomal protein S16Add BLAST91

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.

Structurei

Secondary structure

191
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi3 – 8Combined sources6
Beta strandi11 – 13Combined sources3
Beta strandi20 – 25Combined sources6
Beta strandi30 – 32Combined sources3
Beta strandi36 – 42Combined sources7
Beta strandi46 – 49Combined sources4
Helixi56 – 64Combined sources9

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1EMWNMR-A1-70[»]
1TWTmodel-S1-91[»]
ProteinModelPortaliP80379.
SMRiP80379.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP80379.

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial ribosomal protein bS16 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105K5M. Bacteria.
COG0228. LUCA.

Family and domain databases

Gene3Di3.30.1320.10. 1 hit.
HAMAPiMF_00385. Ribosomal_S16. 1 hit.
InterProiView protein in InterPro
IPR000307. Ribosomal_S16.
IPR023803. Ribosomal_S16_dom.
PANTHERiPTHR12919. PTHR12919. 1 hit.
PfamiView protein in Pfam
PF00886. Ribosomal_S16. 1 hit.
SUPFAMiSSF54565. SSF54565. 1 hit.
TIGRFAMsiTIGR00002. S16. 1 hit.

Sequencei

Sequence statusi: Complete.

P80379-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKIRLARFG SKHNPHYPHY RIVVTDARRK RDGKYIEKIG YYDPRKTTPD
60 70 80 90
WLKVDVERAR YWLSVGAQPT DTARRLLRQA GVFRQEAREG A
Length:91
Mass (Da):10,784
Last modified:April 26, 2005 - v3
Checksum:i66019D66F0DC3FC0
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti18 – 20Missing (PubMed:10997906).Curated3

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ224859 Genomic DNA. Translation: CAC21226.1.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRS16_THETH
AccessioniPrimary (citable) accession number: P80379
Secondary accession number(s): Q9EVT6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: April 26, 2005
Last modified: July 5, 2017
This is version 99 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families