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P80376

- RS11_THET8

UniProt

P80376 - RS11_THET8

Protein

30S ribosomal protein S11

Gene

rpsK

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Located on the upper part of the platform of the 30S subunit, where it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome, where it interacts both with the Shine-Dalgarno helix and mRNA.

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciTTHE300852:GH8R-1705-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S11
    Gene namesi
    Name:rpsK
    Synonyms:rps11
    Ordered Locus Names:TTHA1666
    OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
    Taxonomic identifieri300852 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000532: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11Removed1 Publication
    Chaini2 – 12912830S ribosomal protein S11PRO_0000123246Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to the C-terminus of IF-3; however exactly how IF-3 interacts with the 30S subunit is unclear. May contact the C-terminus of Era.

    Protein-protein interaction databases

    STRINGi300852.TTHA1666.

    Structurei

    Secondary structure

    1
    129
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi15 – 239
    Beta strandi24 – 263
    Beta strandi28 – 336
    Beta strandi35 – 373
    Beta strandi39 – 424
    Turni45 – 495
    Helixi53 – 564
    Helixi58 – 7316
    Turni74 – 763
    Beta strandi79 – 868
    Turni88 – 903
    Helixi91 – 999
    Beta strandi101 – 1077
    Beta strandi108 – 1103
    Helixi123 – 1253
    Turni126 – 1283

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1FJGX-ray3.00K1-129[»]
    1GIXX-ray5.50N1-129[»]
    1HNWX-ray3.40K1-129[»]
    1HNXX-ray3.40K1-129[»]
    1HNZX-ray3.30K1-129[»]
    1HR0X-ray3.20K1-129[»]
    1I94X-ray3.20K2-129[»]
    1I95X-ray4.50K2-129[»]
    1I96X-ray4.20K2-129[»]
    1I97X-ray4.50K2-129[»]
    1IBKX-ray3.31K1-129[»]
    1IBLX-ray3.11K1-129[»]
    1IBMX-ray3.31K1-129[»]
    1J5EX-ray3.05K1-129[»]
    1JGOX-ray5.60N1-129[»]
    1JGPX-ray7.00N1-129[»]
    1JGQX-ray5.00N1-129[»]
    1L1Umodel-K11-129[»]
    1ML5electron microscopy14.00N1-129[»]
    1N32X-ray3.00K1-129[»]
    1N33X-ray3.35K1-129[»]
    1N34X-ray3.80K1-129[»]
    1N36X-ray3.65K1-129[»]
    1PNSX-ray8.70K11-129[»]
    1PNXX-ray9.50K11-129[»]
    1X18electron microscopy13.50G11-129[»]
    1XMOX-ray3.25K1-129[»]
    1XMQX-ray3.00K1-129[»]
    1XNQX-ray3.05K1-129[»]
    1XNRX-ray3.10K1-129[»]
    1YL4X-ray5.50N1-129[»]
    2B64X-ray5.90K1-129[»]
    2B9MX-ray6.76K1-129[»]
    2B9OX-ray6.46K1-129[»]
    2E5LX-ray3.30K2-129[»]
    2F4VX-ray3.80K1-129[»]
    2HGIX-ray5.00N1-129[»]
    2HGPX-ray5.50N1-129[»]
    2HGRX-ray4.51N1-129[»]
    2HHHX-ray3.35K1-129[»]
    2J00X-ray2.80K2-129[»]
    2J02X-ray2.80K2-129[»]
    2OW8X-ray3.71l-[»]
    2UU9X-ray3.10K2-129[»]
    2UUAX-ray2.90K2-129[»]
    2UUBX-ray2.90K2-129[»]
    2UUCX-ray3.10K2-129[»]
    2UXBX-ray3.10K2-129[»]
    2UXCX-ray2.90K2-129[»]
    2UXDX-ray3.20K2-129[»]
    2V46X-ray3.50K2-129[»]
    2V48X-ray3.50K2-129[»]
    2VQEX-ray2.50K1-129[»]
    2VQFX-ray2.90K1-129[»]
    2WDGX-ray3.30K1-129[»]
    2WDHX-ray3.30K1-129[»]
    2WDKX-ray3.50K1-129[»]
    2WDMX-ray3.50K1-129[»]
    2WH1X-ray3.45K1-129[»]
    2WH3X-ray3.45K1-129[»]
    2WRIX-ray3.60K1-129[»]
    2WRKX-ray3.60K1-129[»]
    2WRNX-ray3.60K1-129[»]
    2WRQX-ray3.60K1-129[»]
    2X9RX-ray3.10K1-129[»]
    2X9TX-ray3.10K1-129[»]
    2XFZX-ray3.20K1-129[»]
    2XG1X-ray3.20K1-129[»]
    2XQDX-ray3.10K1-129[»]
    2XSYelectron microscopy7.80K1-129[»]
    2XUYelectron microscopy7.60K1-129[»]
    2Y0UX-ray3.10K1-129[»]
    2Y0WX-ray3.10K1-129[»]
    2Y0YX-ray3.10K1-129[»]
    2Y10X-ray3.10K1-129[»]
    2Y12X-ray3.10K1-129[»]
    2Y14X-ray3.10K1-129[»]
    2Y16X-ray3.10K1-129[»]
    2Y18X-ray3.10K1-129[»]
    2ZM6X-ray3.30K2-129[»]
    3FICelectron microscopy6.40K11-129[»]
    3HUWX-ray3.10K1-129[»]
    3HUYX-ray3.10K1-129[»]
    3I8GX-ray3.10N1-129[»]
    3I8HX-ray3.10N1-129[»]
    3I9BX-ray3.50N1-129[»]
    3I9DX-ray3.50N1-129[»]
    3KIQX-ray3.30k1-129[»]
    3KISX-ray3.30k1-129[»]
    3KIUX-ray3.60k1-129[»]
    3KIXX-ray3.60k1-129[»]
    3KNHX-ray3.00K1-129[»]
    3KNJX-ray3.15K1-129[»]
    3KNLX-ray3.45K1-129[»]
    3KNNX-ray3.45K1-129[»]
    3OGEX-ray3.00K1-129[»]
    3OGYX-ray3.00K1-129[»]
    3OHCX-ray3.00K1-129[»]
    3OHDX-ray3.00K1-129[»]
    3OHYX-ray3.00K1-129[»]
    3OI0X-ray3.00K1-129[»]
    3OI2X-ray3.10K1-129[»]
    3OI4X-ray3.10K1-129[»]
    3OTOX-ray3.69K1-129[»]
    3T1HX-ray3.11K1-129[»]
    3T1YX-ray2.80K1-129[»]
    3TVFX-ray3.10N1-129[»]
    3TVGX-ray3.10N1-129[»]
    3UXSX-ray3.20K1-129[»]
    3UXTX-ray3.20K1-129[»]
    3UYDX-ray3.00N1-129[»]
    3UYFX-ray3.00N1-129[»]
    3UZ3X-ray3.30N1-129[»]
    3UZ4X-ray3.30N1-129[»]
    3UZ6X-ray3.00N1-129[»]
    3UZ7X-ray3.00N1-129[»]
    3UZGX-ray3.30N1-129[»]
    3UZIX-ray3.30N1-129[»]
    3UZLX-ray3.30N1-129[»]
    3UZMX-ray3.30N1-129[»]
    3V22X-ray3.00K1-129[»]
    3V24X-ray3.00K1-129[»]
    3V26X-ray3.10K1-129[»]
    3V28X-ray3.10K1-129[»]
    3V2CX-ray2.70K1-129[»]
    3V2EX-ray2.70K1-129[»]
    3V6UX-ray3.90K1-129[»]
    3V6VX-ray3.90K1-129[»]
    3ZN7X-ray3.10K1-129[»]
    3ZNDX-ray3.10K1-129[»]
    3ZVOX-ray3.80K1-129[»]
    4ABRX-ray3.10K1-129[»]
    4AQYX-ray3.50K1-129[»]
    4B3MX-ray2.90K1-129[»]
    4B3RX-ray3.00K1-129[»]
    4B3SX-ray3.15K1-129[»]
    4B3TX-ray3.00K1-129[»]
    4B8FX-ray3.70K1-129[»]
    4B8HX-ray3.70K1-129[»]
    4BYBX-ray3.35K1-129[»]
    4BYDX-ray3.35K1-129[»]
    4CR1X-ray2.95K1-129[»]
    4DH9X-ray3.20K1-129[»]
    4DHBX-ray3.20K1-129[»]
    4DR1X-ray3.60K1-129[»]
    4DR2X-ray3.25K1-129[»]
    4DR3X-ray3.35K1-129[»]
    4DR4X-ray3.97K1-129[»]
    4DR5X-ray3.45K1-129[»]
    4DR6X-ray3.30K1-129[»]
    4DR7X-ray3.75K1-129[»]
    4DUYX-ray3.39K1-129[»]
    4DUZX-ray3.65K1-129[»]
    4DV0X-ray3.85K1-129[»]
    4DV1X-ray3.85K1-129[»]
    4DV2X-ray3.65K1-129[»]
    4DV3X-ray3.55K1-129[»]
    4DV4X-ray3.65K1-129[»]
    4DV5X-ray3.68K1-129[»]
    4DV6X-ray3.30K1-129[»]
    4DV7X-ray3.29K1-129[»]
    4EJ9X-ray3.52K1-129[»]
    4EJAX-ray3.52K1-129[»]
    4G5KX-ray3.30N1-129[»]
    4G5MX-ray3.30N1-129[»]
    4G5TX-ray3.10N1-129[»]
    4G5VX-ray3.10N1-129[»]
    4GKJX-ray3.30K11-129[»]
    4GKKX-ray3.20K11-129[»]
    4JI0X-ray3.49K1-129[»]
    4JI1X-ray3.14K1-129[»]
    4JI2X-ray3.64K1-129[»]
    4JI3X-ray3.35K1-129[»]
    4JI4X-ray3.69K1-129[»]
    4JI5X-ray3.85K1-129[»]
    4JI6X-ray3.55K1-129[»]
    4JI7X-ray3.50K1-129[»]
    4JI8X-ray3.74K1-129[»]
    4JUWX-ray2.86K11-129[»]
    4JV5X-ray3.16K11-129[»]
    4JYAX-ray3.10K11-129[»]
    4K0KX-ray3.40K11-129[»]
    4K0LX-ray3.30K11-129[»]
    4K0PX-ray3.30K11-129[»]
    4KHPX-ray3.10K11-129[»]
    4NVUX-ray3.00K1-129[»]
    4NVWX-ray3.00K1-129[»]
    4NVYX-ray3.10K1-129[»]
    4NW0X-ray3.10K1-129[»]
    4NXMX-ray3.65K1-129[»]
    4NXNX-ray3.54K1-129[»]
    4OX9X-ray3.80K1-129[»]
    ProteinModelPortaliP80376.
    SMRiP80376. Positions 7-129.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP80376.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S11P family.Curated

    Phylogenomic databases

    eggNOGiCOG0100.
    HOGENOMiHOG000111597.
    KOiK02948.
    OMAiHISASFN.
    OrthoDBiEOG6ZSPF3.
    PhylomeDBiP80376.

    Family and domain databases

    Gene3Di3.30.420.80. 1 hit.
    HAMAPiMF_01310. Ribosomal_S11.
    InterProiIPR001971. Ribosomal_S11.
    IPR019981. Ribosomal_S11_bac-type.
    IPR018102. Ribosomal_S11_CS.
    [Graphical view]
    PANTHERiPTHR11759. PTHR11759. 1 hit.
    PfamiPF00411. Ribosomal_S11. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002131. Ribosomal_S11. 1 hit.
    TIGRFAMsiTIGR03632. bact_S11. 1 hit.
    PROSITEiPS00054. RIBOSOMAL_S11. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P80376-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAKKPSKKKV KRQVASGRAY IHASYNNTIV TITDPDGNPI TWSSGGVIGY    50
    KGSRKGTPYA AQLAALDAAK KAMAYGMQSV DVIVRGTGAG REQAIRALQA 100
    SGLQVKSIVD DTPVPHNGCR PKKKFRKAS 129
    Length:129
    Mass (Da):13,713
    Last modified:January 23, 2007 - v3
    Checksum:i028E047E6DCE3CA2
    GO

    Mass spectrometryi

    Molecular mass is 13583 Da from positions 2 - 129. Determined by MALDI. 1 Publication

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB024328 Genomic DNA. Translation: BAA75547.1.
    AP008226 Genomic DNA. Translation: BAD71489.1.
    RefSeqiYP_144932.1. NC_006461.1.

    Genome annotation databases

    EnsemblBacteriaiBAD71489; BAD71489; BAD71489.
    GeneIDi3168024.
    KEGGittj:TTHA1666.
    PATRICi23958287. VBITheThe93045_1636.

    Cross-referencesi

    Web resourcesi

    T.thermophilus ribosome structure and function

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB024328 Genomic DNA. Translation: BAA75547.1 .
    AP008226 Genomic DNA. Translation: BAD71489.1 .
    RefSeqi YP_144932.1. NC_006461.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1FJG X-ray 3.00 K 1-129 [» ]
    1GIX X-ray 5.50 N 1-129 [» ]
    1HNW X-ray 3.40 K 1-129 [» ]
    1HNX X-ray 3.40 K 1-129 [» ]
    1HNZ X-ray 3.30 K 1-129 [» ]
    1HR0 X-ray 3.20 K 1-129 [» ]
    1I94 X-ray 3.20 K 2-129 [» ]
    1I95 X-ray 4.50 K 2-129 [» ]
    1I96 X-ray 4.20 K 2-129 [» ]
    1I97 X-ray 4.50 K 2-129 [» ]
    1IBK X-ray 3.31 K 1-129 [» ]
    1IBL X-ray 3.11 K 1-129 [» ]
    1IBM X-ray 3.31 K 1-129 [» ]
    1J5E X-ray 3.05 K 1-129 [» ]
    1JGO X-ray 5.60 N 1-129 [» ]
    1JGP X-ray 7.00 N 1-129 [» ]
    1JGQ X-ray 5.00 N 1-129 [» ]
    1L1U model - K 11-129 [» ]
    1ML5 electron microscopy 14.00 N 1-129 [» ]
    1N32 X-ray 3.00 K 1-129 [» ]
    1N33 X-ray 3.35 K 1-129 [» ]
    1N34 X-ray 3.80 K 1-129 [» ]
    1N36 X-ray 3.65 K 1-129 [» ]
    1PNS X-ray 8.70 K 11-129 [» ]
    1PNX X-ray 9.50 K 11-129 [» ]
    1X18 electron microscopy 13.50 G 11-129 [» ]
    1XMO X-ray 3.25 K 1-129 [» ]
    1XMQ X-ray 3.00 K 1-129 [» ]
    1XNQ X-ray 3.05 K 1-129 [» ]
    1XNR X-ray 3.10 K 1-129 [» ]
    1YL4 X-ray 5.50 N 1-129 [» ]
    2B64 X-ray 5.90 K 1-129 [» ]
    2B9M X-ray 6.76 K 1-129 [» ]
    2B9O X-ray 6.46 K 1-129 [» ]
    2E5L X-ray 3.30 K 2-129 [» ]
    2F4V X-ray 3.80 K 1-129 [» ]
    2HGI X-ray 5.00 N 1-129 [» ]
    2HGP X-ray 5.50 N 1-129 [» ]
    2HGR X-ray 4.51 N 1-129 [» ]
    2HHH X-ray 3.35 K 1-129 [» ]
    2J00 X-ray 2.80 K 2-129 [» ]
    2J02 X-ray 2.80 K 2-129 [» ]
    2OW8 X-ray 3.71 l - [» ]
    2UU9 X-ray 3.10 K 2-129 [» ]
    2UUA X-ray 2.90 K 2-129 [» ]
    2UUB X-ray 2.90 K 2-129 [» ]
    2UUC X-ray 3.10 K 2-129 [» ]
    2UXB X-ray 3.10 K 2-129 [» ]
    2UXC X-ray 2.90 K 2-129 [» ]
    2UXD X-ray 3.20 K 2-129 [» ]
    2V46 X-ray 3.50 K 2-129 [» ]
    2V48 X-ray 3.50 K 2-129 [» ]
    2VQE X-ray 2.50 K 1-129 [» ]
    2VQF X-ray 2.90 K 1-129 [» ]
    2WDG X-ray 3.30 K 1-129 [» ]
    2WDH X-ray 3.30 K 1-129 [» ]
    2WDK X-ray 3.50 K 1-129 [» ]
    2WDM X-ray 3.50 K 1-129 [» ]
    2WH1 X-ray 3.45 K 1-129 [» ]
    2WH3 X-ray 3.45 K 1-129 [» ]
    2WRI X-ray 3.60 K 1-129 [» ]
    2WRK X-ray 3.60 K 1-129 [» ]
    2WRN X-ray 3.60 K 1-129 [» ]
    2WRQ X-ray 3.60 K 1-129 [» ]
    2X9R X-ray 3.10 K 1-129 [» ]
    2X9T X-ray 3.10 K 1-129 [» ]
    2XFZ X-ray 3.20 K 1-129 [» ]
    2XG1 X-ray 3.20 K 1-129 [» ]
    2XQD X-ray 3.10 K 1-129 [» ]
    2XSY electron microscopy 7.80 K 1-129 [» ]
    2XUY electron microscopy 7.60 K 1-129 [» ]
    2Y0U X-ray 3.10 K 1-129 [» ]
    2Y0W X-ray 3.10 K 1-129 [» ]
    2Y0Y X-ray 3.10 K 1-129 [» ]
    2Y10 X-ray 3.10 K 1-129 [» ]
    2Y12 X-ray 3.10 K 1-129 [» ]
    2Y14 X-ray 3.10 K 1-129 [» ]
    2Y16 X-ray 3.10 K 1-129 [» ]
    2Y18 X-ray 3.10 K 1-129 [» ]
    2ZM6 X-ray 3.30 K 2-129 [» ]
    3FIC electron microscopy 6.40 K 11-129 [» ]
    3HUW X-ray 3.10 K 1-129 [» ]
    3HUY X-ray 3.10 K 1-129 [» ]
    3I8G X-ray 3.10 N 1-129 [» ]
    3I8H X-ray 3.10 N 1-129 [» ]
    3I9B X-ray 3.50 N 1-129 [» ]
    3I9D X-ray 3.50 N 1-129 [» ]
    3KIQ X-ray 3.30 k 1-129 [» ]
    3KIS X-ray 3.30 k 1-129 [» ]
    3KIU X-ray 3.60 k 1-129 [» ]
    3KIX X-ray 3.60 k 1-129 [» ]
    3KNH X-ray 3.00 K 1-129 [» ]
    3KNJ X-ray 3.15 K 1-129 [» ]
    3KNL X-ray 3.45 K 1-129 [» ]
    3KNN X-ray 3.45 K 1-129 [» ]
    3OGE X-ray 3.00 K 1-129 [» ]
    3OGY X-ray 3.00 K 1-129 [» ]
    3OHC X-ray 3.00 K 1-129 [» ]
    3OHD X-ray 3.00 K 1-129 [» ]
    3OHY X-ray 3.00 K 1-129 [» ]
    3OI0 X-ray 3.00 K 1-129 [» ]
    3OI2 X-ray 3.10 K 1-129 [» ]
    3OI4 X-ray 3.10 K 1-129 [» ]
    3OTO X-ray 3.69 K 1-129 [» ]
    3T1H X-ray 3.11 K 1-129 [» ]
    3T1Y X-ray 2.80 K 1-129 [» ]
    3TVF X-ray 3.10 N 1-129 [» ]
    3TVG X-ray 3.10 N 1-129 [» ]
    3UXS X-ray 3.20 K 1-129 [» ]
    3UXT X-ray 3.20 K 1-129 [» ]
    3UYD X-ray 3.00 N 1-129 [» ]
    3UYF X-ray 3.00 N 1-129 [» ]
    3UZ3 X-ray 3.30 N 1-129 [» ]
    3UZ4 X-ray 3.30 N 1-129 [» ]
    3UZ6 X-ray 3.00 N 1-129 [» ]
    3UZ7 X-ray 3.00 N 1-129 [» ]
    3UZG X-ray 3.30 N 1-129 [» ]
    3UZI X-ray 3.30 N 1-129 [» ]
    3UZL X-ray 3.30 N 1-129 [» ]
    3UZM X-ray 3.30 N 1-129 [» ]
    3V22 X-ray 3.00 K 1-129 [» ]
    3V24 X-ray 3.00 K 1-129 [» ]
    3V26 X-ray 3.10 K 1-129 [» ]
    3V28 X-ray 3.10 K 1-129 [» ]
    3V2C X-ray 2.70 K 1-129 [» ]
    3V2E X-ray 2.70 K 1-129 [» ]
    3V6U X-ray 3.90 K 1-129 [» ]
    3V6V X-ray 3.90 K 1-129 [» ]
    3ZN7 X-ray 3.10 K 1-129 [» ]
    3ZND X-ray 3.10 K 1-129 [» ]
    3ZVO X-ray 3.80 K 1-129 [» ]
    4ABR X-ray 3.10 K 1-129 [» ]
    4AQY X-ray 3.50 K 1-129 [» ]
    4B3M X-ray 2.90 K 1-129 [» ]
    4B3R X-ray 3.00 K 1-129 [» ]
    4B3S X-ray 3.15 K 1-129 [» ]
    4B3T X-ray 3.00 K 1-129 [» ]
    4B8F X-ray 3.70 K 1-129 [» ]
    4B8H X-ray 3.70 K 1-129 [» ]
    4BYB X-ray 3.35 K 1-129 [» ]
    4BYD X-ray 3.35 K 1-129 [» ]
    4CR1 X-ray 2.95 K 1-129 [» ]
    4DH9 X-ray 3.20 K 1-129 [» ]
    4DHB X-ray 3.20 K 1-129 [» ]
    4DR1 X-ray 3.60 K 1-129 [» ]
    4DR2 X-ray 3.25 K 1-129 [» ]
    4DR3 X-ray 3.35 K 1-129 [» ]
    4DR4 X-ray 3.97 K 1-129 [» ]
    4DR5 X-ray 3.45 K 1-129 [» ]
    4DR6 X-ray 3.30 K 1-129 [» ]
    4DR7 X-ray 3.75 K 1-129 [» ]
    4DUY X-ray 3.39 K 1-129 [» ]
    4DUZ X-ray 3.65 K 1-129 [» ]
    4DV0 X-ray 3.85 K 1-129 [» ]
    4DV1 X-ray 3.85 K 1-129 [» ]
    4DV2 X-ray 3.65 K 1-129 [» ]
    4DV3 X-ray 3.55 K 1-129 [» ]
    4DV4 X-ray 3.65 K 1-129 [» ]
    4DV5 X-ray 3.68 K 1-129 [» ]
    4DV6 X-ray 3.30 K 1-129 [» ]
    4DV7 X-ray 3.29 K 1-129 [» ]
    4EJ9 X-ray 3.52 K 1-129 [» ]
    4EJA X-ray 3.52 K 1-129 [» ]
    4G5K X-ray 3.30 N 1-129 [» ]
    4G5M X-ray 3.30 N 1-129 [» ]
    4G5T X-ray 3.10 N 1-129 [» ]
    4G5V X-ray 3.10 N 1-129 [» ]
    4GKJ X-ray 3.30 K 11-129 [» ]
    4GKK X-ray 3.20 K 11-129 [» ]
    4JI0 X-ray 3.49 K 1-129 [» ]
    4JI1 X-ray 3.14 K 1-129 [» ]
    4JI2 X-ray 3.64 K 1-129 [» ]
    4JI3 X-ray 3.35 K 1-129 [» ]
    4JI4 X-ray 3.69 K 1-129 [» ]
    4JI5 X-ray 3.85 K 1-129 [» ]
    4JI6 X-ray 3.55 K 1-129 [» ]
    4JI7 X-ray 3.50 K 1-129 [» ]
    4JI8 X-ray 3.74 K 1-129 [» ]
    4JUW X-ray 2.86 K 11-129 [» ]
    4JV5 X-ray 3.16 K 11-129 [» ]
    4JYA X-ray 3.10 K 11-129 [» ]
    4K0K X-ray 3.40 K 11-129 [» ]
    4K0L X-ray 3.30 K 11-129 [» ]
    4K0P X-ray 3.30 K 11-129 [» ]
    4KHP X-ray 3.10 K 11-129 [» ]
    4NVU X-ray 3.00 K 1-129 [» ]
    4NVW X-ray 3.00 K 1-129 [» ]
    4NVY X-ray 3.10 K 1-129 [» ]
    4NW0 X-ray 3.10 K 1-129 [» ]
    4NXM X-ray 3.65 K 1-129 [» ]
    4NXN X-ray 3.54 K 1-129 [» ]
    4OX9 X-ray 3.80 K 1-129 [» ]
    ProteinModelPortali P80376.
    SMRi P80376. Positions 7-129.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 300852.TTHA1666.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAD71489 ; BAD71489 ; BAD71489 .
    GeneIDi 3168024.
    KEGGi ttj:TTHA1666.
    PATRICi 23958287. VBITheThe93045_1636.

    Phylogenomic databases

    eggNOGi COG0100.
    HOGENOMi HOG000111597.
    KOi K02948.
    OMAi HISASFN.
    OrthoDBi EOG6ZSPF3.
    PhylomeDBi P80376.

    Enzyme and pathway databases

    BioCyci TTHE300852:GH8R-1705-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei P80376.

    Family and domain databases

    Gene3Di 3.30.420.80. 1 hit.
    HAMAPi MF_01310. Ribosomal_S11.
    InterProi IPR001971. Ribosomal_S11.
    IPR019981. Ribosomal_S11_bac-type.
    IPR018102. Ribosomal_S11_CS.
    [Graphical view ]
    PANTHERi PTHR11759. PTHR11759. 1 hit.
    Pfami PF00411. Ribosomal_S11. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002131. Ribosomal_S11. 1 hit.
    TIGRFAMsi TIGR03632. bact_S11. 1 hit.
    PROSITEi PS00054. RIBOSOMAL_S11. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Cloning of the RNA polymerase alpha subunit gene from Thermus thermophilus HB8 and characterization of the protein."
      Wada T., Yamazaki T., Kuramitsu S., Kyogoku Y.
      J. Biochem. 125:143-150(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Complete genome sequence of Thermus thermophilus HB8."
      Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.
      Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB8 / ATCC 27634 / DSM 579.
    3. "Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus."
      Tsiboli P., Herfurth E., Choli T.
      Eur. J. Biochem. 226:169-177(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: PROTEIN SEQUENCE OF 2-26.
    4. "Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry."
      Suh M.-J., Hamburg D.M., Gregory S.T., Dahlberg A.E., Limbach P.A.
      Proteomics 5:4818-4831(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: MASS SPECTROMETRY.
    5. Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.
    6. "Structure of functionally activated small ribosomal subunit at 3.3 A resolution."
      Schluenzen F., Tocilj A., Zarivach R., Harms J., Gluehmann M., Janell D., Bashan A., Bartels H., Agmon I., Franceschi F., Yonath A.
      Cell 102:615-623(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
    7. "The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit."
      Brodersen D.E., Clemons W.M. Jr., Carter A.P., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
      Cell 103:1143-1154(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
    8. "Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics."
      Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
      Nature 407:340-348(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.0 ANGSTROMS) OF THE 30S SUBUNIT.
    9. "The path of messenger RNA through the ribosome."
      Yusupova G.Z., Yusupov M.M., Cate J.H.D., Noller H.F.
      Cell 106:233-241(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (5.0 ANGSTROMS) OF THE RIBOSOME.
    10. "Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3."
      Pioletti M., Schluenzen F., Harms J., Zarivach R., Gluehmann M., Avila H., Bashan A., Bartels H., Auerbach T., Jacobi C., Hartsch T., Yonath A., Franceschi F.
      EMBO J. 20:1829-1839(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
    11. "Crystal structure of an initiation factor bound to the 30S ribosomal subunit."
      Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Hartsch T., Wimberly B.T., Ramakrishnan V.
      Science 291:498-501(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
    12. Cited for: X-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE RIBOSOME.
    13. "Recognition of cognate transfer RNA by the 30S ribosomal subunit."
      Ogle J.M., Brodersen D.E., Clemons W.M. Jr., Tarry M.J., Carter A.P., Ramakrishnan V.
      Science 292:897-902(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.11 ANGSTROMS) OF THE 30S SUBUNIT.
    14. "Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA."
      Brodersen D.E., Clemons W.M. Jr., Carter A.P., Wimberly B.T., Ramakrishnan V.
      J. Mol. Biol. 316:725-768(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.
    15. "Interaction of Era with the 30S ribosomal subunit implications for 30S subunit assembly."
      Sharma M.R., Barat C., Wilson D.N., Booth T.M., Kawazoe M., Hori-Takemoto C., Shirouzu M., Yokoyama S., Fucini P., Agrawal R.K.
      Mol. Cell 18:319-329(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (13.50 ANGSTROMS), POSSIBLE INTERACTION WITH ERA.

    Entry informationi

    Entry nameiRS11_THET8
    AccessioniPrimary (citable) accession number: P80376
    Secondary accession number(s): Q5SHR4, Q9RA66
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1995
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 120 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3